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KJC3_004150-T1, KJC3_004150-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004150-T1
Unique NameKJC3_004150-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4069708..4071103+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004150-T1 ID=KJC3_004150-T1|Name=KJC3_004150-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1396bp|location=Sequence derived from alignment at ch3:4069708..4071103+ (Aspergillus niger KJC3)
ATGAACCTCGCTCATACTTTGATCCGCCTTGGTATTTCTCTTTGCCCTTG
GAAGCTATTCTACCTTCTATTGACCTACTACCTATGCCAATGCCTCGCAG
AATGACTGGATTGCGTATCAAAATAGCACAGTGCTCAATCCCTCCTCCGA
CGGGGTGACCCCCGCCATAATAATCCTAGACTATGGACGAGATGTCGAAA
GATATGCCATCTTCCAGATTTCACATATGTCCGGAGACACCCAGACTTCT
CGGCTCTTACCAGCTGACGCCGGGCTTCTTTATCCCGAATGCAAGATTAA
GCAGCCCCCTCGAACCAAAGATGTTCAGGCAAACACGACCGGTCTAATTG
GATACTCGTTCAATCTGCTGAGTGCAATGGCCAAGCTTTACGAGCAGACA
GGAGATGAAGTGTTTCTGCATCGTTGGGCTCCGAAAGCAGTGCGCATGCT
TGATTGGGCGTACTCTCAAACCCTACCAAATCACTTGCTCAACATCACCG
ATCCCGGCCTTGGTGGGGGATGGGACTACTCTGATCCTACCTCGTCCGGG
ATTGTCACCCAATTCAACATCTTGTACGCCTACTCGCTGAAGAAATGGAT
TTCGTATCTATCGCAGGCAAATATTAATGCCACTATGTATCAGAGACGGC
TGAACAACCTACAAAAAGCAATCAATGACCATCTATGGAGCGAGGAACTC
CAGGCCTACTACCACTCTGAAGCATACCAAGACTTCTTTTCGCAGGATGC
CAATGCCCTGGCCATCCTGAGCGATACTACGCACCTTACTGGAAATCGTA
CTGCTGCATTGTTGTCCACCATGGCACAGCAGTTATATATTCCCAAAGGC
GCTCTTGCCTTCTCCAACGCCAACATTGCCAGTGGCTTCGCCCAGCAGAT
CAGCCCCTATACCTCCGGCTACCACCTTAAGGCAGCCTTCCACGCGAACG
ATGCCGTTAATGCCAAAAGACTTCTCCACAGCATCTGGGGCCCGATGAGT
GACCCAAGACATGCCAACTACACTGGCTGTATGTGGGAGGTCATGAGTCC
TGATGGTACTCCCGGGCTCGGGTCCCTAACCTCGCTGTGTCATGCCTGGA
GCGCAGGGCCCACCGCTGATCTGAGCCATTATGTTCTCATTATCAGCCCG
TCACCCCTGGCTTTAAGGAGTGGAAAGTCGCACCTCAGACTTTGGGTCTG
GCCTGGGCACGGGGAGAATATCCTACCCCCTCACGGCAACATTATGGTTG
ATTGGTCTTTTAACTGCAGCGGGCATTTCAATATTGCCGTCAGCACCCCC
GTTGGCACTAGATGTACTGTTGCTCTTCCTAGCTCTTTGAACAGAACACT
TGAGGTGCAAGATGGAAAAGTCTTTCGCTATAAACAACATACCTGA
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Coding sequence (CDS) from alignment at ch3:4069708..4071103+

>KJC3_004150-T1 ID=KJC3_004150-T1|Name=KJC3_004150-T1|organism=Aspergillus niger KJC3|type=CDS|length=2592bp|location=Sequence derived from alignment at ch3:4069708..4071103+ (Aspergillus niger KJC3)
ATGAACCTCGCTCATACTTTGATCCGCCTTGTGCTCAATCCCTCCTCCGA
CGGGGTGACCCCCGCCATAATAATCCTAGACTATGGACGAGATGTCGAAA
GATATGCCATCTTCCAGATTTCACATATGTCCGGAGACACCCAGACTTCT
CGGCTCTTACCAGCTGACGCCGGGCTTCTTTATCCCGAATGCAAGATTAA
GCAGCCCCCTCGAACCAAAGATGTTCAGGCAAACACGACCGGTCTAATTG
GATACTCGTTCAATCTGCTGAGTGCAATGGCCAAGCTTTACGAGCAGACA
GGAGATGAAGTGTTTCTGCATCGTTGGGCTCCGAAAGCAGTGCGCATGCT
TGATTGGGCGTACTCTCAAACCCTACCAAATCACTTGCTCAACATCACCG
ATCCCGGCCTTGGTGGGGGATGGGACTACTCTGATCCTACCTCGTCCGGG
ATTGTCACCCAATTCAACATCTTGTACGCCTACTCGCTGAAGAAATGGAT
TTCGTATCTATCGCAGGCAAATATTAATGCCACTATGTATCAGAGACGGC
