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KJC3_004148-T1, KJC3_004148-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004148-T1
Unique NameKJC3_004148-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4063298..4064767-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004148-T1 ID=KJC3_004148-T1|Name=KJC3_004148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1470bp|location=Sequence derived from alignment at ch3:4063298..4064767- (Aspergillus niger KJC3)
ACCTCAGCAGGCACAGTGCTGGCACGTTATGCACGGCTATGCGCCCCACG
AATCCCGCTGCGGCCGATGCCTGACAATCGAGTCAGCAGTCTTGTGGATC
ATCTTCGACCAACTTCCAGACCCATGTGAAGAGCTATTTTAAGACCTCTC
GTTAATGTCATATGGATTCAAGTCGCTTATAATCAGCTCTTGATTTGCTT
TCTTGTTCTCTCTAACATCCCTCTTCTCCCTCCCCTCCATCCACCATGTC
TCTCACCCTCAAGCTCTCCTCCCTTGTCATCCGCACCTTGTCAAAGCCGA
TCGCCGTACGCTTAGTCCACCCTTGCAGTGATGTGCTGCTGACAGGAACT
GACTGACACCCCAAAGAACCAAATCAAGGCCCAGGCTCGCGAACATGAAC
GCTTCCGGCGCATCTGCGTCTCCATGGCGCAAGGTCTCCACCGTATCGAC
ATGCGTCTCCGGCTAGGCAACATCCGCGACAACGCCGCATCGCAAAAACG
AGCTGCTGCTGAAAGGGAGCTCCGAAAACACAAACCCACATCCCCAACGG
TCAAGACGGAAGTAGAGGCCAAAGCGGAAGAGGAAGCCATTGCGAAAGCC
AAAGCAGCGGCAGAGGAGGCAGCGAAGCCGGCACCGAAACCTCATATTCG
ACCGTTGTCGGAGTCCAAGGCAATCGAGTCTGGTGCCACATTCATCAGCG
AAACATTCTTGTTTATAGTTGCAGGAGGGCTGATTGTTTTTGAGTCGTGG
CGGTCGCGGAGAAAGGAAACAACCCGCAGGGAGGATGTTGAGACTCGATT
GGCCGAGCTGGAGCAGTCTGAGAAGGCCGCTCGGCTAGCACTGTTGGCCT
TGGAGAAGGAGCTGCTCCAGCAGAAAGCCAAGCACGGGGAACTTCCAAAG
TCCTCCTCGAGGATCCTACCTCGTGAGGTGTGGGACGTAAATCAAGAGGA
CGAAGTGAAACCAGCCGAGGAGCCGGGTTTGCTCTCCTGGATTACGTCGT
ATCTGCCTTGGGGGGAAAGTCCGGAACAACGGGCAGAGTCTGTGATCAAG
GAAAGTAAGGGCGCAGCGAAGCCATCAGCTGATGCACCATCATCACCGGC
ATCGAAACCAGCCGAACCTGAACCGAAAGCGCCAGAGTCGAAAAAAGCTT
GATCGATGCCAGTATTGGATTTATGCACCTGTATATATTGTTATAGATCA
GTTGGGGCACTATGTGGAGGATTATCTTGTTAATTATGTAGCGATACCCT
TATACATGACGGAAAGAGGAAGGCAAGGCACGCAGAGGTTGGTTTCGGAG
CGACAAGCGGAGGCATATAGATATAATCCACTCCTCTCTTCATTGAGCTT
ACTTTTCACATACCCATAGCCAAGTTCGAATACTACACAGGATGGAGCCC
GTCGAGCGGGTTTCACTTCGAGGCACCTACTGCTCTTCACTCCAAGATCA
ATCCTTATGGAAAATGCTTG
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Coding sequence (CDS) from alignment at ch3:4063298..4064767-

>KJC3_004148-T1 ID=KJC3_004148-T1|Name=KJC3_004148-T1|organism=Aspergillus niger KJC3|type=CDS|length=1692bp|location=Sequence derived from alignment at ch3:4063298..4064767- (Aspergillus niger KJC3)
AACCAAATCAAGGCCCAGGCTCGCGAACATGAACGCTTCCGGCGCATCTG
CGTCTCCATGGCGCAAGGTCTCCACCGTATCGACATGCGTCTCCGGCTAG
