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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4095402..4096675+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004159-T1 ID=KJC3_004159-T1|Name=KJC3_004159-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1274bp|location=Sequence derived from alignment at ch3:4095402..4096675+ (Aspergillus niger KJC3)
ATCTGCCGCCATTCGTTTGATATCCCTTCTCTTGACCTAACCTTCCATAT
CACACAGATCAAACAGATTAATAGACTACGAACCATGGGCTCCATCTCCC
TCACCGACATGTCCAACCCCTCGTGCCTCCTCTACGGCGCCCACGACGCC
CGCTACGAAGACCGACCCATCCCCACCATCACTTCCCCAACAGATGTAAT
AATCCGCATTGCCTACACAGGCGTCTGCGGCAGCGACGTACCCCTCCCTC
TTTCCCCTATATCTCCCAATTCTACCAACCCACTCAACCCCCTAACCAAA
GAAACCAGGTCCACTTCTACCACCACGGCGGCATCCACCGCCCCATAACC
CCCTCCAACCCGATAACAATGGGCCATGAATCCACCGGCATCATCCACGC
CATCGGCCCGGCCGTAACCACCCTCTCCCCAGGCGACCCCGTAGCCCTCG
AACCCGGTTACGCATGCCACCGCTGTAATCTTTGCAAATCCGGACGGTAT
AATCTGTGCCGGGAGATGAAGTTCGCCGCGGTCCCTGGCATATGTCACGG
CACCCTCACGCGGTTCTTCAAGTTACCTGCTGATTACTGCTACCGGATTC
CGGAGGGGACATTAGGATTGGATGAGGCGACGCTGTTGGAGCCGTTGGGG
GTGGCGGTGCGGTCTGTGAGGGAGGTGGGGGTAAAGCCTGGGATGAGGGT
GGTGGTTTTTGGGGCGGGGACTGTCGGGGTGTTGTGTATGGCCGTGGCGA
GGGAGTTTGGGGCGAGCAGGGTTGTTGGGGTGGATTTGAGTGAGAGGAAG
TTGGAGTTTGCGGAAAGTGTGGTTGGGAAGAGGGTTTGGGGGGGTGGGTT
TGTTCCATCAGGAGATGCGGAGGATGGAAGGAGGTTGGTGGAGGGATTTT
GTGGGAGTGATGATGATGAGGCAGGGTTCGATGTTGTTATTGAGGCTACG
GGGGCAGAGGCTTGTATTAACTTGGGCATAGAGGTGGTGAAGGTTGGAGG
GGCGTTTATGCAGACGGGGCTGGGGAGGAAGAATGTGAGTTTTCCCATTG
GAACGGTGGTTGCGAAGGAGGTTGTCGTTAAGGGGTGTTTTCGGTATGGG
CCGGGGGATTACAAGCTCGGGATGCAGATGGCTGTGGAGGGGAGGATTCC
GCTGAAGAGGTTTATTACCAAGGTGGTAGGTTTTGAGGATGCCGTTGAGG
CGTGGGAGACTACGGCTAGGGGGGAAGGGATTAAGACGTTGATCAGAGGG
GTGGATACGCCGGTGGAAGTGTAG back to topCoding sequence (CDS) from alignment at ch3:4095402..4096675+ >KJC3_004159-T1 ID=KJC3_004159-T1|Name=KJC3_004159-T1|organism=Aspergillus niger KJC3|type=CDS|length=2238bp|location=Sequence derived from alignment at ch3:4095402..4096675+ (Aspergillus niger KJC3)
ATGGGCTCCATCTCCCTCACCGACATGTCCAACCCCTCGTGCCTCCTCTA
CGGCGCCCACGACGCCCGCTACGAAGACCGACCCATCCCCACCATCACTT
CCCCAACAGATGTAATAATCCGCATTGCCTACACAGGCGTCTGCGGCAGC
GACGTCCACTTCTACCACCACGGCGGCATCCACCGCCCCATAACCCCCTC
CAACCCGATAACAATGGGCCATGAATCCACCGGCATCATCCACGCCATCG
GCCCGGCCGTAACCACCCTCTCCCCAGGCGACCCCGTAGCCCTCGAACCC
GGTTACGCATGCCACCGCTGTAATCTTTGCAAATCCGGACGGTATAATCT
