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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4072284..4074193- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004151-T1 ID=KJC3_004151-T1|Name=KJC3_004151-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1910bp|location=Sequence derived from alignment at ch3:4072284..4074193- (Aspergillus niger KJC3)
CTGGCCGGGCCTCATCTGATTCACTTTAGTACTTCTCTCACAGTATTCCA
AGCATGCAGTCCTACCTGCAGTTTCGAAGAATCCACCAAGCTGTCCAGCG
CCAGTATAATGCACCTTTAAGGGAAGAAGAGGGTAATTGGAATGCGGGTG
ATACACCTCAGGACGACTCCTCATGTTGTCCTGATCTCCCCGAAAAACAC
CAAGCCCCAGCCCAAGATTCGCAGGTTGTCGTGGTCAGCTGGGATGACTA
TGACATACACCTGAGTCCACGACAGTATAGCCCGCAACGTAAAGCCTGGA
TGACGGTCCTGGTCGCCTTGATTGGGCTTTCGTGTACAGCAGCATCGGCC
ATTGATTCCGCCGGGGTGCCGCAGATTAGTGAACACTGGGGCGTCTCGAA
GGTGGTTGGCTCTTTGGTAACTGGTATGCTTCCGGCTAATTGTTATCACT
ATTCTGAGATGGTCACTGATACAAGAACCCAGCCCTCTTCATGGTCGGCT
TTGGGATCGGCTCTTTCATATCAGGGCCGTTTTCCGAGACATTTGGCCGG
AACATGGTGTATATGGTGACGATGCTCATCTTTCTGATCTGGATCATGGC
AGCTGGTCTTGCACCTAATATTCAGAGTCATCTCATTTTCCGCTTTCTGG
CTGGGTTGTTCGCAGCGACTCCTCTTACATGCGTGGGAGGTACTGTTGCC
GACCTGTGGGACCCGCTGCAGAAGACATACGGCTTCATCATCTACACCAT
TCCCGCCTTTAACGGCCCGATGATCGGACAGGTTATAGGAAGCTACATTC
CCACCACCATCGGATGGCGGTGGCTGGAATGGATCATGCTGATCTTTGGC
GGGGTGATGTTTATCATCATGATCTTGTTCCAGCAAGAGACGCACCAGGA
TACACTCTTGACCTGGAAAGCCGCCGCGCTGCGGAAATATTCTGGGCAGC
AGCATTGGCGAGGACCGGCCGAAGTGCGCGAAATCTCTCTTGGACAACGA
CTGAAGATTGCGACCTCCCGACCCTTCGCCTGGATCATCACTGAACCGAT
CATTGTCCTGACCTCCCTCTATCTTATCGCGATCTACGTTATTCTCTTCT
TGTTTCTTGAGGGTTACCGATTTATTTTTGAGGATGTCTATCACTTTTCA
CAAGGGATGAACAACGTGACTTGGATTGCTATGTTTATCGGTTCGACTCT
CATCATAGTCCAGGTCCCTTTCGTCTGGCGCATTGCGAAGAGACAACAAG
AAACCCTGGGCCGCATTCGCCCCGAGACACGATTGTGGTACGCTATGCTT
GGAGGCGCCCCAGCCATCCCAATCAGTCTCTTCTGGATGGGCTGGACGAG
CTACGTAAGTTATCTACTACCGATCCATCTTGGTTCCCTCAACCATCATA
ATAACCACCTCTCCAATTTTTAGCCCCATATTAGTGTCTGGTCTCCCATT
ATCGCGTCTGCGGTCTTTGGGTTCGGCATCACCACCGTCTTCGTCAGTGC
