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KJC3_004170-T1, KJC3_004170-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004170-T1
Unique NameKJC3_004170-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4118942..4119566+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004170-T1 ID=KJC3_004170-T1|Name=KJC3_004170-T1|organism=Aspergillus niger KJC3|type=mRNA|length=625bp|location=Sequence derived from alignment at ch3:4118942..4119566+ (Aspergillus niger KJC3)
ATGCCCTACACCGGCCGTTGTAACTGCACCAGCATCTCCATCACCCTCCC
GGCGCAGCCGGAGAGGAGTGTAGCCTGCCACTGGTAATTTTACACCTCAA
GATCATCCATAGGTAGGGAAAATGGACTAATCGAATGTTGCGCAGCATCA
ACTGCAAGAAAGCTGGAGGAGGCTGTATGTCTCCTTTCCCCGTCCCTACC
CTGCAGTAGCTGCCCAAGACTAAATTAACCAGCCTTCTCAATCAACTACT
TCATCAATCAAGATGACATGACCATCGAAGACCCTAGCCAGGTAATGAAG
ATCTACAGCGATCCCAATACTTCTTCGGGGAACACAATCCAGGTAGGATC
ATCTGCAGTTCGGGGACGATAGTGGGAGTTTTCTGGGCTAATTCGATCAT
TGTAGCGCCATTTCTGCTCTAGTTGTGGAAGGTTAGTTGTTGATCGTGCT
TCGTTCCTGTAATGATTTGCTGATGCAGCTTGGACACAGCCCACTATTCA
CGTTATCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCGGCGCTGTTT
GACAGTGTGTCAAAGCCTGAATCGGTGTTTTTCGGTGACAAGCGGGAGGA
GTGGGTGACCATTAACACGGCATAG
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Coding sequence (CDS) from alignment at ch3:4118942..4119566+

>KJC3_004170-T1 ID=KJC3_004170-T1|Name=KJC3_004170-T1|organism=Aspergillus niger KJC3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch3:4118942..4119566+ (Aspergillus niger KJC3)
ATGCCCTACACCGGCCGTTGTAACTGCACCAGCATCTCCATCACCCTCCC
GGCGCAGCCGGAGAGGAGTGTAGCCTGCCACTGCATCAACTGCAAGAAAG
CTGGAGGAGGCTCCTTCTCAATCAACTACTTCATCAATCAAGATGACATG
ACCATCGAAGACCCTAGCCAGGTAATGAAGATCTACAGCGATCCCAATAC
TTCTTCGGGGAACACAATCCAGCGCCATTTCTGCTCTAGTTGTGGAAGCC
CACTATTCACGTTATCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCG
GCGCTGTTTGACAGTGTGTCAAAGCCTGAATCGGTGTTTTTCGGTGACAA
GCGGGAGGAGTGGGTGACCATTAACACGGCATAGATGCCCTACACCGGCC
GTTGTAACTGCACCAGCATCTCCATCACCCTCCCGGCGCAGCCGGAGAGG
AGTGTAGCCTGCCACTGCATCAACTGCAAGAAAGCTGGAGGAGGCTCCTT
CTCAATCAACTACTTCATCAATCAAGATGACATGACCATCGAAGACCCTA
GCCAGGTAATGAAGATCTACAGCGATCCCAATACTTCTTCGGGGAACACA
ATCCAGCGCCATTTCTGCTCTAGTTGTGGAAGCCCACTATTCACGTTATC
GCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCGGCGCTGTTTGACAGTG
TGTCAAAGCCTGAATCGGTGTTTTTCGGTGACAAGCGGGAGGAGTGGGTG
ACCATTAACACGGCATAGATGCCCTACACCGGCCGTTGTAACTGCACCAG
CATCTCCATCACCCTCCCGGCGCAGCCGGAGAGGAGTGTAGCCTGCCACT
GCATCAACTGCAAGAAAGCTGGAGGAGGCTCCTTCTCAATCAACTACTTC
ATCAATCAAGATGACATGACCATCGAAGACCCTAGCCAGGTAATGAAGAT
CTACAGCGATCCCAATACTTCTTCGGGGAACACAATCCAGCGCCATTTCT
GCTCTAGTTGTGGAAGCCCACTATTCACGTTATCGCCCAAGGTGCCAGGA
AAGGCGTATTTGAAGGCGGCGCTGTTTGACAGTGTGTCAAAGCCTGAATC
GGTGTTTTTCGGTGACAAGCGGGAGGAGTGGGTGACCATTAACACGGCAT
AGATGCCCTACACCGGCCGTTGTAACTGCACCAGCATCTCCATCACCCTC
CCGGCGCAGCCGGAGAGGAGTGTAGCCTGCCACTGCATCAACTGCAAGAA
AGCTGGAGGAGGCTCCTTCTCAATCAACTACTTCATCAATCAAGATGACA
TGACCATCGAAGACCCTAGCCAGGTAATGAAGATCTACAGCGATCCCAAT
ACTTCTTCGGGGAACACAATCCAGCGCCATTTCTGCTCTAGTTGTGGAAG
CCCACTATTCACGTTATCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGG
CGGCGCTGTTTGACAGTGTGTCAAAGCCTGAATCGGTGTTTTTCGGTGAC
AAGCGGGAGGAGTGGGTGACCATTAACACGGCATAGATGCCCTACACCGG
CCGTTGTAACTGCACCAGCATCTCCATCACCCTCCCGGCGCAGCCGGAGA
GGAGTGTAGCCTGCCACTGCATCAACTGCAAGAAAGCTGGAGGAGGCTCC
TTCTCAATCAACTACTTCATCAATCAAGATGACATGACCATCGAAGACCC
TAGCCAGGTAATGAAGATCTACAGCGATCCCAATACTTCTTCGGGGAACA
CAATCCAGCGCCATTTCTGCTCTAGTTGTGGAAGCCCACTATTCACGTTA
TCGCCCAAGGTGCCAGGAAAGGCGTATTTGAAGGCGGCGCTGTTTGACAG
TGTGTCAAAGCCTGAATCGGTGTTTTTCGGTGACAAGCGGGAGGAGTGGG
TGACCATTAACACGGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004170KJC3_004170Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004170-T1KJC3_004170-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004170-T1.exon1KJC3_004170-T1.exon1Aspergillus niger KJC3exon
KJC3_004170-T1.exon2KJC3_004170-T1.exon2Aspergillus niger KJC3exon
KJC3_004170-T1.exon3KJC3_004170-T1.exon3Aspergillus niger KJC3exon
KJC3_004170-T1.exon4KJC3_004170-T1.exon4Aspergillus niger KJC3exon
KJC3_004170-T1.exon5KJC3_004170-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004170-T1.cdsKJC3_004170-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4118942..4119566 +
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