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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4086205..4087984- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004156-T1 ID=KJC3_004156-T1|Name=KJC3_004156-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1780bp|location=Sequence derived from alignment at ch3:4086205..4087984- (Aspergillus niger KJC3)
CAGCAATGGAGGCATATCTCCAGTACCAACGGATTCGGAAATCCGTGCAA
CAGCACTTGGCAGAGCTGAAAGATAATTGCAGCTGTCCGAGCTACCCTAT
CGGCGCTCATCATGGCCCCAAGTAAGTCTTGGAGAAAATGTAATTAGGCT
TGCAACTGTCTAACAGAACACCATGTAGCTGCAAACTGAGCGGCTATTGC
AGTACCCAGGAGAAAAGACCTACCGAATCGATGGCCCCTGACGCTGCGAT
TCTTGTGGACTGGGACGGACAAGATGATCCTTTGAACCCCGCAAATCAGA
GTACATCGCGGAAGCTCTTCATGACCTTCTTGGTCTCATTGATTGCAGTG
GCCGTAACTGCTGCATCGGCGATCGATGCTTGTGGAGTCAAGGAGTATAG
CCAATACTTCCACGTATCGGAAGTTGTTGGGTCTCTAGCGACAGGTATGG
CGTCTTCTCTCTGGAATCTATTATAGCAAAGAGCTGAACTCCTCATGTCT
CTGAATAGGTCTGTTCCTTATCGGATTTGCATTTGGTTCCCTTCTCTCGG
GCCCTTTCTCAGAAACCTTCGGGCGTAATGCCATATATTCAACAACAATG
CTCCTCTTCTTAGTCTTCGTCATGGCATCAGGACTAGCCCCAAACCTCCA
CAGTCACCTTATCTTCCGTTTCTTTGCCGGCCTCTTCGCTTCCACTCCGC
TAACCTGCGCCGGTGGTACGGTTGCCGACTTATGGAACCCTCTGGAAAAG
ACCTATGCTTTTCCAGCTTACGCTATACCTGCATTTATCGGGCCCATGAT
CGGCCAAATAATGGGAAGCTACATTCCAGTCACGCTAGGCTGGCGCTGGC
TTGAGTGGATAATGCTTATCATGGGTGGGGTAGTTATGGCTCTGGTCCTG
CTATTTCAACCCGAGACATATGGCAACCTAGTTCTCTACTGGAAGGCTTC
CATCCTTCGAAAAGAGACTGGTGATGAGAGATATAGGGCTCCCATGGAGA
TCAGTCAGAAGGGCCTGGGCCAGCGCTTGAAGATCTCTGTGTATCGGCCA
TTTGCGATGTTCTATTCGGAGCTAATCATCATCTTGATGTCGCTATATCT
GACCATTATTTATATCGTCCTCTTCACTTTTCTCGAGGGGTATGCCTACA
TCTTTGGCGACATATATGGCCTCTCCGAAGGACTGACCAACCTTTGCTGG
GCTGGGATGCTTGTTGGGACTTTGCTGGTTAGCGGCGTGGTGCCGGTAGT
TTACAGCTGGACTGCGAAGGCCTATGCTAGAGATAAGTTCACTATTGCTC
CTGAGATGAGACTCTGGTATACCATGCTTGGTGGTGCAGTGGCAGTGCCG
ATCAGTCTGTTCTGGATGGGTTGGACAAGCAATGTAAGTCTATACGGATA
CCCTCACAGGTTTTGCAGGCGCTAAGATATATTTCCTCTTTCAACAGCCA
AAAATCTCAATCTGGTCCCCTCTCATCGCGTCAGTCCTTTTCGGCTACGG
TATAACCACCATCTTCATTGTTGCATACATGTATCTCATTGATTCTTACG
ATACATATTCGGCCTCTGCATTAGGATTTCTCGTGTTCACGCGATATGTG
GTGGCGGGAGGTGTAACTGTTGCGGGTGGCCCCATTTACGAGGCTCTCGG
CGTGCAGTATACCCTGACTATTCTGGGGTCCATCAGTGCAGTTATGGCGT
TGGTGCCTTATCTGCTTTATTTCTATGGGCCAATGATCCGCAAGAAGAGT