GCATCTATATGTGATCGATGCGTACGAGGCGGGCGCGGCGTCCGCCTTTG
CCATGCTTGTCATGCCCCGGTACCTGGCGTCGGGCGGCATTACCGTTGCC
GGAAGCCCAATCTACTCCAGTATCGGCGTCCACTATACCCTGACCATCTT
GGGGGCCATCAGCGCTGCCATGGCTTTCATTCCGTACGTTTTCTATTTCT
TTGGCCACCACATCCGGCGTGTCAGTCCCCATGCTGTGGTTCATGAATAA
TTTAGAGGTCGAATGGGATGAGGCGGTTCTGAACATGTTCCATCCCCACC
ACAATGGCAAATCTTCGCGACGTTGGACAGCCATGACTTTGCAAATCATT
GCAATGGTCTGAGCTGATGCCTATCAGTTCCCGACCGCCATGTTTGTCTG
GAGTGGGGGA back to topCoding sequence (CDS) from alignment at ch3:4072284..4074193- >KJC3_004151-T1 ID=KJC3_004151-T1|Name=KJC3_004151-T1|organism=Aspergillus niger KJC3|type=CDS|length=4707bp|location=Sequence derived from alignment at ch3:4072284..4074193- (Aspergillus niger KJC3)
CCCCATATTAGTGTCTGGTCTCCCATTATCGCGTCTGCGGTCTTTGGGTT
CGGCATCACCACCGTCTTCGTCAGTGCGCATCTATATGTGATCGATGCGT
ACGAGGCGGGCGCGGCGTCCGCCTTTGCCATGCTTGTCATGCCCCGGTAC
CTGGCGTCGGGCGGCATTACCGTTGCCGGAAGCCCAATCTACTCCAGTAT
CGGCGTCCACTATACCCTGACCATCTTGGGGGCCATCAGCGCTGCCATGG
CTTTCATTCCGTACGTTTTCTATTTCTTTGGCCACCACATCCGGCGTGTC
AGTCCCCATGCTGTGGTTCATGAATAACCCTCTTCATGGTCGGCTTTGGG
ATCGGCTCTTTCATATCAGGGCCGTTTTCCGAGACATTTGGCCGGAACAT
GGTGTATATGGTGACGATGCTCATCTTTCTGATCTGGATCATGGCAGCTG
GTCTTGCACCTAATATTCAGAGTCATCTCATTTTCCGCTTTCTGGCTGGG
TTGTTCGCAGCGACTCCTCTTACATGCGTGGGAGGTACTGTTGCCGACCT
GTGGGACCCGCTGCAGAAGACATACGGCTTCATCATCTACACCATTCCCG
CCTTTAACGGCCCGATGATCGGACAGGTTATAGGAAGCTACATTCCCACC
ACCATCGGATGGCGGTGGCTGGAATGGATCATGCTGATCTTTGGCGGGGT
GATGTTTATCATCATGATCTTGTTCCAGCAAGAGACGCACCAGGATACAC
TCTTGACCTGGAAAGCCGCCGCGCTGCGGAAATATTCTGGGCAGCAGCAT
TGGCGAGGACCGGCCGAAGTGCGCGAAATCTCTCTTGGACAACGACTGAA
GATTGCGACCTCCCGACCCTTCGCCTGGATCATCACTGAACCGATCATTG
TCCTGACCTCCCTCTATCTTATCGCGATCTACGTTATTCTCTTCTTGTTT
CTTGAGGGTTACCGATTTATTTTTGAGGATGTCTATCACTTTTCACAAGG
GATGAACAACGTGACTTGGATTGCTATGTTTATCGGTTCGACTCTCATCA
TAGTCCAGGTCCCTTTCGTCTGGCGCATTGCGAAGAGACAACAAGAAACC
CTGGGCCGCATTCGCCCCGAGACACGATTGTGGTACGCTATGCTTGGAGG
CGCCCCAGCCATCCCAATCAGTCTCTTCTGGATGGGCTGGACGAGCTACA
TGCAGTCCTACCTGCAGTTTCGAAGAATCCACCAAGCTGTCCAGCGCCAG
