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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4110654..4112280+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004168-T1 ID=KJC3_004168-T1|Name=KJC3_004168-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1627bp|location=Sequence derived from alignment at ch3:4110654..4112280+ (Aspergillus niger KJC3)
GCCAGTGGATGGATTCAGAGATGTGATGTGCAACCAGCATGGCTAGCTCT
CCATTCCGGTTGTCGCAACTGGCGATTCCATCAGTTTGCATCTTAATTAG
CTTCCTCGCATACAGCTCGCAGTACTTCTTCCTGTACTTCGAGCCAGCTC
CACTGAGAGACACTGAATTATGGCGCCTTAACATCTTTGCCCTGTGCATC
TGGATATGCTATTATCGAACCTGCACTGTAGATCCTGGTCACATTCCCAA
AGATTGGAAACCATTAGACAGTAAGCAACTGGAAGCCGACCGTGCTAGTG
GTCGTCAACGATGGTGCCGTAAATGTGAGGCATACAAGCCGCCAAGAGCC
CACCATTGCCGGACGTGCCAAAGGTTAGTTATGTCAATTCAATAGGTGGG
CTTCATACTGATACTGGATCTAGATGCATCCCCAAAATGGACCATCACTG
CCCATGGACCTCGAACTGTGTCTCGCACTTCACGTTCCCTCACTTCGTGC
GTTTTCTATTTTACGCCGTAACGGGAATGTCTTATCTTGAGACTCTTCTC
TATGAGAGAGCATCAATCATTTGGGCCTCCCGAAATCGTCCAAGCGTAAG
AGTATTACTCTAGACGAGTCTACAGAAGCTGATGCAGACGTGGCTTAGTA
TTTAGGGCCTAGTGCGCTGCAGATGGGCCATCTATTCGTTCTCCTTGTAG
TGAACAGCTTTACGGTCTTCTTTCTCATGATTCTCCTCGGTCGAACCATC
TGGTCTATGAGCATTAATACAACTACTATTGAAGAATGGGAAATTGAGAG
ACACCAAACACTGGTTCGTCGGTCCCGTCACTTCGGTGGGTATTTGACCG
GGCCAGGTGGCGTCAGGATTCGGATTAGAAAACAAGAATTCCCATACGAC
ATCGGGATCTGGTCCAATATCAAGGCGGGAATGGGTGGAACTGCAAATGT
TTGTTTGATTTTCCCATCACGTTTTGACTGAGCTGCGGGCTAATCTATTG
TATAGGTTCTTAGCTGGTTTTGGCCGTTGGCCAGGACACCTGACCGTCGG
ACGGGATTAGAGTTCGAAGTGAATGACTTCGAAGGTATGTGGATAAGACC
CAATATTAGATGACGGGCTGACCTCGGATAGATCCTGATGTTACCTGGCC
ACCCCCCGACCCAGATAGGATCCCGGTTACAGCTAGAGCAGCTATGGACG
ATGTTGAGCCCCGGACTCCGTCCATCTACGGGAGTGCAGGGGGAATGCCC
ATTGGGGGCCCGAAGGCTACTCTGAGAGCTAGCCAGGACATCAGACGTCG
TAAGCGCTTCCATGATCGGGCACAGGAAGAACTAAATCAGAGCGCGTCAT
CTCGGGAATCTTCGCCAGGTTACAGTTCTGAGCCCGAAGATGGTGAGGAA
GGCTGGAAGAACTCCGAAGGCGAGAGACTTCGTGACTTTGGAGTGGAAGA
GGACATTGAGTTTTACGACGAAGAGGACATCCCACTGGCCATTTTGATGC
AACAGAAAGCACAGCGACAATGAGCATACTCCCACTCTCGACTACAAGAT
TTATACCGTACATACATACCGATGCCAGCAGTAATTAGAATTTCCAAACA
TCAGCCTATAAAAATCATACTCTGGTC back to topCoding sequence (CDS) from alignment at ch3:4110654..4112280+ >KJC3_004168-T1 ID=KJC3_004168-T1|Name=KJC3_004168-T1|organism=Aspergillus niger KJC3|type=CDS|length=6390bp|location=Sequence derived from alignment at ch3:4110654..4112280+ (Aspergillus niger KJC3)
ATGGCTAGCTCTCCATTCCGGTTGTCGCAACTGGCGATTCCATCAGTTTG
