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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4107765..4110469- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004167-T1 ID=KJC3_004167-T1|Name=KJC3_004167-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2705bp|location=Sequence derived from alignment at ch3:4107765..4110469- (Aspergillus niger KJC3) CTGTATAATATATATTCTGAAATTATTCATCGGTATTCTACGTCAAGGCC
ACTCCAATGACTGACCAATCGCTTGTATTCCGCTAAGGATGCCAATCGCA
GCGCTCCCCCTAGCAGCGGTGCGGGCAATTGGCTCCGCGTCTGTTATTTC
CGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGCCTTGGATGCAG
CAGCCACTTCGGTACTTATTGAGATCTCACAAAATACACTTGACATAATA
CAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGATCATCCTTTTGT
CTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCGAAGATCTTAGAA
CTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCACTTGCTAGTGCA
GCTGAGGTATCTGGCGGCGTGGCTATCACAACTAGAGTACAGCATGAGCC
GGTTGGTTCTTCTATCAAATACGGCAGAAATGGAGAGCTTCTAAGGTGAT
TCCTACCGCCAATTGAGATAACCAAAGCTGACCGATGCAGTACCCAGCGA
GCGTCACATCCGGTAGGAACCAGTGTTCGCATAACGGATTTGTTCAAACA
CATCCCAGTCCGGAGACAAACTACGTTAAAGAATGCGGCCAAGACGGTCG
TGAGGATCAAGAAGCTCGTACAAGCATACGCTATTGCCCAACCCTCCAAA
CGTCTATCCTTGAAGGTCCTCAAAGCAAAGACAGAGACGAATAACTGGAT
GTGTGCCCCAGGCAACAACACTAGCCTTGTAGATGCAGTATTGAAAGTTG
TGGGCACCGAAGCTGCCTCTAGCTGTCTGGTCAAGGTCTGGCCATCTGAG
ATTGACAGCGACAGGCCATTTCGGATGCTCGCGTTCCTTCCAAAGCCAGA
ATCCGGTATGTAGCTGCTCTGTGGGTCCCCGAGTGCGACTGACGGTGTTA
GACCTTACGAAAGTGAACGGCTCGGGGCAGTATATCAGTATCGATGGCAG
GCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACTATATA
AGTCTTATATTCGTCTCGTTGCTTCCAGTAAGGAGGCAGCTGCAAACATT
ACAGATCCGCTTCTGTGTCTTCATCTCAAGTGTACTAATGCAAGCTACGA
CGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGACCGGGAAG
AGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGCGTACGGCGTCGAA
GCAAAACCAACTGAGAGACCAAGAACTATCGATAAAGGGAAAGAGCCCGC
TTCCTATCAGAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCCGGATG
AATCAAGGGCTAAAAGCAGTTATGGCTCTTCGTCGACACCACGGACTCCG
GCTTTAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCTGGAGAAGAG
AATCGCGATTAGCAACCCCTGGTCAATATCTAAGCCAAGCAAGCAGATGC
CGACGCGCGACAGTTCCTCATCGCGCAGTGATACGGACAAGATAGTGAGA
CATCAAATTGTGCGGTATCCGACTGAAAGCAGAAGAAACTCACGGGAAAC
GCTACAAACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTGCTACCT
CGACGACTGCTCCTGGCTACGTGACTGAAGCTCAGTCTTCGCCGTCTAGT
CCAGGGACGCCTCAAACTCCTCTTCCCAGGACAAGGCAAGCCTCGTTGGA
CCATGACAGACATCCCAGAAACGGAGCCCTTGATAACTGGTTGGGGAAAA
CCCCAGCCTCCTTGTCTCAGTCAACCATAGGCGAGGTGCCCATAGGAAAT
GGGGACGAGCGCTCATTGCAGCAGTTGGCGCAAGAAAGATTCGGTTCACC