AAATATGCGGTGAATATTGATACCGAGTGA back to topCoding sequence (CDS) from alignment at ch3:4086205..4087984- >KJC3_004156-T1 ID=KJC3_004156-T1|Name=KJC3_004156-T1|organism=Aspergillus niger KJC3|type=CDS|length=6360bp|location=Sequence derived from alignment at ch3:4086205..4087984- (Aspergillus niger KJC3)
CCAAAAATCTCAATCTGGTCCCCTCTCATCGCGTCAGTCCTTTTCGGCTA
CGGTATAACCACCATCTTCATTGTTGCATACATGTATCTCATTGATTCTT
ACGATACATATTCGGCCTCTGCATTAGGATTTCTCGTGTTCACGCGATAT
GTGGTGGCGGGAGGTGTAACTGTTGCGGGTGGCCCCATTTACGAGGCTCT
CGGCGTGCAGTATACCCTGACTATTCTGGGGTCCATCAGTGCAGTTATGG
CGTTGGTGCCTTATCTGCTTTATTTCTATGGGCCAATGATCCGCAAGAAG
AGTAAATATGCGGTGAATATTGATACCGAGTGAGTCTGTTCCTTATCGGA
TTTGCATTTGGTTCCCTTCTCTCGGGCCCTTTCTCAGAAACCTTCGGGCG
TAATGCCATATATTCAACAACAATGCTCCTCTTCTTAGTCTTCGTCATGG
CATCAGGACTAGCCCCAAACCTCCACAGTCACCTTATCTTCCGTTTCTTT
GCCGGCCTCTTCGCTTCCACTCCGCTAACCTGCGCCGGTGGTACGGTTGC
CGACTTATGGAACCCTCTGGAAAAGACCTATGCTTTTCCAGCTTACGCTA
TACCTGCATTTATCGGGCCCATGATCGGCCAAATAATGGGAAGCTACATT
CCAGTCACGCTAGGCTGGCGCTGGCTTGAGTGGATAATGCTTATCATGGG
TGGGGTAGTTATGGCTCTGGTCCTGCTATTTCAACCCGAGACATATGGCA
ACCTAGTTCTCTACTGGAAGGCTTCCATCCTTCGAAAAGAGACTGGTGAT
GAGAGATATAGGGCTCCCATGGAGATCAGTCAGAAGGGCCTGGGCCAGCG
CTTGAAGATCTCTGTGTATCGGCCATTTGCGATGTTCTATTCGGAGCTAA
TCATCATCTTGATGTCGCTATATCTGACCATTATTTATATCGTCCTCTTC
ACTTTTCTCGAGGGGTATGCCTACATCTTTGGCGACATATATGGCCTCTC
CGAAGGACTGACCAACCTTTGCTGGGCTGGGATGCTTGTTGGGACTTTGC
TGGTTAGCGGCGTGGTGCCGGTAGTTTACAGCTGGACTGCGAAGGCCTAT
GCTAGAGATAAGTTCACTATTGCTCCTGAGATGAGACTCTGGTATACCAT
GCTTGGTGGTGCAGTGGCAGTGCCGATCAGTCTGTTCTGGATGGGTTGGA
CAAGCAATCTGCAAACTGAGCGGCTATTGCAGTACCCAGGAGAAAAGACC
TACCGAATCGATGGCCCCTGACGCTGCGATTCTTGTGGACTGGGACGGAC
AAGATGATCCTTTGAACCCCGCAAATCAGAGTACATCGCGGAAGCTCTTC
ATGACCTTCTTGGTCTCATTGATTGCAGTGGCCGTAACTGCTGCATCGGC
GATCGATGCTTGTGGAGTCAAGGAGTATAGCCAATACTTCCACGTATCGG
AAGTTGTTGGGTCTCTAGCGACAGATGGAGGCATATCTCCAGTACCAACG
GATTCGGAAATCCGTGCAACAGCACTTGGCAGAGCTGAAAGATAATTGCA
GCTGTCCGAGCTACCCTATCGGCGCTCATCATGGCCCCAACCAAAAATCT
CAATCTGGTCCCCTCTCATCGCGTCAGTCCTTTTCGGCTACGGTATAACC
ACCATCTTCATTGTTGCATACATGTATCTCATTGATTCTTACGATACATA
TTCGGCCTCTGCATTAGGATTTCTCGTGTTCACGCGATATGTGGTGGCGG
GAGGTGTAACTGTTGCGGGTGGCCCCATTTACGAGGCTCTCGGCGTGCAG
TATACCCTGACTATTCTGGGGTCCATCAGTGCAGTTATGGCGTTGGTGCC
TTATCTGCTTTATTTCTATGGGCCAATGATCCGCAAGAAGAGTAAATATG
CGGTGAATATTGATACCGAGTGAGTCTGTTCCTTATCGGATTTGCATTTG
GTTCCCTTCTCTCGGGCCCTTTCTCAGAAACCTTCGGGCGTAATGCCATA
TATTCAACAACAATGCTCCTCTTCTTAGTCTTCGTCATGGCATCAGGACT
AGCCCCAAACCTCCACAGTCACCTTATCTTCCGTTTCTTTGCCGGCCTCT
