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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4152550..4155065+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004184-T1 ID=KJC3_004184-T1|Name=KJC3_004184-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2516bp|location=Sequence derived from alignment at ch3:4152550..4155065+ (Aspergillus niger KJC3)
ATGCCATCCACCCTTTGCAACAGATGCAAAGTCCTATACTTTAGCGCCGA
GTCCCTATCTCGATACGGCTTCACAGAAGTGGAAACAGAAACCGGAAAAC
CCCACCTGCAATTCCCAGCTGGGCAACATTCCATCCCTATCGAATTTGAC
TGTCGTGATGACCTCCCCGAATTACCGGCTCTTAGGGCGTCAGGCGAGGC
AGGATGCTTGTTCTGCCCAGCGCTCCGAAATTCGCTGCTAAAGGGCATTA
GCGAATGTCGTCTTCGCAGTTGGGTCTTGGGGAATCATGACCATGGACAA
TGGACAGTCAAGGTGGTCAAGGTTTCGCTGATGGCGGAATTCAGAGCCTC
GGACGACGAGAGAAGTAAATTCGCAGCAATCATGATGGGATGGGATGTTC
TTAGGCCAGGACAGGATCGGTATGAGGGCGATTTTACTGGGCCCGATGGT
TTGATTTATTTCAAGCTACGTGCACACTATGGTGGGTTATCCGTTTTCTC
TCTTATGTTAAGATTGGAAGTTGCTCCTAACTGGGATGACAATGCGTGCT
AAACAATATTAGGTGACCCCCTTGCACGCTATCTAGGCATCGCATATCCC
CATCCTGATCAAGATAGGCTCTCCACTGAAAACACAAAGACGATTCGTCA
CCACTTAATTGAATGCGACAAGAACCATAATCATGCCTCCAACATTGTCC
GCCCTGGGGATTCAATATCCGACAGGTTGCCTCTACGGCTTATTGAGATT
ACTGACAGCCAGGAAGGCAAGAAGCTGCGCTTGATAGAGACAAAAGAAAT
CAACGGTCATGAATCAACCTGTCAAGACGCCTCCAAATGCCCGAAATACG
CCACACTCAGCTACCGCTGGGGCTCCGACGAGTTCCTTACCACAACCCCC
AGCAACCTTCAAGCGCATCACCGGGATATCCCACTATCACCATTCTCGGC
AGATGACCCCACGACGACCCTACCACCGGGTTTCAGAGACGTCGTCGACG
TATGCTGCGCGTTGGGAATTCCGTATCTGTGGATCGATAGTCTCTGCATT
GTCCAGAAAGAAACGAGAACCACAGACAAGCCTCTTCTTGAGATCCAACA
GGAGCAGTCCCGACGCGATTGGGCCTCAGAGTCGACCAAAATGCACAGCA
TCTACATGTCATCATACCTGACAATTTACTTGACTGCCACAGATACGCCT
CTTCAGAAAGTCTTTGATCGACCAGTATGCAGCTCTGAGTCTCTGGTCCC
CATCACATACTCCATCGAAAATCGCCCTGAAGTCCACGGCTCATACTTCA
TCGAGCCCTCGCCTTACACAGGCGAACTGGATCACCTTTTCTGGAATCCA
TACCTAGCCGCTGAGGATGAGCTAGACTCATCAGTATGGAACACCCGCGG
TTGGACCCTACAGGAACGACTCCTATCCCCACGAAAGCTCTACCTTGGGG
TAACCGATATGCTCGGCCTAGGCTTATTGACCTGCCCCTCACCAAAAGAT
TACGGGCGCGATGTCGAGCTAATCAAACGGCCCCGACGTCACAAGTCACT
GGACAAACTGGAGATCGGAGGAACGTCATCTGCGACCGGGGAACAAGCTC
CCGATAACACAAAACTATATCGCGCTTGGTATAAAATCGTGGAAGACTAT