TATAATGCACCTTTAAGGGAAGAAGAGGGTAATTGGAATGCGGGTGATAC
ACCTCAGGACGACTCCTCATGTTGTCCTGATCTCCCCGAAAAACACCAAG
CCCCAGCCCAAGATTCGCAGGTTGTCGTGGTCAGCTGGGATGACTATGAC
ATACACCTGAGTCCACGACAGTATAGCCCGCAACGTAAAGCCTGGATGAC
GGTCCTGGTCGCCTTGATTGGGCTTTCGTGTACAGCAGCATCGGCCATTG
ATTCCGCCGGGGTGCCGCAGATTAGTGAACACTGGGGCGTCTCGAAGGTG
GTTGGCTCTTTGGTAACTGCCCCATATTAGTGTCTGGTCTCCCATTATCG
CGTCTGCGGTCTTTGGGTTCGGCATCACCACCGTCTTCGTCAGTGCGCAT
CTATATGTGATCGATGCGTACGAGGCGGGCGCGGCGTCCGCCTTTGCCAT
GCTTGTCATGCCCCGGTACCTGGCGTCGGGCGGCATTACCGTTGCCGGAA
GCCCAATCTACTCCAGTATCGGCGTCCACTATACCCTGACCATCTTGGGG
GCCATCAGCGCTGCCATGGCTTTCATTCCGTACGTTTTCTATTTCTTTGG
CCACCACATCCGGCGTGTCAGTCCCCATGCTGTGGTTCATGAATAACCCT
CTTCATGGTCGGCTTTGGGATCGGCTCTTTCATATCAGGGCCGTTTTCCG
AGACATTTGGCCGGAACATGGTGTATATGGTGACGATGCTCATCTTTCTG
ATCTGGATCATGGCAGCTGGTCTTGCACCTAATATTCAGAGTCATCTCAT
TTTCCGCTTTCTGGCTGGGTTGTTCGCAGCGACTCCTCTTACATGCGTGG
GAGGTACTGTTGCCGACCTGTGGGACCCGCTGCAGAAGACATACGGCTTC
ATCATCTACACCATTCCCGCCTTTAACGGCCCGATGATCGGACAGGTTAT
AGGAAGCTACATTCCCACCACCATCGGATGGCGGTGGCTGGAATGGATCA
TGCTGATCTTTGGCGGGGTGATGTTTATCATCATGATCTTGTTCCAGCAA
GAGACGCACCAGGATACACTCTTGACCTGGAAAGCCGCCGCGCTGCGGAA
ATATTCTGGGCAGCAGCATTGGCGAGGACCGGCCGAAGTGCGCGAAATCT
CTCTTGGACAACGACTGAAGATTGCGACCTCCCGACCCTTCGCCTGGATC
ATCACTGAACCGATCATTGTCCTGACCTCCCTCTATCTTATCGCGATCTA
CGTTATTCTCTTCTTGTTTCTTGAGGGTTACCGATTTATTTTTGAGGATG
TCTATCACTTTTCACAAGGGATGAACAACGTGACTTGGATTGCTATGTTT
ATCGGTTCGACTCTCATCATAGTCCAGGTCCCTTTCGTCTGGCGCATTGC
GAAGAGACAACAAGAAACCCTGGGCCGCATTCGCCCCGAGACACGATTGT
GGTACGCTATGCTTGGAGGCGCCCCAGCCATCCCAATCAGTCTCTTCTGG
ATGGGCTGGACGAGCTACATGCAGTCCTACCTGCAGTTTCGAAGAATCCA
CCAAGCTGTCCAGCGCCAGTATAATGCACCTTTAAGGGAAGAAGAGGGTA
ATTGGAATGCGGGTGATACACCTCAGGACGACTCCTCATGTTGTCCTGAT
CTCCCCGAAAAACACCAAGCCCCAGCCCAAGATTCGCAGGTTGTCGTGGT
CAGCTGGGATGACTATGACATACACCTGAGTCCACGACAGTATAGCCCGC
AACGTAAAGCCTGGATGACGGTCCTGGTCGCCTTGATTGGGCTTTCGTGT
ACAGCAGCATCGGCCATTGATTCCGCCGGGGTGCCGCAGATTAGTGAACA