AGAAAGGTCATCAGGTGATCCAGGATCGATAGAGGGTGGCGTTGTTACTA
ATAATCAGTCTCCCGAATCTCAGGCTAGCTCTGCAGAAGCAGAAACGGAG
CCTGAAGGAGCTGGCTCTCCCTTGCTTAAGAGTACTGCAGACCTTGAACT
TCGAGAAAGCCACGCACCCGACCGTGGAAGGTCCTCGGCTACTCTACGTC
AGCTTCTTTCTGAGAATAACCACCAGGAGCTGGGACGTGCACTCGACTTT
GAGAACCGCAAGAGGGAGGCTATCCTTAAGCGCCGGGAACAACTCAAAAG
CCAGCGAAACCCGAGCTCACCCCATCTAAGTCGGTATCTAGCTGCCAAAG
CCGCACTCCAGAAGCACCCAGATGCTGATCGGGACGAGCCGACGAAGCCT
GTGCTGGGTCCACATGACCCACGGTCGTATCTAATGCGTTACAAGGTGCA
AGATCAGAACGAAGATGGCATATCAAAGACCAGAAGGATTAACACAGAGA
AGCTGCCATTAGAAAACATTCCAAATGGGTGTGAGTTGTACAGTCTGGCT
CTGACCCAAGAGGCCGACATCTCGCTCATTTCAACCACATGCGACCATTT
AACCAAGACAGATCTTTATACCGGATGCGGAGACCAGTGTGAAGCATTTA
ACCCGCCACATAAAGATACAGAAACAATGCTTGATCTCTGGAGGAATCAA
CTGACGAGTTTGATACAGCGCAATTACCGGACTTCAGAACGGTCGGGATT
GCCGGATGTGCACTTGAATTTCTCTCGTTTAGCGCAGCGCGGGCATTCCA
AGTGA back to topCoding sequence (CDS) from alignment at ch3:4107765..4110469- >KJC3_004167-T1 ID=KJC3_004167-T1|Name=KJC3_004167-T1|organism=Aspergillus niger KJC3|type=CDS|length=7578bp|location=Sequence derived from alignment at ch3:4107765..4110469- (Aspergillus niger KJC3) ACCTTACGAAAGTGAACGGCTCGGGGCAGTATATCAGTATCGATGGCAGG CCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACTATATAA GTCTTATATTCGTCTCGTTGCTTCCAGTAAGGAGGCAGCTGCAAACATTA CAGATCCGCTTCTGTGTCTTCATCTCAAGTGTACTAATGCAAGCTACGAC GTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGACCGGGAAGA GCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGCGTACGGCGTCGAAG CAAAACCAACTGAGAGACCAAGAACTATCGATAAAGGGAAAGAGCCCGCT TCCTATCAGAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCCGGATGA ATCAAGGGCTAAAAGCAGTTATGGCTCTTCGTCGACACCACGGACTCCGG CTTTAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCTGGAGAAGAGA ATCGCGATTAGCAACCCCTGGTCAATATCTAAGCCAAGCAAGCAGATGCC GACGCGCGACAGTTCCTCATCGCGCAGTGATACGGACAAGATAGTGAGAC ATCAAATTGTGCGGTATCCGACTGAAAGCAGAAGAAACTCACGGGAAACG CTACAAACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTGCTACCTC GACGACTGCTCCTGGCTACGTGACTGAAGCTCAGTCTTCGCCGTCTAGTC CAGGGACGCCTCAAACTCCTCTTCCCAGGACAAGGCAAGCCTCGTTGGAC CATGACAGACATCCCAGAAACGGAGCCCTTGATAACTGGTTGGGGAAAAC CCCAGCCTCCTTGTCTCAGTCAACCATAGGCGAGGTGCCCATAGGAAATG GGGACGAGCGCTCATTGCAGCAGTTGGCGCAAGAAAGATTCGGTTCACCA GAAAGGTCATCAGGTGATCCAGGATCGATAGAGGGTGGCGTTGTTACTAA TAATCAGTCTCCCGAATCTCAGGCTAGCTCTGCAGAAGCAGAAACGGAGC CTGAAGGAGCTGGCTCTCCCTTGCTTAAGAGTACTGCAGACCTTGAACTT CGAGAAAGCCACGCACCCGACCGTGGAAGGTCCTCGGCTACTCTACGTCA GCTTCTTTCTGAGAATAACCACCAGGAGCTGGGACGTGCACTCGACTTTG AGAACCGCAAGAGGGAGGCTATCCTTAAGCGCCGGGAACAACTCAAAAGC