ACCTGTCGTGATCTGACGGTCCCAAGCGACAAGTTACCTGCTGTTGCCGG
CATCGCACGCACACACGCCTTAGCCCTGAATGACGAATACCTCGTTGGAA
TATGGGTTCATGATTTGGCCACGGGACTTCTTTGGGGCACCCGTAATGCA
ATGAGACCTGGCATGGATCGATACTTTGGAGAACGAGAACGACAGCCCAT
GATCCCGACAGAACATTATCGGGCGCCGACTTGGTCATGGTGTGCCAACG
ATGGGGCGGTTGAATTTCTTGTACGTCATCTCCATAATCCGAAATCGGAG
ATCGAGGTTCTCGGTCACGATGTGATCCCGCAGTACATGGGAGACAGCTA
TGGACAACTGGCAGTCGACCAAGGAGATCGGGGATATGTGAAGCTCAGGG
CGAAGATTAGAGTAGCCCGGATGGAAGCCAGGTTCCAGCCGATACCAGAC
ATCATGCTGCGGAACTTCCCTGCACTGGCAAACCGAGGTCCCGAGGCTGA
GAATAAGGAATTTCAGTTACGATATGTCCATGTGACTGACGATGCTGGAG
AACGCGGGAGTGAGACTATATTTCTGGATCATGCTGGATGCTATCCTAAC
GAAGAAGAAGTCCACTTGATGATTGTATCCAGGGGTGATCAGCGGGTGTG
GTCGGAGCCTGGTAAGTACGAAGTTGGGGTTCGATCTGCCGGGTTGGTGT
TGCTGAAGTGTCCGAATCAGACGAGATTGCAGTTTAAGCGGATTGGCTTC
TTTACGCATTTCTGGGATTCTGGCCTTACCCCAGTTTTCGATGGGTGTGA
GCCGCAGACTGTTTATCTGGTGTGATCATGGCAGCCCTTGAGGTATTTTA
TAGATGAAACAGTAAG back to topCoding sequence (CDS) from alignment at ch3:4152550..4155065+ >KJC3_004184-T1 ID=KJC3_004184-T1|Name=KJC3_004184-T1|organism=Aspergillus niger KJC3|type=CDS|length=4788bp|location=Sequence derived from alignment at ch3:4152550..4155065+ (Aspergillus niger KJC3)
ATGCCATCCACCCTTTGCAACAGATGCAAAGTCCTATACTTTAGCGCCGA
GTCCCTATCTCGATACGGCTTCACAGAAGTGGAAACAGAAACCGGAAAAC
CCCACCTGCAATTCCCAGCTGGGCAACATTCCATCCCTATCGAATTTGAC
TGTCGTGATGACCTCCCCGAATTACCGGCTCTTAGGGCGTCAGGCGAGGC
AGGATGCTTGTTCTGCCCAGCGCTCCGAAATTCGCTGCTAAAGGGCATTA
GCGAATGTCGTCTTCGCAGTTGGGTCTTGGGGAATCATGACCATGGACAA
TGGACAGTCAAGGTGGTCAAGGTTTCGCTGATGGCGGAATTCAGAGCCTC
GGACGACGAGAGAAGTAAATTCGCAGCAATCATGATGGGATGGGATGTTC
TTAGGCCAGGACAGGATCGGTATGAGGGCGATTTTACTGGGCCCGATGGT
TTGATTTATTTCAAGCTACGTGCACACTATGGTGACCCCCTTGCACGCTA
TCTAGGCATCGCATATCCCCATCCTGATCAAGATAGGCTCTCCACTGAAA
ACACAAAGACGATTCGTCACCACTTAATTGAATGCGACAAGAACCATAAT
CATGCCTCCAACATTGTCCGCCCTGGGGATTCAATATCCGACAGGTTGCC
TCTACGGCTTATTGAGATTACTGACAGCCAGGAAGGCAAGAAGCTGCGCT
TGATAGAGACAAAAGAAATCAACGGTCATGAATCAACCTGTCAAGACGCC
TCCAAATGCCCGAAATACGCCACACTCAGCTACCGCTGGGGCTCCGACGA
GTTCCTTACCACAACCCCCAGCAACCTTCAAGCGCATCACCGGGATATCC
CACTATCACCATTCTCGGCAGATGACCCCACGACGACCCTACCACCGGGT