GTGCCGGGAGATGAAGTTCGCCGCGGTCCCTGGCATATGTCACGGCACCC
TCACGCGGTTCTTCAAGTTACCTGCTGATTACTGCTACCGGATTCCGGAG
GGGACATTAGGATTGGATGAGGCGACGCTGTTGGAGCCGTTGGGGGTGGC
GGTGCGGTCTGTGAGGGAGGTGGGGGTAAAGCCTGGGATGAGGGTGGTGG
TTTTTGGGGCGGGGACTGTCGGGGTGTTGTGTATGGCCGTGGCGAGGGAG
TTTGGGGCGAGCAGGGTTGTTGGGGTGGATTTGAGTGAGAGGAAGTTGGA
GTTTGCGGAAAGTGTGGTTGGGAAGAGGGTTTGGGGGGGTGGGTTTGTTC
CATCAGGAGATGCGGAGGATGGAAGGAGGTTGGTGGAGGGATTTTGTGGG
AGTGATGATGATGAGGCAGGGTTCGATGTTGTTATTGAGGCTACGGGGGC
AGAGGCTTGTATTAACTTGGGCATAGAGGTGGTGAAGGTTGGAGGGGCGT
TTATGCAGACGGGGCTGGGGAGGAAGAATGTGAGTTTTCCCATTGGAACG
GTGGTTGCGAAGGAGGTTGTCGTTAAGGGGTGTTTTCGGTATGGGCCGGG
GGATTACAAGCTCGGGATGCAGATGGCTGTGGAGGGGAGGATTCCGCTGA
AGAGGTTTATTACCAAGGTGGTAGGTTTTGAGGATGCCGTTGAGGCGTGG
GAGACTACGGCTAGGGGGGAAGGGATTAAGACGTTGATCAGAGGGGTGGA
TACGCCGGTGGAAGTGTAGATGGGCTCCATCTCCCTCACCGACATGTCCA
ACCCCTCGTGCCTCCTCTACGGCGCCCACGACGCCCGCTACGAAGACCGA
CCCATCCCCACCATCACTTCCCCAACAGATGTAATAATCCGCATTGCCTA
CACAGGCGTCTGCGGCAGCGACGTCCACTTCTACCACCACGGCGGCATCC
ACCGCCCCATAACCCCCTCCAACCCGATAACAATGGGCCATGAATCCACC
GGCATCATCCACGCCATCGGCCCGGCCGTAACCACCCTCTCCCCAGGCGA
CCCCGTAGCCCTCGAACCCGGTTACGCATGCCACCGCTGTAATCTTTGCA
AATCCGGACGGTATAATCTGTGCCGGGAGATGAAGTTCGCCGCGGTCCCT
GGCATATGTCACGGCACCCTCACGCGGTTCTTCAAGTTACCTGCTGATTA
CTGCTACCGGATTCCGGAGGGGACATTAGGATTGGATGAGGCGACGCTGT
TGGAGCCGTTGGGGGTGGCGGTGCGGTCTGTGAGGGAGGTGGGGGTAAAG
CCTGGGATGAGGGTGGTGGTTTTTGGGGCGGGGACTGTCGGGGTGTTGTG
TATGGCCGTGGCGAGGGAGTTTGGGGCGAGCAGGGTTGTTGGGGTGGATT
TGAGTGAGAGGAAGTTGGAGTTTGCGGAAAGTGTGGTTGGGAAGAGGGTT
TGGGGGGGTGGGTTTGTTCCATCAGGAGATGCGGAGGATGGAAGGAGGTT
GGTGGAGGGATTTTGTGGGAGTGATGATGATGAGGCAGGGTTCGATGTTG
TTATTGAGGCTACGGGGGCAGAGGCTTGTATTAACTTGGGCATAGAGGTG
GTGAAGGTTGGAGGGGCGTTTATGCAGACGGGGCTGGGGAGGAAGAATGT
GAGTTTTCCCATTGGAACGGTGGTTGCGAAGGAGGTTGTCGTTAAGGGGT
GTTTTCGGTATGGGCCGGGGGATTACAAGCTCGGGATGCAGATGGCTGTG
GAGGGGAGGATTCCGCTGAAGAGGTTTATTACCAAGGTGGTAGGTTTTGA
GGATGCCGTTGAGGCGTGGGAGACTACGGCTAGGGGGGAAGGGATTAAGA
CGTTGATCAGAGGGGTGGATACGCCGGTGGAAGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004159-T1.utr5p1 | KJC3_004159-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002328 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR013149 |
| DBxref | PFAM:PF00107 |
| DBxref | PFAM:PF08240 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4095402..4096675 + |
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