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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4096621..4098088- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004160-T1 ID=KJC3_004160-T1|Name=KJC3_004160-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1468bp|location=Sequence derived from alignment at ch3:4096621..4098088- (Aspergillus niger KJC3)
CCGACGTCATTGGCTTACGGACTGACTTCATCGCCAAAAGCCATTATTAA
TCTCAATAACTCTCAGAAGTGATATAACGGAGCTATTACCCATAAACAAA
TAGACACAATCCATAATCTAGCCCTTCAAGAACTTCTACAGAAGCAAAAT
GACTACTCTCCCGAAGATCTTCATGTACCACTCCATCCAATCTCACCCCA
GATATACCCCACTAACAATTGACTTTCAGCACCGGCGCAACCGGCTACAT
CGGCGGCGACGCCCTCTACGCCATCTTTGCCAAGCACCCCGAATATAAAT
ACACCGTGCTGGTGCGCTCTCCAGAGAAAGCCGAAAAGGTCCAAGTCCAG
TACCCTTCTATCCGGGTTGTCATCGGCGATCTAGATGACTCTGCCCTTTT
GGAGAAGGAGAGTGCTGAAGCTGATATCGTTTTGCGTATGCCAAGCCCTA
CCTACCTGTTATATATATTTCATATATTAATAACTAGCAGACACCGCCGA
CGCCTCCGACCACGAAGGCGCCGCGAACGCCATCGCCAAGGGCCTAGAAA
AAGGCCACAGCAAAGAAAAGCCCGGATACTGGCTTCACACTGGCGGCACA
GGTATCTTGACGTTCCATGACACGGATCGGAATGTGTTCGGGGAGGGTAG
CGACAAGGTCTATGATGACTGGGATGGAGTGGACGAATTGTTGAACCTGC
CGGAGCATGCGTTCCATCGAAATGTGGATCGGGTGGTGTTGGAGACGGCG
AAGGCGAAAGGGGATGTGGTGAAGACGGCATTGGTGTGCCCGCCTACTAT
TTATGGTATGTTTAGACATTTCTTCTAAGTGGGATACTGCTAAGGCGTGG
TTCTATAGGACGTGGTCGAGGCCCCGTATCCGTGCGCGGACGACAAGTCT
ACGAGCTGGCCAAGGTGACACTGCAGCTTAAGAAGGCGCCACTCATCGGA
GATGGTAAGTCGATATGGAATAATATCCATATCTATGATTTGAGTGAGCT
GTATGTCCTGCTTGTGGAGGCGGCTGTGCATGGACGGGATGATCCTGAGC
TGTGGGGGGAGAGGGCGTATTATCTCACTGAGAACGGGGAGCATGTTTGG
GGTGAGTTGGCTGTGGCGACGGCATTGACGGCGACGGAGCTAGGCTTGCT
TTCTAATGTCGAGAAGGAGAAGATTAGTCTGGAGGACGCGAAGAGGTATG
GTGGGTATGAGGCGTTAAGTTGGGGATTGAATTCGAGGGGACGCGCCAGG
AGAGGAGCCAAGGTGCTGGGATGGACACCGACACAGCCGAGTATTGAGGC
GACGCTGCCGGAGGTCTTGGAGGACGAGGTGAAGAGGATGACTACTCAGA
CACAGAGGGTATAGTGCGGATGCATGTGAAGGATATAGGTATAGCTAGCT
ATCCAATGAACAGCTACACTTCCACCGGCGTATCCACCCCTCTGATCAAC
GTCTTAATCCCTTCCCCC back to topCoding sequence (CDS) from alignment at ch3:4096621..4098088- >KJC3_004160-T1 ID=KJC3_004160-T1|Name=KJC3_004160-T1|organism=Aspergillus niger KJC3|type=CDS|length=4212bp|location=Sequence derived from alignment at ch3:4096621..4098088- (Aspergillus niger KJC3)
GACGTGGTCGAGGCCCCGTATCCGTGCGCGGACGACAAGTCTACGAGCTG
GCCAAGGTGACACTGCAGCTTAAGAAGGCGCCACTCATCGGAGATGGTAA