TCGCTTCCACTCCGCTAACCTGCGCCGGTGGTACGGTTGCCGACTTATGG
AACCCTCTGGAAAAGACCTATGCTTTTCCAGCTTACGCTATACCTGCATT
TATCGGGCCCATGATCGGCCAAATAATGGGAAGCTACATTCCAGTCACGC
TAGGCTGGCGCTGGCTTGAGTGGATAATGCTTATCATGGGTGGGGTAGTT
ATGGCTCTGGTCCTGCTATTTCAACCCGAGACATATGGCAACCTAGTTCT
CTACTGGAAGGCTTCCATCCTTCGAAAAGAGACTGGTGATGAGAGATATA
GGGCTCCCATGGAGATCAGTCAGAAGGGCCTGGGCCAGCGCTTGAAGATC
TCTGTGTATCGGCCATTTGCGATGTTCTATTCGGAGCTAATCATCATCTT
GATGTCGCTATATCTGACCATTATTTATATCGTCCTCTTCACTTTTCTCG
AGGGGTATGCCTACATCTTTGGCGACATATATGGCCTCTCCGAAGGACTG
ACCAACCTTTGCTGGGCTGGGATGCTTGTTGGGACTTTGCTGGTTAGCGG
CGTGGTGCCGGTAGTTTACAGCTGGACTGCGAAGGCCTATGCTAGAGATA
AGTTCACTATTGCTCCTGAGATGAGACTCTGGTATACCATGCTTGGTGGT
GCAGTGGCAGTGCCGATCAGTCTGTTCTGGATGGGTTGGACAAGCAATCT
GCAAACTGAGCGGCTATTGCAGTACCCAGGAGAAAAGACCTACCGAATCG
ATGGCCCCTGACGCTGCGATTCTTGTGGACTGGGACGGACAAGATGATCC
TTTGAACCCCGCAAATCAGAGTACATCGCGGAAGCTCTTCATGACCTTCT
TGGTCTCATTGATTGCAGTGGCCGTAACTGCTGCATCGGCGATCGATGCT
TGTGGAGTCAAGGAGTATAGCCAATACTTCCACGTATCGGAAGTTGTTGG
GTCTCTAGCGACAGATGGAGGCATATCTCCAGTACCAACGGATTCGGAAA
TCCGTGCAACAGCACTTGGCAGAGCTGAAAGATAATTGCAGCTGTCCGAG
CTACCCTATCGGCGCTCATCATGGCCCCAACCAAAAATCTCAATCTGGTC
CCCTCTCATCGCGTCAGTCCTTTTCGGCTACGGTATAACCACCATCTTCA
TTGTTGCATACATGTATCTCATTGATTCTTACGATACATATTCGGCCTCT
GCATTAGGATTTCTCGTGTTCACGCGATATGTGGTGGCGGGAGGTGTAAC
TGTTGCGGGTGGCCCCATTTACGAGGCTCTCGGCGTGCAGTATACCCTGA
CTATTCTGGGGTCCATCAGTGCAGTTATGGCGTTGGTGCCTTATCTGCTT
TATTTCTATGGGCCAATGATCCGCAAGAAGAGTAAATATGCGGTGAATAT
TGATACCGAGTGAGTCTGTTCCTTATCGGATTTGCATTTGGTTCCCTTCT
CTCGGGCCCTTTCTCAGAAACCTTCGGGCGTAATGCCATATATTCAACAA
CAATGCTCCTCTTCTTAGTCTTCGTCATGGCATCAGGACTAGCCCCAAAC
CTCCACAGTCACCTTATCTTCCGTTTCTTTGCCGGCCTCTTCGCTTCCAC
TCCGCTAACCTGCGCCGGTGGTACGGTTGCCGACTTATGGAACCCTCTGG
AAAAGACCTATGCTTTTCCAGCTTACGCTATACCTGCATTTATCGGGCCC
ATGATCGGCCAAATAATGGGAAGCTACATTCCAGTCACGCTAGGCTGGCG
CTGGCTTGAGTGGATAATGCTTATCATGGGTGGGGTAGTTATGGCTCTGG
TCCTGCTATTTCAACCCGAGACATATGGCAACCTAGTTCTCTACTGGAAG
GCTTCCATCCTTCGAAAAGAGACTGGTGATGAGAGATATAGGGCTCCCAT
GGAGATCAGTCAGAAGGGCCTGGGCCAGCGCTTGAAGATCTCTGTGTATC
GGCCATTTGCGATGTTCTATTCGGAGCTAATCATCATCTTGATGTCGCTA
TATCTGACCATTATTTATATCGTCCTCTTCACTTTTCTCGAGGGGTATGC
CTACATCTTTGGCGACATATATGGCCTCTCCGAAGGACTGACCAACCTTT
GCTGGGCTGGGATGCTTGTTGGGACTTTGCTGGTTAGCGGCGTGGTGCCG
GTAGTTTACAGCTGGACTGCGAAGGCCTATGCTAGAGATAAGTTCACTAT