GCAACATCCGCGACAACGCCGCATCGCAAAAACGAGCTGCTGCTGAAAGG
GAGCTCCGAAAACACAAACCCACATCCCCAACGGTCAAGACGGAAGTAGA
GGCCAAAGCGGAAGAGGAAGCCATTGCGAAAGCCAAAGCAGCGGCAGAGG
AGGCAGCGAAGCCGGCACCGAAACCTCATATTCGACCGTTGTCGGAGTCC
AAGGCAATCGAGTCTGGTGCCACATTCATCAGCGAAACATTCTTGTTTAT
AGTTGCAGGAGGGCTGATTGTTTTTGAGTCGTGGCGGTCGCGGAGAAAGG
AAACAACCCGCAGGGAGGATGTTGAGACTCGATTGGCCGAGCTGGAGCAG
TCTGAGAAGGCCGCTCGGCTAGCACTGTTGGCCTTGGAGAAGGAGCTGCT
CCAGCAGAAAGCCAAGCACGGGGAACTTCCAAAGTCCTCCTCGAGGATCC
TACCTCGTGAGGTGTGGGACGTAAATCAAGAGGACGAAGTGAAACCAGCC
GAGGAGCCGGGTTTGCTCTCCTGGATTACGTCGTATCTGCCTTGGGGGGA
AAGTCCGGAACAACGGGCAGAGTCTGTGATCAAGGAAAGTAAGGGCGCAG
CGAAGCCATCAGCTGATGCACCATCATCACCGGCATCGAAACCAGCCGAA
CCTGAACCGAAAGCGCCAGAGTCGAAAAAAGCTTGAATGTCTCTCACCCT
CAAGCTCTCCTCCCTTGTCATCCGCACCTTGTCAAAGCCGATCGCCAACC
AAATCAAGGCCCAGGCTCGCGAACATGAACGCTTCCGGCGCATCTGCGTC
TCCATGGCGCAAGGTCTCCACCGTATCGACATGCGTCTCCGGCTAGGCAA
CATCCGCGACAACGCCGCATCGCAAAAACGAGCTGCTGCTGAAAGGGAGC
TCCGAAAACACAAACCCACATCCCCAACGGTCAAGACGGAAGTAGAGGCC
AAAGCGGAAGAGGAAGCCATTGCGAAAGCCAAAGCAGCGGCAGAGGAGGC
AGCGAAGCCGGCACCGAAACCTCATATTCGACCGTTGTCGGAGTCCAAGG
CAATCGAGTCTGGTGCCACATTCATCAGCGAAACATTCTTGTTTATAGTT
GCAGGAGGGCTGATTGTTTTTGAGTCGTGGCGGTCGCGGAGAAAGGAAAC
AACCCGCAGGGAGGATGTTGAGACTCGATTGGCCGAGCTGGAGCAGTCTG
AGAAGGCCGCTCGGCTAGCACTGTTGGCCTTGGAGAAGGAGCTGCTCCAG
CAGAAAGCCAAGCACGGGGAACTTCCAAAGTCCTCCTCGAGGATCCTACC
TCGTGAGGTGTGGGACGTAAATCAAGAGGACGAAGTGAAACCAGCCGAGG
AGCCGGGTTTGCTCTCCTGGATTACGTCGTATCTGCCTTGGGGGGAAAGT
CCGGAACAACGGGCAGAGTCTGTGATCAAGGAAAGTAAGGGCGCAGCGAA
GCCATCAGCTGATGCACCATCATCACCGGCATCGAAACCAGCCGAACCTG
AACCGAAAGCGCCAGAGTCGAAAAAAGCTTGAATGTCTCTCACCCTCAAG
CTCTCCTCCCTTGTCATCCGCACCTTGTCAAAGCCGATCGCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004148KJC3_004148Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004148-T1KJC3_004148-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004148-T1.cdsKJC3_004148-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004148-T1.utr3p1KJC3_004148-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004148-T1.exon2KJC3_004148-T1.exon2Aspergillus niger KJC3exon
KJC3_004148-T1.exon1KJC3_004148-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004148-T1.utr5p1KJC3_004148-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010754
DBxrefPFAM:PF07047
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4063298..4064767 -
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