CTGGGGCGTCTCGAAGGTGGTTGGCTCTTTGGTAACTGCCCCATATTAGT
GTCTGGTCTCCCATTATCGCGTCTGCGGTCTTTGGGTTCGGCATCACCAC
CGTCTTCGTCAGTGCGCATCTATATGTGATCGATGCGTACGAGGCGGGCG
CGGCGTCCGCCTTTGCCATGCTTGTCATGCCCCGGTACCTGGCGTCGGGC
GGCATTACCGTTGCCGGAAGCCCAATCTACTCCAGTATCGGCGTCCACTA
TACCCTGACCATCTTGGGGGCCATCAGCGCTGCCATGGCTTTCATTCCGT
ACGTTTTCTATTTCTTTGGCCACCACATCCGGCGTGTCAGTCCCCATGCT
GTGGTTCATGAATAACCCTCTTCATGGTCGGCTTTGGGATCGGCTCTTTC
ATATCAGGGCCGTTTTCCGAGACATTTGGCCGGAACATGGTGTATATGGT
GACGATGCTCATCTTTCTGATCTGGATCATGGCAGCTGGTCTTGCACCTA
ATATTCAGAGTCATCTCATTTTCCGCTTTCTGGCTGGGTTGTTCGCAGCG
ACTCCTCTTACATGCGTGGGAGGTACTGTTGCCGACCTGTGGGACCCGCT
GCAGAAGACATACGGCTTCATCATCTACACCATTCCCGCCTTTAACGGCC
CGATGATCGGACAGGTTATAGGAAGCTACATTCCCACCACCATCGGATGG
CGGTGGCTGGAATGGATCATGCTGATCTTTGGCGGGGTGATGTTTATCAT
CATGATCTTGTTCCAGCAAGAGACGCACCAGGATACACTCTTGACCTGGA
AAGCCGCCGCGCTGCGGAAATATTCTGGGCAGCAGCATTGGCGAGGACCG
GCCGAAGTGCGCGAAATCTCTCTTGGACAACGACTGAAGATTGCGACCTC
CCGACCCTTCGCCTGGATCATCACTGAACCGATCATTGTCCTGACCTCCC
TCTATCTTATCGCGATCTACGTTATTCTCTTCTTGTTTCTTGAGGGTTAC
CGATTTATTTTTGAGGATGTCTATCACTTTTCACAAGGGATGAACAACGT
GACTTGGATTGCTATGTTTATCGGTTCGACTCTCATCATAGTCCAGGTCC
CTTTCGTCTGGCGCATTGCGAAGAGACAACAAGAAACCCTGGGCCGCATT
CGCCCCGAGACACGATTGTGGTACGCTATGCTTGGAGGCGCCCCAGCCAT
CCCAATCAGTCTCTTCTGGATGGGCTGGACGAGCTACATGCAGTCCTACC
TGCAGTTTCGAAGAATCCACCAAGCTGTCCAGCGCCAGTATAATGCACCT
TTAAGGGAAGAAGAGGGTAATTGGAATGCGGGTGATACACCTCAGGACGA
CTCCTCATGTTGTCCTGATCTCCCCGAAAAACACCAAGCCCCAGCCCAAG
ATTCGCAGGTTGTCGTGGTCAGCTGGGATGACTATGACATACACCTGAGT
CCACGACAGTATAGCCCGCAACGTAAAGCCTGGATGACGGTCCTGGTCGC
CTTGATTGGGCTTTCGTGTACAGCAGCATCGGCCATTGATTCCGCCGGGG
TGCCGCAGATTAGTGAACACTGGGGCGTCTCGAAGGTGGTTGGCTCTTTG
GTAACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004151-T1.utr3p1 | KJC3_004151-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004151-T1.utr5p1 | KJC3_004151-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4072284..4074193 - |
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