CATCTTAATTAGCTTCCTCGCATACAGCTCGCAGTACTTCTTCCTGTACT
TCGAGCCAGCTCCACTGAGAGACACTGAATTATGGCGCCTTAACATCTTT
GCCCTGTGCATCTGGATATGCTATTATCGAACCTGCACTGTAGATCCTGG
TCACATTCCCAAAGATTGGAAACCATTAGACAGTAAGCAACTGGAAGCCG
ACCGTGCTAGTGGTCGTCAACGATGGTGCCGTAAATGTGAGGCATACAAG
CCGCCAAGAGCCCACCATTGCCGGACGTGCCAAAGATGCATCCCCAAAAT
GGACCATCACTGCCCATGGACCTCGAACTGTGTCTCGCACTTCACGTTCC
CTCACTTCGTGCGTTTTCTATTTTACGCCGTAACGGGAATGTCTTATCTT
GAGACTCTTCTCTATGAGAGAGCATCAATCATTTGGGCCTCCCGAAATCG
TCCAAGCTATTTAGGGCCTAGTGCGCTGCAGATGGGCCATCTATTCGTTC
TCCTTGTAGTGAACAGCTTTACGGTCTTCTTTCTCATGATTCTCCTCGGT
CGAACCATCTGGTCTATGAGCATTAATACAACTACTATTGAAGAATGGGA
AATTGAGAGACACCAAACACTGGTTCGTCGGTCCCGTCACTTCGGTGGGT
ATTTGACCGGGCCAGGTGGCGTCAGGATTCGGATTAGAAAACAAGAATTC
CCATACGACATCGGGATCTGGTCCAATATCAAGGCGGGAATGGGTGGAAC
TGCAAATGTTCTTAGCTGGTTTTGGCCGTTGGCCAGGACACCTGACCGTC
GGACGGGATTAGAGTTCGAAGTGAATGACTTCGAAGATCCTGATGTTACC
TGGCCACCCCCCGACCCAGATAGGATCCCGGTTACAGCTAGAGCAGCTAT
GGACGATGTTGAGCCCCGGACTCCGTCCATCTACGGGAGTGCAGGGGGAA
TGCCCATTGGGGGCCCGAAGGCTACTCTGAGAGCTAGCCAGGACATCAGA
CGTCGTAAGCGCTTCCATGATCGGGCACAGGAAGAACTAAATCAGAGCGC
GTCATCTCGGGAATCTTCGCCAGGTTACAGTTCTGAGCCCGAAGATGGTG
AGGAAGGCTGGAAGAACTCCGAAGGCGAGAGACTTCGTGACTTTGGAGTG
GAAGAGGACATTGAGTTTTACGACGAAGAGGACATCCCACTGGCCATTTT
GATGCAACAGAAAGCACAGCGACAATGAATGGCTAGCTCTCCATTCCGGT
TGTCGCAACTGGCGATTCCATCAGTTTGCATCTTAATTAGCTTCCTCGCA
TACAGCTCGCAGTACTTCTTCCTGTACTTCGAGCCAGCTCCACTGAGAGA
CACTGAATTATGGCGCCTTAACATCTTTGCCCTGTGCATCTGGATATGCT
ATTATCGAACCTGCACTGTAGATCCTGGTCACATTCCCAAAGATTGGAAA
CCATTAGACAGTAAGCAACTGGAAGCCGACCGTGCTAGTGGTCGTCAACG
ATGGTGCCGTAAATGTGAGGCATACAAGCCGCCAAGAGCCCACCATTGCC
GGACGTGCCAAAGATGCATCCCCAAAATGGACCATCACTGCCCATGGACC
TCGAACTGTGTCTCGCACTTCACGTTCCCTCACTTCGTGCGTTTTCTATT
TTACGCCGTAACGGGAATGTCTTATCTTGAGACTCTTCTCTATGAGAGAG
CATCAATCATTTGGGCCTCCCGAAATCGTCCAAGCTATTTAGGGCCTAGT
GCGCTGCAGATGGGCCATCTATTCGTTCTCCTTGTAGTGAACAGCTTTAC
GGTCTTCTTTCTCATGATTCTCCTCGGTCGAACCATCTGGTCTATGAGCA
TTAATACAACTACTATTGAAGAATGGGAAATTGAGAGACACCAAACACTG
GTTCGTCGGTCCCGTCACTTCGGTGGGTATTTGACCGGGCCAGGTGGCGT
CAGGATTCGGATTAGAAAACAAGAATTCCCATACGACATCGGGATCTGGT
CCAATATCAAGGCGGGAATGGGTGGAACTGCAAATGTTCTTAGCTGGTTT
TGGCCGTTGGCCAGGACACCTGACCGTCGGACGGGATTAGAGTTCGAAGT
GAATGACTTCGAAGATCCTGATGTTACCTGGCCACCCCCCGACCCAGATA
GGATCCCGGTTACAGCTAGAGCAGCTATGGACGATGTTGAGCCCCGGACT
CCGTCCATCTACGGGAGTGCAGGGGGAATGCCCATTGGGGGCCCGAAGGC
TACTCTGAGAGCTAGCCAGGACATCAGACGTCGTAAGCGCTTCCATGATC
GGGCACAGGAAGAACTAAATCAGAGCGCGTCATCTCGGGAATCTTCGCCA
