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KJC3_004171-T1, KJC3_004171-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004171-T1
Unique NameKJC3_004171-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4120056..4121035+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004171-T1 ID=KJC3_004171-T1|Name=KJC3_004171-T1|organism=Aspergillus niger KJC3|type=mRNA|length=980bp|location=Sequence derived from alignment at ch3:4120056..4121035+ (Aspergillus niger KJC3)
ATGGTTGATCGCCAGGACAATCACTCTGCACCGGACAAGGCGATCGCTGC
AGCGACCGGTCGCGAGGATATTCTCACCCCACCAGCTGCCTGCCACACAA
CTCAACGACCTCATCGCGATGATGACGACGCCAGAAGCACAGATAACGAC
CTGGATGCCCTCGAACTCCGCAATATAGCCACTCAAGATGACGACGAGGC
CGGCTTCTCAACCGAATCGATCTCCTCGGGCGAATATCGTATCCGCACAC
ATCGGACCGTTTCCCGCACCACTCATTCCAACCGGGAGCACACAAGCAAG
GGGCTGGCGGGATATATTCGTCGCTTTTGGACACGAAATGTGGTGTTGAC
AGTGCCGCAGAAGAGTAATCGGGACCATTTCGGTGAGTGGGCACCTCGTT
TTCTGATATATACTTCGCATATTACTCCATCCGATGCATACATTCAATAC
TATTGATGCCACTAAAATGGCGCAATCGCACGTGGCTATGGCGCCAGATA
ATCACGAGCTCATCCATTCACCAACAATAACGCAGAAGGAATGCAAGGCT
GCTGCTGACATCTCACACTATCCATTTAGCTTTAGAGCGAACTTTCTTAG
CTTACATTCGTACTTCGGTCATGGTCGCCATGCAAGGTGTATTGATCGCC
CAATTATTTCGACTCCAGCATTTAGCTTCGCCGGATACAGCACTGGGCTT
CTATGAAGTGGGGATTCCCCTGGCGGTTAGCTGCTATGGCGTGGCAATTT
TTATAGCTGCCATGGGCGCGTATCGCTTCTGGAAGCAGCAGAATGTGGTG
GCTTTGGGGACAGTATATGCGGGGGGGTGGGAATTGAACTGTATCGGGGT
GTTGATTGGGTTGGTGAGTTTGACTCGCTGCGTTTGAGTGGGATGGTGTT
ACTAACAACAGTAGATTATTTTGACGACGTTTATACTATCCCTGGTTATT
ACCGTTGAGTTAAAACACGAGGATAGTTAG
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Coding sequence (CDS) from alignment at ch3:4120056..4121035+

>KJC3_004171-T1 ID=KJC3_004171-T1|Name=KJC3_004171-T1|organism=Aspergillus niger KJC3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch3:4120056..4121035+ (Aspergillus niger KJC3)
ATGGTTGATCGCCAGGACAATCACTCTGCACCGGACAAGGCGATCGCTGC
AGCGACCGGTCGCGAGGATATTCTCACCCCACCAGCTGCCTGCCACACAA
CTCAACGACCTCATCGCGATGATGACGACGCCAGAAGCACAGATAACGAC
CTGGATGCCCTCGAACTCCGCAATATAGCCACTCAAGATGACGACGAGGC
CGGCTTCTCAACCGAATCGATCTCCTCGGGCGAATATCGTATCCGCACAC
ATCGGACCGTTTCCCGCACCACTCATTCCAACCGGGAGCACACAAGCAAG
GGGCTGGCGGGATATATTCGTCGCTTTTGGACACGAAATGTGGTGTTGAC
AGTGCCGCAGAAGAGTAATCGGGACCATTTCGCTTTAGAGCGAACTTTCT
TAGCTTACATTCGTACTTCGGTCATGGTCGCCATGCAAGGTGTATTGATC
GCCCAATTATTTCGACTCCAGCATTTAGCTTCGCCGGATACAGCACTGGG
CTTCTATGAAGTGGGGATTCCCCTGGCGGTTAGCTGCTATGGCGTGGCAA