TGAACAACCTACAAAAAGCAATCAATGACCATCTATGGAGCGAGGAACTC
CAGGCCTACTACCACTCTGAAGCATACCAAGACTTCTTTTCGCAGGATGC
CAATGCCCTGGCCATCCTGAGCGATACTACGCACCTTACTGGAAATCGTA
CTGCTGCATTGTTGTCCACCATGGCACAGCAGTTATATATTCCCAAAGGC
GCTCTTGCCTTCTCCAACGCCAACATTGCCAGTGGCTTCGCCCAGCAGAT
CAGCCCCTATACCTCCGGCTACCACCTTAAGGCAGCCTTCCACGCGAACG
ATGCCGTTAATGCCAAAAGACTTCTCCACAGCATCTGGGGCCCGATGAGT
GACCCAAGACATGCCAACTACACTGGCTGTATGTGGGAGGTCATGAGTCC
TGATGGTACTCCCGGGCTCGGGTCCCTAACCTCGCTGTGTCATGCCTGGA
GCGCAGGGCCCACCGCTGATCTGAGCCATTATGTTCTCATTATCAGCCCG
TCACCCCTGGCTTTAAGGAGTGGAAAGTCGCACCTCAGACTTTGGGTCTG
GCCTGGGCACGGGGAGAATATCCTACCCCCTCACGGCAACATTATGGTTG
ATTGGTCTTTTAACTGCAGCGGGCATTTCAATATTGCCGTCAGCACCCCC
GTTGGCACTAGATGTACTGTTGCTCTTCCTAGCTCTTTGAACAGAACACT
TGAGGTGCAAGATGGAAAAGTCTTTCGCTATAAACAACATACCTGAATGA
ACCTCGCTCATACTTTGATCCGCCTTGTGCTCAATCCCTCCTCCGACGGG
GTGACCCCCGCCATAATAATCCTAGACTATGGACGAGATGTCGAAAGATA
TGCCATCTTCCAGATTTCACATATGTCCGGAGACACCCAGACTTCTCGGC
TCTTACCAGCTGACGCCGGGCTTCTTTATCCCGAATGCAAGATTAAGCAG
CCCCCTCGAACCAAAGATGTTCAGGCAAACACGACCGGTCTAATTGGATA
CTCGTTCAATCTGCTGAGTGCAATGGCCAAGCTTTACGAGCAGACAGGAG
ATGAAGTGTTTCTGCATCGTTGGGCTCCGAAAGCAGTGCGCATGCTTGAT
TGGGCGTACTCTCAAACCCTACCAAATCACTTGCTCAACATCACCGATCC
CGGCCTTGGTGGGGGATGGGACTACTCTGATCCTACCTCGTCCGGGATTG
TCACCCAATTCAACATCTTGTACGCCTACTCGCTGAAGAAATGGATTTCG
TATCTATCGCAGGCAAATATTAATGCCACTATGTATCAGAGACGGCTGAA
CAACCTACAAAAAGCAATCAATGACCATCTATGGAGCGAGGAACTCCAGG
CCTACTACCACTCTGAAGCATACCAAGACTTCTTTTCGCAGGATGCCAAT
GCCCTGGCCATCCTGAGCGATACTACGCACCTTACTGGAAATCGTACTGC
TGCATTGTTGTCCACCATGGCACAGCAGTTATATATTCCCAAAGGCGCTC
TTGCCTTCTCCAACGCCAACATTGCCAGTGGCTTCGCCCAGCAGATCAGC
CCCTATACCTCCGGCTACCACCTTAAGGCAGCCTTCCACGCGAACGATGC
CGTTAATGCCAAAAGACTTCTCCACAGCATCTGGGGCCCGATGAGTGACC
CAAGACATGCCAACTACACTGGCTGTATGTGGGAGGTCATGAGTCCTGAT
GGTACTCCCGGGCTCGGGTCCCTAACCTCGCTGTGTCATGCCTGGAGCGC
AGGGCCCACCGCTGATCTGAGCCATTATGTTCTCATTATCAGCCCGTCAC
CCCTGGCTTTAAGGAGTGGAAAGTCGCACCTCAGACTTTGGGTCTGGCCT
GGGCACGGGGAGAATATCCTACCCCCTCACGGCAACATTATGGTTGATTG
GTCTTTTAACTGCAGCGGGCATTTCAATATTGCCGTCAGCACCCCCGTTG
GCACTAGATGTACTGTTGCTCTTCCTAGCTCTTTGAACAGAACACTTGAG
GTGCAAGATGGAAAAGTCTTTCGCTATAAACAACATACCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004150KJC3_004150Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004150-T1.exon1KJC3_004150-T1.exon1Aspergillus niger KJC3exon
KJC3_004150-T1.exon2KJC3_004150-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004150-T1.cdsKJC3_004150-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004150-T1KJC3_004150-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:GH78
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR012341
DBxrefInterPro:IPR035398
DBxrefPFAM:PF17390
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4069708..4071103 +
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