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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4005154..4006303+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004121-T1 ID=KJC3_004121-T1|Name=KJC3_004121-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1150bp|location=Sequence derived from alignment at ch3:4005154..4006303+ (Aspergillus niger KJC3)
CCAGACATTGAATACGATCAAGGCCAAACGATTTAAACGCCATGAAAAAG
TCGCAGCTACTACGATTGACCACAGATTAACCTTTCATTTTCTAGTGGCC
ATATTTATCCATACAACAAAATGGAATACCAACGCCTCGGCAAAAGCGGC
CTCAAGACCTCCAAAATCATCCTCGGATGTATGACCTTTGGCAATCCCGC
ATGGGAAGGCAGTCCCTGGGTGCTCCCCCAAGACGAAGCGCTCCCCTTAC
TCAAAAAAGCCTTTGACAACGGGATCAACACTTGGGACACAGCGAACACT
TACTCTAACGGGACATCAGAGATCCTAATCGGAAAAGCCTTAAATAAATA
CAACATCCCGCGAAGCAGGGTAGTGATTATGACGAAGCTATACTATCCAG
TCTTCGACCCTGATTCCCCATCGAGACCTAATCCCGCCATCAACGACGGT
GAGCTAGTGAATCAAATGGGCCTAAGTCGAAAACACATCTTCGACGCGGT
TGAAGGGTCACTCGCGCGCCTGAACACGACGTATATCGATGTTCTGCAAC
TACACCGACTGGACGATACAGAAGCAGAGGAAATCATGTGTGCACTGCAT
GATCTCGTCCGAATGGGCAAGGTTCATTATCTGGGTGCGTCAAGCATGTA
CTGTTGGCAGCTGGCGAGGTTGCAGTATGCAGCGAAGATGAATAATTGGA
CGACGTTTACTAGTATGCAGGGGCTTTGGAACTTGCTTTATCGGGAGGAG
GAGCGAGAGGTTAATGCGTTTTGCAGGGCTGAGGGGATTGGGTTGATTCC
TTGGAGTCCATTGGCTCGTGGGTTGTTGGCTAGGCCGTGGAATGCGCAGA
CGTATCGGTCTAGTCAGGATAAAAAGACGGTTAAGTGGTTCTCAGGGACA
CAGAATGAGGTTATTGTTTCACGGGTGGAGCAGTTGGCGAAATCGAAAGG
GTGCAGTATGAGTGCTATTGCTATTGCGTGGTTGTTGAAGAAGGGGGCGT
GTCCGATTGTCGGGTTGAATAGCATGGAGAGGATAGAGTCGGCGGCCGAG
GCATTGGGTGTTCAATTGTCCGATGAAGATGTTAGGTTACTTGAGGAAGA
GTATAGACCTCTTCCTGTCGAGGCTATATAGTTACATTAGATGAAGGGGT
back to topCoding sequence (CDS) from alignment at ch3:4005154..4006303+ >KJC3_004121-T1 ID=KJC3_004121-T1|Name=KJC3_004121-T1|organism=Aspergillus niger KJC3|type=CDS|length=1011bp|location=Sequence derived from alignment at ch3:4005154..4006303+ (Aspergillus niger KJC3)
ATGGAATACCAACGCCTCGGCAAAAGCGGCCTCAAGACCTCCAAAATCAT
CCTCGGATGTATGACCTTTGGCAATCCCGCATGGGAAGGCAGTCCCTGGG
TGCTCCCCCAAGACGAAGCGCTCCCCTTACTCAAAAAAGCCTTTGACAAC
GGGATCAACACTTGGGACACAGCGAACACTTACTCTAACGGGACATCAGA
GATCCTAATCGGAAAAGCCTTAAATAAATACAACATCCCGCGAAGCAGGG
TAGTGATTATGACGAAGCTATACTATCCAGTCTTCGACCCTGATTCCCCA
TCGAGACCTAATCCCGCCATCAACGACGGTGAGCTAGTGAATCAAATGGG
CCTAAGTCGAAAACACATCTTCGACGCGGTTGAAGGGTCACTCGCGCGCC
TGAACACGACGTATATCGATGTTCTGCAACTACACCGACTGGACGATACA
GAAGCAGAGGAAATCATGTGTGCACTGCATGATCTCGTCCGAATGGGCAA
GGTTCATTATCTGGGTGCGTCAAGCATGTACTGTTGGCAGCTGGCGAGGT
TGCAGTATGCAGCGAAGATGAATAATTGGACGACGTTTACTAGTATGCAG
GGGCTTTGGAACTTGCTTTATCGGGAGGAGGAGCGAGAGGTTAATGCGTT
TTGCAGGGCTGAGGGGATTGGGTTGATTCCTTGGAGTCCATTGGCTCGTG
GGTTGTTGGCTAGGCCGTGGAATGCGCAGACGTATCGGTCTAGTCAGGAT
AAAAAGACGGTTAAGTGGTTCTCAGGGACACAGAATGAGGTTATTGTTTC
ACGGGTGGAGCAGTTGGCGAAATCGAAAGGGTGCAGTATGAGTGCTATTG
CTATTGCGTGGTTGTTGAAGAAGGGGGCGTGTCCGATTGTCGGGTTGAAT
AGCATGGAGAGGATAGAGTCGGCGGCCGAGGCATTGGGTGTTCAATTGTC
CGATGAAGATGTTAGGTTACTTGAGGAAGAGTATAGACCTCTTCCTGTCG
AGGCTATATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004121-T1.utr5p1 | KJC3_004121-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004121-T1.utr3p1 | KJC3_004121-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.7 |
| Note | SMCOG1039:aldo/keto reductase family oxidoreductase |
| DBxref | InterPro:IPR023210 |
| DBxref | InterPro:IPR036812 |
| DBxref | PFAM:PF00248 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4005154..4006303 + |
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