CAGCGAAACCCGAGCTCACCCCATCTAAGTCGGTATCTAGCTGCCAAAGC CGCACTCCAGAAGCACCCAGATGCTGATCGGGACGAGCCGACGAAGCCTG TGCTGGGTCCACATGACCCACGGTCGTATCTAATGCGTTACAAGGTGCAA GATCAGAACGAAGATGGCATATCAAAGACCAGAAGGATTAACACAGAGAA GCTGCCATTAGAAAACATTCCAAATGGGTGTGAGTTGTACAGTCTGGCTC TGACCCAAGAGGCCGACATCTCGCTCATTTCAACCACATGCGACCATTTA ACCAAGACAGATCTTTATACCGGATGCGGAGACCAGTGTGAAGCATTTAA CCCGCCACATAAAGATACAGAAACAATGCTTGATCTCTGGAGGAATCAAC TGACGAGTTTGATACAGCGCAATTACCGGACTTCAGAACGGTCGGGATTG CCGGATGTGCACTTGAATTTCTCTCGTTTAGCGCAGCGCGGGCATTCCAA GTGATACCCAGCGAGCGTCACATCCGGTAGGAACCAGTGTTCGCATAACG GATTTGTTCAAACACATCCCAGTCCGGAGACAAACTACGTTAAAGAATGC GGCCAAGACGGTCGTGAGGATCAAGAAGCTCGTACAAGCATACGCTATTG CCCAACCCTCCAAACGTCTATCCTTGAAGGTCCTCAAAGCAAAGACAGAG ACGAATAACTGGATGTGTGCCCCAGGCAACAACACTAGCCTTGTAGATGC AGTATTGAAAGTTGTGGGCACCGAAGCTGCCTCTAGCTGTCTGGTCAAGG TCTGGCCATCTGAGATTGACAGCGACAGGCCATTTCGGATGCTCGCGTTC CTTCCAAAGCCAGAATCCGATGCCAATCGCAGCGCTCCCCCTAGCAGCGG TGCGGGCAATTGGCTCCGCGTCTGTTATTTCCGATCCTTGCTCCATTGTC AAGGAGCTCCTGGACAACGCCTTGGATGCAGCAGCCACTTCGGTACTTAT TGAGATCTCACAAAATACACTTGACATAATACAAGTGAAAGACAATGGCC ATGGTATCCCCTCTACCGATCATCCTTTTGTCTGCAAACGCACCTTCACT AGCAAAATTCAATCCGTCGAAGATCTTAGAACTATCGGCGGAAAGTCTCT AGGTTTTAGAGGCGAAGCACTTGCTAGTGCAGCTGAGGTATCTGGCGGCG TGGCTATCACAACTAGAGTACAGCATGAGCCGGTTGGTTCTTCTATCAAA TACGGCAGAAATGGAGAGCTTCTAAGACCTTACGAAAGTGAACGGCTCGG GGCAGTATATCAGTATCGATGGCAGGCCCTTATCGACCACCCGAGGGATC GCGCAAGATATTGCGAAACTATATAAGTCTTATATTCGTCTCGTTGCTTC CAGTAAGGAGGCAGCTGCAAACATTACAGATCCGCTTCTGTGTCTTCATC TCAAGTGTACTAATGCAAGCTACGACGTCAACATTGAGCCCGCTAAAGAT GATGTTCTTCTTGAAGACCGGGAAGAGCTTCTTTCTTTGGTAGAAGAGCT TTTGTGTGATGCGTACGGCGTCGAAGCAAAACCAACTGAGAGACCAAGAA CTATCGATAAAGGGAAAGAGCCCGCTTCCTATCAGAACTCATTCGAATTG CTTCTTGCCCGTAAAAGTCCGGATGAATCAAGGGCTAAAAGCAGTTATGG CTCTTCGTCGACACCACGGACTCCGGCTTTAGAGGATCCAGACAGCTTCA ATACTGAGAATCGTCTGGAGAAGAGAATCGCGATTAGCAACCCCTGGTCA ATATCTAAGCCAAGCAAGCAGATGCCGACGCGCGACAGTTCCTCATCGCG CAGTGATACGGACAAGATAGTGAGACATCAAATTGTGCGGTATCCGACTG AAAGCAGAAGAAACTCACGGGAAACGCTACAAACATGCTCTCCAGGGTCT CTCCTACCGAGTCCCTCTGCTACCTCGACGACTGCTCCTGGCTACGTGAC TGAAGCTCAGTCTTCGCCGTCTAGTCCAGGGACGCCTCAAACTCCTCTTC CCAGGACAAGGCAAGCCTCGTTGGACCATGACAGACATCCCAGAAACGGA GCCCTTGATAACTGGTTGGGGAAAACCCCAGCCTCCTTGTCTCAGTCAAC CATAGGCGAGGTGCCCATAGGAAATGGGGACGAGCGCTCATTGCAGCAGT TGGCGCAAGAAAGATTCGGTTCACCAGAAAGGTCATCAGGTGATCCAGGA TCGATAGAGGGTGGCGTTGTTACTAATAATCAGTCTCCCGAATCTCAGGC TAGCTCTGCAGAAGCAGAAACGGAGCCTGAAGGAGCTGGCTCTCCCTTGC TTAAGAGTACTGCAGACCTTGAACTTCGAGAAAGCCACGCACCCGACCGT GGAAGGTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAATAACCACCA GGAGCTGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGAGGCTATCC TTAAGCGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCTCACCCCAT CTAAGTCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCACCCAGATGC TGATCGGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGACCCACGGT CGTATCTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATGGCATATCA AAGACCAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAACATTCCAAA TGGGTGTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGACATCTCGC TCATTTCAACCACATGCGACCATTTAACCAAGACAGATCTTTATACCGGA TGCGGAGACCAGTGTGAAGCATTTAACCCGCCACATAAAGATACAGAAAC AATGCTTGATCTCTGGAGGAATCAACTGACGAGTTTGATACAGCGCAATT ACCGGACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGAATTTCTCT CGTTTAGCGCAGCGCGGGCATTCCAAGTGATACCCAGCGAGCGTCACATC CGGTAGGAACCAGTGTTCGCATAACGGATTTGTTCAAACACATCCCAGTC CGGAGACAAACTACGTTAAAGAATGCGGCCAAGACGGTCGTGAGGATCAA GAAGCTCGTACAAGCATACGCTATTGCCCAACCCTCCAAACGTCTATCCT TGAAGGTCCTCAAAGCAAAGACAGAGACGAATAACTGGATGTGTGCCCCA GGCAACAACACTAGCCTTGTAGATGCAGTATTGAAAGTTGTGGGCACCGA AGCTGCCTCTAGCTGTCTGGTCAAGGTCTGGCCATCTGAGATTGACAGCG ACAGGCCATTTCGGATGCTCGCGTTCCTTCCAAAGCCAGAATCCGATGCC AATCGCAGCGCTCCCCCTAGCAGCGGTGCGGGCAATTGGCTCCGCGTCTG TTATTTCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGCCTTG GATGCAGCAGCCACTTCGGTACTTATTGAGATCTCACAAAATACACTTGA CATAATACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGATCATC CTTTTGTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCGAAGAT CTTAGAACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCACTTGC TAGTGCAGCTGAGGTATCTGGCGGCGTGGCTATCACAACTAGAGTACAGC ATGAGCCGGTTGGTTCTTCTATCAAATACGGCAGAAATGGAGAGCTTCTA AGACCTTACGAAAGTGAACGGCTCGGGGCAGTATATCAGTATCGATGGCA GGCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACTATAT AAGTCTTATATTCGTCTCGTTGCTTCCAGTAAGGAGGCAGCTGCAAACAT TACAGATCCGCTTCTGTGTCTTCATCTCAAGTGTACTAATGCAAGCTACG ACGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGACCGGGAA GAGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGCGTACGGCGTCGA AGCAAAACCAACTGAGAGACCAAGAACTATCGATAAAGGGAAAGAGCCCG CTTCCTATCAGAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCCGGAT GAATCAAGGGCTAAAAGCAGTTATGGCTCTTCGTCGACACCACGGACTCC GGCTTTAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCTGGAGAAGA GAATCGCGATTAGCAACCCCTGGTCAATATCTAAGCCAAGCAAGCAGATG CCGACGCGCGACAGTTCCTCATCGCGCAGTGATACGGACAAGATAGTGAG ACATCAAATTGTGCGGTATCCGACTGAAAGCAGAAGAAACTCACGGGAAA CGCTACAAACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTGCTACC TCGACGACTGCTCCTGGCTACGTGACTGAAGCTCAGTCTTCGCCGTCTAG TCCAGGGACGCCTCAAACTCCTCTTCCCAGGACAAGGCAAGCCTCGTTGG ACCATGACAGACATCCCAGAAACGGAGCCCTTGATAACTGGTTGGGGAAA ACCCCAGCCTCCTTGTCTCAGTCAACCATAGGCGAGGTGCCCATAGGAAA TGGGGACGAGCGCTCATTGCAGCAGTTGGCGCAAGAAAGATTCGGTTCAC CAGAAAGGTCATCAGGTGATCCAGGATCGATAGAGGGTGGCGTTGTTACT AATAATCAGTCTCCCGAATCTCAGGCTAGCTCTGCAGAAGCAGAAACGGA GCCTGAAGGAGCTGGCTCTCCCTTGCTTAAGAGTACTGCAGACCTTGAAC TTCGAGAAAGCCACGCACCCGACCGTGGAAGGTCCTCGGCTACTCTACGT CAGCTTCTTTCTGAGAATAACCACCAGGAGCTGGGACGTGCACTCGACTT TGAGAACCGCAAGAGGGAGGCTATCCTTAAGCGCCGGGAACAACTCAAAA GCCAGCGAAACCCGAGCTCACCCCATCTAAGTCGGTATCTAGCTGCCAAA GCCGCACTCCAGAAGCACCCAGATGCTGATCGGGACGAGCCGACGAAGCC TGTGCTGGGTCCACATGACCCACGGTCGTATCTAATGCGTTACAAGGTGC AAGATCAGAACGAAGATGGCATATCAAAGACCAGAAGGATTAACACAGAG AAGCTGCCATTAGAAAACATTCCAAATGGGTGTGAGTTGTACAGTCTGGC TCTGACCCAAGAGGCCGACATCTCGCTCATTTCAACCACATGCGACCATT TAACCAAGACAGATCTTTATACCGGATGCGGAGACCAGTGTGAAGCATTT AACCCGCCACATAAAGATACAGAAACAATGCTTGATCTCTGGAGGAATCA ACTGACGAGTTTGATACAGCGCAATTACCGGACTTCAGAACGGTCGGGAT TGCCGGATGTGCACTTGAATTTCTCTCGTTTAGCGCAGCGCGGGCATTCC AAGTGATACCCAGCGAGCGTCACATCCGGTAGGAACCAGTGTTCGCATAA CGGATTTGTTCAAACACATCCCAGTCCGGAGACAAACTACGTTAAAGAAT GCGGCCAAGACGGTCGTGAGGATCAAGAAGCTCGTACAAGCATACGCTAT TGCCCAACCCTCCAAACGTCTATCCTTGAAGGTCCTCAAAGCAAAGACAG AGACGAATAACTGGATGTGTGCCCCAGGCAACAACACTAGCCTTGTAGAT GCAGTATTGAAAGTTGTGGGCACCGAAGCTGCCTCTAGCTGTCTGGTCAA GGTCTGGCCATCTGAGATTGACAGCGACAGGCCATTTCGGATGCTCGCGT TCCTTCCAAAGCCAGAATCCGATGCCAATCGCAGCGCTCCCCCTAGCAGC GGTGCGGGCAATTGGCTCCGCGTCTGTTATTTCCGATCCTTGCTCCATTG TCAAGGAGCTCCTGGACAACGCCTTGGATGCAGCAGCCACTTCGGTACTT ATTGAGATCTCACAAAATACACTTGACATAATACAAGTGAAAGACAATGG CCATGGTATCCCCTCTACCGATCATCCTTTTGTCTGCAAACGCACCTTCA CTAGCAAAATTCAATCCGTCGAAGATCTTAGAACTATCGGCGGAAAGTCT CTAGGTTTTAGAGGCGAAGCACTTGCTAGTGCAGCTGAGGTATCTGGCGG CGTGGCTATCACAACTAGAGTACAGCATGAGCCGGTTGGTTCTTCTATCA AATACGGCAGAAATGGAGAGCTTCTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006298 | mismatch repair |
Vocabulary: Molecular Function
Term | Definition |
GO:0030983 | mismatched DNA binding |
GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_004167-T1.utr5p1 | KJC3_004167-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR020568 |
DBxref | InterPro:IPR014762 |
DBxref | InterPro:IPR003594 |
DBxref | InterPro:IPR036890 |
DBxref | InterPro:IPR014721 |
DBxref | InterPro:IPR013507 |
DBxref | PFAM:PF02518 |
DBxref | PFAM:PF01119 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:4107765..4110469 - |
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