GTCGATATGGAATAATATCCATATCTATGATTTGAGTGAGCTGTATGTCC
TGCTTGTGGAGGCGGCTGTGCATGGACGGGATGATCCTGAGCTGTGGGGG
GAGAGGGCGTATTATCTCACTGAGAACGGGGAGCATGTTTGGGGTGAGTT
GGCTGTGGCGACGGCATTGACGGCGACGGAGCTAGGCTTGCTTTCTAATG
TCGAGAAGGAGAAGATTAGTCTGGAGGACGCGAAGAGGTATGGTGGGTAT
GAGGCGTTAAGTTGGGGATTGAATTCGAGGGGACGCGCCAGGAGAGGAGC
CAAGGTGCTGGGATGGACACCGACACAGCCGAGTATTGAGGCGACGCTGC
CGGAGGTCTTGGAGGACGAGGTGAAGAGGATGACTACTCAGACACAGAGG
GTATAGACACCGCCGACGCCTCCGACCACGAAGGCGCCGCGAACGCCATC
GCCAAGGGCCTAGAAAAAGGCCACAGCAAAGAAAAGCCCGGATACTGGCT
TCACACTGGCGGCACAGGTATCTTGACGTTCCATGACACGGATCGGAATG
TGTTCGGGGAGGGTAGCGACAAGGTCTATGATGACTGGGATGGAGTGGAC
GAATTGTTGAACCTGCCGGAGCATGCGTTCCATCGAAATGTGGATCGGGT
GGTGTTGGAGACGGCGAAGGCGAAAGGGGATGTGGTGAAGACGGCATTGG
TGTGCCCGCCTACTATTTATGCACCGGCGCAACCGGCTACATCGGCGGCG
ACGCCCTCTACGCCATCTTTGCCAAGCACCCCGAATATAAATACACCGTG
CTGGTGCGCTCTCCAGAGAAAGCCGAAAAGGTCCAAGTCCAGTACCCTTC
TATCCGGGTTGTCATCGGCGATCTAGATGACTCTGCCCTTTTGGAGAAGG
AGAGTGCTGAAGCTGATATCGTTTTGCATGACTACTCTCCCGAAGATCTT
CATGACGTGGTCGAGGCCCCGTATCCGTGCGCGGACGACAAGTCTACGAG
CTGGCCAAGGTGACACTGCAGCTTAAGAAGGCGCCACTCATCGGAGATGG
TAAGTCGATATGGAATAATATCCATATCTATGATTTGAGTGAGCTGTATG
TCCTGCTTGTGGAGGCGGCTGTGCATGGACGGGATGATCCTGAGCTGTGG
GGGGAGAGGGCGTATTATCTCACTGAGAACGGGGAGCATGTTTGGGGTGA
GTTGGCTGTGGCGACGGCATTGACGGCGACGGAGCTAGGCTTGCTTTCTA
ATGTCGAGAAGGAGAAGATTAGTCTGGAGGACGCGAAGAGGTATGGTGGG
TATGAGGCGTTAAGTTGGGGATTGAATTCGAGGGGACGCGCCAGGAGAGG
AGCCAAGGTGCTGGGATGGACACCGACACAGCCGAGTATTGAGGCGACGC
TGCCGGAGGTCTTGGAGGACGAGGTGAAGAGGATGACTACTCAGACACAG
AGGGTATAGACACCGCCGACGCCTCCGACCACGAAGGCGCCGCGAACGCC
ATCGCCAAGGGCCTAGAAAAAGGCCACAGCAAAGAAAAGCCCGGATACTG
GCTTCACACTGGCGGCACAGGTATCTTGACGTTCCATGACACGGATCGGA
ATGTGTTCGGGGAGGGTAGCGACAAGGTCTATGATGACTGGGATGGAGTG
GACGAATTGTTGAACCTGCCGGAGCATGCGTTCCATCGAAATGTGGATCG
GGTGGTGTTGGAGACGGCGAAGGCGAAAGGGGATGTGGTGAAGACGGCAT
TGGTGTGCCCGCCTACTATTTATGCACCGGCGCAACCGGCTACATCGGCG
GCGACGCCCTCTACGCCATCTTTGCCAAGCACCCCGAATATAAATACACC
GTGCTGGTGCGCTCTCCAGAGAAAGCCGAAAAGGTCCAAGTCCAGTACCC
TTCTATCCGGGTTGTCATCGGCGATCTAGATGACTCTGCCCTTTTGGAGA
AGGAGAGTGCTGAAGCTGATATCGTTTTGCATGACTACTCTCCCGAAGAT
CTTCATGACGTGGTCGAGGCCCCGTATCCGTGCGCGGACGACAAGTCTAC
GAGCTGGCCAAGGTGACACTGCAGCTTAAGAAGGCGCCACTCATCGGAGA
TGGTAAGTCGATATGGAATAATATCCATATCTATGATTTGAGTGAGCTGT
ATGTCCTGCTTGTGGAGGCGGCTGTGCATGGACGGGATGATCCTGAGCTG
TGGGGGGAGAGGGCGTATTATCTCACTGAGAACGGGGAGCATGTTTGGGG