TTTTTATAGCTGCCATGGGCGCGTATCGCTTCTGGAAGCAGCAGAATGTG
GTGGCTTTGGGGACAGTATATGCGGGGGGGTGGGAATTGAACTGTATCGG
GGTGTTGATTGGGTTGATTATTTTGACGACGTTTATACTATCCCTGGTTA
TTACCGTTGAGTTAAAACACGAGGATAGTTAGATGGTTGATCGCCAGGAC
AATCACTCTGCACCGGACAAGGCGATCGCTGCAGCGACCGGTCGCGAGGA
TATTCTCACCCCACCAGCTGCCTGCCACACAACTCAACGACCTCATCGCG
ATGATGACGACGCCAGAAGCACAGATAACGACCTGGATGCCCTCGAACTC
CGCAATATAGCCACTCAAGATGACGACGAGGCCGGCTTCTCAACCGAATC
GATCTCCTCGGGCGAATATCGTATCCGCACACATCGGACCGTTTCCCGCA
CCACTCATTCCAACCGGGAGCACACAAGCAAGGGGCTGGCGGGATATATT
CGTCGCTTTTGGACACGAAATGTGGTGTTGACAGTGCCGCAGAAGAGTAA
TCGGGACCATTTCGCTTTAGAGCGAACTTTCTTAGCTTACATTCGTACTT
CGGTCATGGTCGCCATGCAAGGTGTATTGATCGCCCAATTATTTCGACTC
CAGCATTTAGCTTCGCCGGATACAGCACTGGGCTTCTATGAAGTGGGGAT
TCCCCTGGCGGTTAGCTGCTATGGCGTGGCAATTTTTATAGCTGCCATGG
GCGCGTATCGCTTCTGGAAGCAGCAGAATGTGGTGGCTTTGGGGACAGTA
TATGCGGGGGGGTGGGAATTGAACTGTATCGGGGTGTTGATTGGGTTGAT
TATTTTGACGACGTTTATACTATCCCTGGTTATTACCGTTGAGTTAAAAC
ACGAGGATAGTTAGATGGTTGATCGCCAGGACAATCACTCTGCACCGGAC
AAGGCGATCGCTGCAGCGACCGGTCGCGAGGATATTCTCACCCCACCAGC
TGCCTGCCACACAACTCAACGACCTCATCGCGATGATGACGACGCCAGAA
GCACAGATAACGACCTGGATGCCCTCGAACTCCGCAATATAGCCACTCAA
GATGACGACGAGGCCGGCTTCTCAACCGAATCGATCTCCTCGGGCGAATA
TCGTATCCGCACACATCGGACCGTTTCCCGCACCACTCATTCCAACCGGG
AGCACACAAGCAAGGGGCTGGCGGGATATATTCGTCGCTTTTGGACACGA
AATGTGGTGTTGACAGTGCCGCAGAAGAGTAATCGGGACCATTTCGCTTT
AGAGCGAACTTTCTTAGCTTACATTCGTACTTCGGTCATGGTCGCCATGC
AAGGTGTATTGATCGCCCAATTATTTCGACTCCAGCATTTAGCTTCGCCG
GATACAGCACTGGGCTTCTATGAAGTGGGGATTCCCCTGGCGGTTAGCTG
CTATGGCGTGGCAATTTTTATAGCTGCCATGGGCGCGTATCGCTTCTGGA
AGCAGCAGAATGTGGTGGCTTTGGGGACAGTATATGCGGGGGGGTGGGAA
TTGAACTGTATCGGGGTGTTGATTGGGTTGATTATTTTGACGACGTTTAT
ACTATCCCTGGTTATTACCGTTGAGTTAAAACACGAGGATAGTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004171KJC3_004171Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004171-T1.exon1KJC3_004171-T1.exon1Aspergillus niger KJC3exon
KJC3_004171-T1.exon2KJC3_004171-T1.exon2Aspergillus niger KJC3exon
KJC3_004171-T1.exon3KJC3_004171-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004171-T1.cdsKJC3_004171-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004171-T1KJC3_004171-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003807
DBxrefPFAM:PF02656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4120056..4121035 +
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