TGCTCCTGAGATGAGACTCTGGTATACCATGCTTGGTGGTGCAGTGGCAG
TGCCGATCAGTCTGTTCTGGATGGGTTGGACAAGCAATCTGCAAACTGAG
CGGCTATTGCAGTACCCAGGAGAAAAGACCTACCGAATCGATGGCCCCTG
ACGCTGCGATTCTTGTGGACTGGGACGGACAAGATGATCCTTTGAACCCC
GCAAATCAGAGTACATCGCGGAAGCTCTTCATGACCTTCTTGGTCTCATT
GATTGCAGTGGCCGTAACTGCTGCATCGGCGATCGATGCTTGTGGAGTCA
AGGAGTATAGCCAATACTTCCACGTATCGGAAGTTGTTGGGTCTCTAGCG
ACAGATGGAGGCATATCTCCAGTACCAACGGATTCGGAAATCCGTGCAAC
AGCACTTGGCAGAGCTGAAAGATAATTGCAGCTGTCCGAGCTACCCTATC
GGCGCTCATCATGGCCCCAACCAAAAATCTCAATCTGGTCCCCTCTCATC
GCGTCAGTCCTTTTCGGCTACGGTATAACCACCATCTTCATTGTTGCATA
CATGTATCTCATTGATTCTTACGATACATATTCGGCCTCTGCATTAGGAT
TTCTCGTGTTCACGCGATATGTGGTGGCGGGAGGTGTAACTGTTGCGGGT
GGCCCCATTTACGAGGCTCTCGGCGTGCAGTATACCCTGACTATTCTGGG
GTCCATCAGTGCAGTTATGGCGTTGGTGCCTTATCTGCTTTATTTCTATG
GGCCAATGATCCGCAAGAAGAGTAAATATGCGGTGAATATTGATACCGAG
TGAGTCTGTTCCTTATCGGATTTGCATTTGGTTCCCTTCTCTCGGGCCCT
TTCTCAGAAACCTTCGGGCGTAATGCCATATATTCAACAACAATGCTCCT
CTTCTTAGTCTTCGTCATGGCATCAGGACTAGCCCCAAACCTCCACAGTC
ACCTTATCTTCCGTTTCTTTGCCGGCCTCTTCGCTTCCACTCCGCTAACC
TGCGCCGGTGGTACGGTTGCCGACTTATGGAACCCTCTGGAAAAGACCTA
TGCTTTTCCAGCTTACGCTATACCTGCATTTATCGGGCCCATGATCGGCC
AAATAATGGGAAGCTACATTCCAGTCACGCTAGGCTGGCGCTGGCTTGAG
TGGATAATGCTTATCATGGGTGGGGTAGTTATGGCTCTGGTCCTGCTATT
TCAACCCGAGACATATGGCAACCTAGTTCTCTACTGGAAGGCTTCCATCC
TTCGAAAAGAGACTGGTGATGAGAGATATAGGGCTCCCATGGAGATCAGT
CAGAAGGGCCTGGGCCAGCGCTTGAAGATCTCTGTGTATCGGCCATTTGC
GATGTTCTATTCGGAGCTAATCATCATCTTGATGTCGCTATATCTGACCA
TTATTTATATCGTCCTCTTCACTTTTCTCGAGGGGTATGCCTACATCTTT
GGCGACATATATGGCCTCTCCGAAGGACTGACCAACCTTTGCTGGGCTGG
GATGCTTGTTGGGACTTTGCTGGTTAGCGGCGTGGTGCCGGTAGTTTACA
GCTGGACTGCGAAGGCCTATGCTAGAGATAAGTTCACTATTGCTCCTGAG
ATGAGACTCTGGTATACCATGCTTGGTGGTGCAGTGGCAGTGCCGATCAG
TCTGTTCTGGATGGGTTGGACAAGCAATCTGCAAACTGAGCGGCTATTGC
AGTACCCAGGAGAAAAGACCTACCGAATCGATGGCCCCTGACGCTGCGAT
TCTTGTGGACTGGGACGGACAAGATGATCCTTTGAACCCCGCAAATCAGA
GTACATCGCGGAAGCTCTTCATGACCTTCTTGGTCTCATTGATTGCAGTG
GCCGTAACTGCTGCATCGGCGATCGATGCTTGTGGAGTCAAGGAGTATAG
CCAATACTTCCACGTATCGGAAGTTGTTGGGTCTCTAGCGACAGATGGAG
GCATATCTCCAGTACCAACGGATTCGGAAATCCGTGCAACAGCACTTGGC
AGAGCTGAAAGATAATTGCAGCTGTCCGAGCTACCCTATCGGCGCTCATC
ATGGCCCCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004156-T1.utr5p1 | KJC3_004156-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4086205..4087984 - |
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