GGTTACAGTTCTGAGCCCGAAGATGGTGAGGAAGGCTGGAAGAACTCCGA
AGGCGAGAGACTTCGTGACTTTGGAGTGGAAGAGGACATTGAGTTTTACG
ACGAAGAGGACATCCCACTGGCCATTTTGATGCAACAGAAAGCACAGCGA
CAATGAATGGCTAGCTCTCCATTCCGGTTGTCGCAACTGGCGATTCCATC
AGTTTGCATCTTAATTAGCTTCCTCGCATACAGCTCGCAGTACTTCTTCC
TGTACTTCGAGCCAGCTCCACTGAGAGACACTGAATTATGGCGCCTTAAC
ATCTTTGCCCTGTGCATCTGGATATGCTATTATCGAACCTGCACTGTAGA
TCCTGGTCACATTCCCAAAGATTGGAAACCATTAGACAGTAAGCAACTGG
AAGCCGACCGTGCTAGTGGTCGTCAACGATGGTGCCGTAAATGTGAGGCA
TACAAGCCGCCAAGAGCCCACCATTGCCGGACGTGCCAAAGATGCATCCC
CAAAATGGACCATCACTGCCCATGGACCTCGAACTGTGTCTCGCACTTCA
CGTTCCCTCACTTCGTGCGTTTTCTATTTTACGCCGTAACGGGAATGTCT
TATCTTGAGACTCTTCTCTATGAGAGAGCATCAATCATTTGGGCCTCCCG
AAATCGTCCAAGCTATTTAGGGCCTAGTGCGCTGCAGATGGGCCATCTAT
TCGTTCTCCTTGTAGTGAACAGCTTTACGGTCTTCTTTCTCATGATTCTC
CTCGGTCGAACCATCTGGTCTATGAGCATTAATACAACTACTATTGAAGA
ATGGGAAATTGAGAGACACCAAACACTGGTTCGTCGGTCCCGTCACTTCG
GTGGGTATTTGACCGGGCCAGGTGGCGTCAGGATTCGGATTAGAAAACAA
GAATTCCCATACGACATCGGGATCTGGTCCAATATCAAGGCGGGAATGGG
TGGAACTGCAAATGTTCTTAGCTGGTTTTGGCCGTTGGCCAGGACACCTG
ACCGTCGGACGGGATTAGAGTTCGAAGTGAATGACTTCGAAGATCCTGAT
GTTACCTGGCCACCCCCCGACCCAGATAGGATCCCGGTTACAGCTAGAGC
AGCTATGGACGATGTTGAGCCCCGGACTCCGTCCATCTACGGGAGTGCAG
GGGGAATGCCCATTGGGGGCCCGAAGGCTACTCTGAGAGCTAGCCAGGAC
ATCAGACGTCGTAAGCGCTTCCATGATCGGGCACAGGAAGAACTAAATCA
GAGCGCGTCATCTCGGGAATCTTCGCCAGGTTACAGTTCTGAGCCCGAAG
ATGGTGAGGAAGGCTGGAAGAACTCCGAAGGCGAGAGACTTCGTGACTTT
GGAGTGGAAGAGGACATTGAGTTTTACGACGAAGAGGACATCCCACTGGC
CATTTTGATGCAACAGAAAGCACAGCGACAATGAATGGCTAGCTCTCCAT
TCCGGTTGTCGCAACTGGCGATTCCATCAGTTTGCATCTTAATTAGCTTC
CTCGCATACAGCTCGCAGTACTTCTTCCTGTACTTCGAGCCAGCTCCACT
GAGAGACACTGAATTATGGCGCCTTAACATCTTTGCCCTGTGCATCTGGA
TATGCTATTATCGAACCTGCACTGTAGATCCTGGTCACATTCCCAAAGAT
TGGAAACCATTAGACAGTAAGCAACTGGAAGCCGACCGTGCTAGTGGTCG
TCAACGATGGTGCCGTAAATGTGAGGCATACAAGCCGCCAAGAGCCCACC
ATTGCCGGACGTGCCAAAGATGCATCCCCAAAATGGACCATCACTGCCCA
TGGACCTCGAACTGTGTCTCGCACTTCACGTTCCCTCACTTCGTGCGTTT
TCTATTTTACGCCGTAACGGGAATGTCTTATCTTGAGACTCTTCTCTATG
AGAGAGCATCAATCATTTGGGCCTCCCGAAATCGTCCAAGCTATTTAGGG
CCTAGTGCGCTGCAGATGGGCCATCTATTCGTTCTCCTTGTAGTGAACAG
CTTTACGGTCTTCTTTCTCATGATTCTCCTCGGTCGAACCATCTGGTCTA
TGAGCATTAATACAACTACTATTGAAGAATGGGAAATTGAGAGACACCAA
ACACTGGTTCGTCGGTCCCGTCACTTCGGTGGGTATTTGACCGGGCCAGG
TGGCGTCAGGATTCGGATTAGAAAACAAGAATTCCCATACGACATCGGGA
TCTGGTCCAATATCAAGGCGGGAATGGGTGGAACTGCAAATGTTCTTAGC
TGGTTTTGGCCGTTGGCCAGGACACCTGACCGTCGGACGGGATTAGAGTT