TGAGTTGGCTGTGGCGACGGCATTGACGGCGACGGAGCTAGGCTTGCTTT
CTAATGTCGAGAAGGAGAAGATTAGTCTGGAGGACGCGAAGAGGTATGGT
GGGTATGAGGCGTTAAGTTGGGGATTGAATTCGAGGGGACGCGCCAGGAG
AGGAGCCAAGGTGCTGGGATGGACACCGACACAGCCGAGTATTGAGGCGA
CGCTGCCGGAGGTCTTGGAGGACGAGGTGAAGAGGATGACTACTCAGACA
CAGAGGGTATAGACACCGCCGACGCCTCCGACCACGAAGGCGCCGCGAAC
GCCATCGCCAAGGGCCTAGAAAAAGGCCACAGCAAAGAAAAGCCCGGATA
CTGGCTTCACACTGGCGGCACAGGTATCTTGACGTTCCATGACACGGATC
GGAATGTGTTCGGGGAGGGTAGCGACAAGGTCTATGATGACTGGGATGGA
GTGGACGAATTGTTGAACCTGCCGGAGCATGCGTTCCATCGAAATGTGGA
TCGGGTGGTGTTGGAGACGGCGAAGGCGAAAGGGGATGTGGTGAAGACGG
CATTGGTGTGCCCGCCTACTATTTATGCACCGGCGCAACCGGCTACATCG
GCGGCGACGCCCTCTACGCCATCTTTGCCAAGCACCCCGAATATAAATAC
ACCGTGCTGGTGCGCTCTCCAGAGAAAGCCGAAAAGGTCCAAGTCCAGTA
CCCTTCTATCCGGGTTGTCATCGGCGATCTAGATGACTCTGCCCTTTTGG
AGAAGGAGAGTGCTGAAGCTGATATCGTTTTGCATGACTACTCTCCCGAA
GATCTTCATGACGTGGTCGAGGCCCCGTATCCGTGCGCGGACGACAAGTC
TACGAGCTGGCCAAGGTGACACTGCAGCTTAAGAAGGCGCCACTCATCGG
AGATGGTAAGTCGATATGGAATAATATCCATATCTATGATTTGAGTGAGC
TGTATGTCCTGCTTGTGGAGGCGGCTGTGCATGGACGGGATGATCCTGAG
CTGTGGGGGGAGAGGGCGTATTATCTCACTGAGAACGGGGAGCATGTTTG
GGGTGAGTTGGCTGTGGCGACGGCATTGACGGCGACGGAGCTAGGCTTGC
TTTCTAATGTCGAGAAGGAGAAGATTAGTCTGGAGGACGCGAAGAGGTAT
GGTGGGTATGAGGCGTTAAGTTGGGGATTGAATTCGAGGGGACGCGCCAG
GAGAGGAGCCAAGGTGCTGGGATGGACACCGACACAGCCGAGTATTGAGG
CGACGCTGCCGGAGGTCTTGGAGGACGAGGTGAAGAGGATGACTACTCAG
ACACAGAGGGTATAGACACCGCCGACGCCTCCGACCACGAAGGCGCCGCG
AACGCCATCGCCAAGGGCCTAGAAAAAGGCCACAGCAAAGAAAAGCCCGG
ATACTGGCTTCACACTGGCGGCACAGGTATCTTGACGTTCCATGACACGG
ATCGGAATGTGTTCGGGGAGGGTAGCGACAAGGTCTATGATGACTGGGAT
GGAGTGGACGAATTGTTGAACCTGCCGGAGCATGCGTTCCATCGAAATGT
GGATCGGGTGGTGTTGGAGACGGCGAAGGCGAAAGGGGATGTGGTGAAGA
CGGCATTGGTGTGCCCGCCTACTATTTATGCACCGGCGCAACCGGCTACA
TCGGCGGCGACGCCCTCTACGCCATCTTTGCCAAGCACCCCGAATATAAA
TACACCGTGCTGGTGCGCTCTCCAGAGAAAGCCGAAAAGGTCCAAGTCCA
GTACCCTTCTATCCGGGTTGTCATCGGCGATCTAGATGACTCTGCCCTTT
TGGAGAAGGAGAGTGCTGAAGCTGATATCGTTTTGCATGACTACTCTCCC
GAAGATCTTCAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004160-T1.utr3p1 | KJC3_004160-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004160-T1.utr5p1 | KJC3_004160-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | PFAM:PF01118 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4096621..4098088 - |
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