CGAAGTGAATGACTTCGAAGATCCTGATGTTACCTGGCCACCCCCCGACC
CAGATAGGATCCCGGTTACAGCTAGAGCAGCTATGGACGATGTTGAGCCC
CGGACTCCGTCCATCTACGGGAGTGCAGGGGGAATGCCCATTGGGGGCCC
GAAGGCTACTCTGAGAGCTAGCCAGGACATCAGACGTCGTAAGCGCTTCC
ATGATCGGGCACAGGAAGAACTAAATCAGAGCGCGTCATCTCGGGAATCT
TCGCCAGGTTACAGTTCTGAGCCCGAAGATGGTGAGGAAGGCTGGAAGAA
CTCCGAAGGCGAGAGACTTCGTGACTTTGGAGTGGAAGAGGACATTGAGT
TTTACGACGAAGAGGACATCCCACTGGCCATTTTGATGCAACAGAAAGCA
CAGCGACAATGAATGGCTAGCTCTCCATTCCGGTTGTCGCAACTGGCGAT
TCCATCAGTTTGCATCTTAATTAGCTTCCTCGCATACAGCTCGCAGTACT
TCTTCCTGTACTTCGAGCCAGCTCCACTGAGAGACACTGAATTATGGCGC
CTTAACATCTTTGCCCTGTGCATCTGGATATGCTATTATCGAACCTGCAC
TGTAGATCCTGGTCACATTCCCAAAGATTGGAAACCATTAGACAGTAAGC
AACTGGAAGCCGACCGTGCTAGTGGTCGTCAACGATGGTGCCGTAAATGT
GAGGCATACAAGCCGCCAAGAGCCCACCATTGCCGGACGTGCCAAAGATG
CATCCCCAAAATGGACCATCACTGCCCATGGACCTCGAACTGTGTCTCGC
ACTTCACGTTCCCTCACTTCGTGCGTTTTCTATTTTACGCCGTAACGGGA
ATGTCTTATCTTGAGACTCTTCTCTATGAGAGAGCATCAATCATTTGGGC
CTCCCGAAATCGTCCAAGCTATTTAGGGCCTAGTGCGCTGCAGATGGGCC
ATCTATTCGTTCTCCTTGTAGTGAACAGCTTTACGGTCTTCTTTCTCATG
ATTCTCCTCGGTCGAACCATCTGGTCTATGAGCATTAATACAACTACTAT
TGAAGAATGGGAAATTGAGAGACACCAAACACTGGTTCGTCGGTCCCGTC
ACTTCGGTGGGTATTTGACCGGGCCAGGTGGCGTCAGGATTCGGATTAGA
AAACAAGAATTCCCATACGACATCGGGATCTGGTCCAATATCAAGGCGGG
AATGGGTGGAACTGCAAATGTTCTTAGCTGGTTTTGGCCGTTGGCCAGGA
CACCTGACCGTCGGACGGGATTAGAGTTCGAAGTGAATGACTTCGAAGAT
CCTGATGTTACCTGGCCACCCCCCGACCCAGATAGGATCCCGGTTACAGC
TAGAGCAGCTATGGACGATGTTGAGCCCCGGACTCCGTCCATCTACGGGA
GTGCAGGGGGAATGCCCATTGGGGGCCCGAAGGCTACTCTGAGAGCTAGC
CAGGACATCAGACGTCGTAAGCGCTTCCATGATCGGGCACAGGAAGAACT
AAATCAGAGCGCGTCATCTCGGGAATCTTCGCCAGGTTACAGTTCTGAGC
CCGAAGATGGTGAGGAAGGCTGGAAGAACTCCGAAGGCGAGAGACTTCGT
GACTTTGGAGTGGAAGAGGACATTGAGTTTTACGACGAAGAGGACATCCC
ACTGGCCATTTTGATGCAACAGAAAGCACAGCGACAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005789 | endoplasmic reticulum membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019706 | protein-cysteine S-palmitoyltransferase activity |
| GO:0016409 | palmitoyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004168-T1.utr5p1 | KJC3_004168-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004168-T1.utr3p1 | KJC3_004168-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033682 |
| DBxref | InterPro:IPR001594 |
| DBxref | PFAM:PF01529 |
| Product | Palmitoyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4110654..4112280 + |
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