TTCAGAGACGTCGTCGACGTATGCTGCGCGTTGGGAATTCCGTATCTGTG
GATCGATAGTCTCTGCATTGTCCAGAAAGAAACGAGAACCACAGACAAGC
CTCTTCTTGAGATCCAACAGGAGCAGTCCCGACGCGATTGGGCCTCAGAG
TCGACCAAAATGCACAGCATCTACATGTCATCATACCTGACAATTTACTT
GACTGCCACAGATACGCCTCTTCAGAAAGTCTTTGATCGACCAGTATGCA
GCTCTGAGTCTCTGGTCCCCATCACATACTCCATCGAAAATCGCCCTGAA
GTCCACGGCTCATACTTCATCGAGCCCTCGCCTTACACAGGCGAACTGGA
TCACCTTTTCTGGAATCCATACCTAGCCGCTGAGGATGAGCTAGACTCAT
CAGTATGGAACACCCGCGGTTGGACCCTACAGGAACGACTCCTATCCCCA
CGAAAGCTCTACCTTGGGGTAACCGATATGCTCGGCCTAGGCTTATTGAC
CTGCCCCTCACCAAAAGATTACGGGCGCGATGTCGAGCTAATCAAACGGC
CCCGACGTCACAAGTCACTGGACAAACTGGAGATCGGAGGAACGTCATCT
GCGACCGGGGAACAAGCTCCCGATAACACAAAACTATATCGCGCTTGGTA
TAAAATCGTGGAAGACTATACCTGTCGTGATCTGACGGTCCCAAGCGACA
AGTTACCTGCTGTTGCCGGCATCGCACGCACACACGCCTTAGCCCTGAAT
GACGAATACCTCGTTGGAATATGGGTTCATGATTTGGCCACGGGACTTCT
TTGGGGCACCCGTAATGCAATGAGACCTGGCATGGATCGATACTTTGGAG
AACGAGAACGACAGCCCATGATCCCGACAGAACATTATCGGGCGCCGACT
TGGTCATGGTGTGCCAACGATGGGGCGGTTGAATTTCTTGTACGTCATCT
CCATAATCCGAAATCGGAGATCGAGGTTCTCGGTCACGATGTGATCCCGC
AGTACATGGGAGACAGCTATGGACAACTGGCAGTCGACCAAGGAGATCGG
GGATATGTGAAGCTCAGGGCGAAGATTAGAGTAGCCCGGATGGAAGCCAG
GTTCCAGCCGATACCAGACATCATGCTGCGGAACTTCCCTGCACTGGCAA
ACCGAGGTCCCGAGGCTGAGAATAAGGAATTTCAGTTACGATATGTCCAT
GTGACTGACGATGCTGGAGAACGCGGGAGTGAGACTATATTTCTGGATCA
TGCTGGATGCTATCCTAACGAAGAAGAAGTCCACTTGATGATTGTATCCA
GGGGTGATCAGCGGGTGTGGTCGGAGCCTGGTAAGTACGAAGTTGGGGTT
CGATCTGCCGGGTTGGTGTTGCTGAAGTGTCCGAATCAGACGAGATTGCA
GTTTAAGCGGATTGGCTTCTTTACGCATTTCTGGGATTCTGGCCTTACCC
CAGTTTTCGATGGGTGTGAGCCGCAGACTGTTTATCTGGTGTGAATGCCA
TCCACCCTTTGCAACAGATGCAAAGTCCTATACTTTAGCGCCGAGTCCCT
ATCTCGATACGGCTTCACAGAAGTGGAAACAGAAACCGGAAAACCCCACC
TGCAATTCCCAGCTGGGCAACATTCCATCCCTATCGAATTTGACTGTCGT
GATGACCTCCCCGAATTACCGGCTCTTAGGGCGTCAGGCGAGGCAGGATG
CTTGTTCTGCCCAGCGCTCCGAAATTCGCTGCTAAAGGGCATTAGCGAAT
GTCGTCTTCGCAGTTGGGTCTTGGGGAATCATGACCATGGACAATGGACA
GTCAAGGTGGTCAAGGTTTCGCTGATGGCGGAATTCAGAGCCTCGGACGA
CGAGAGAAGTAAATTCGCAGCAATCATGATGGGATGGGATGTTCTTAGGC
CAGGACAGGATCGGTATGAGGGCGATTTTACTGGGCCCGATGGTTTGATT
TATTTCAAGCTACGTGCACACTATGGTGACCCCCTTGCACGCTATCTAGG
CATCGCATATCCCCATCCTGATCAAGATAGGCTCTCCACTGAAAACACAA
AGACGATTCGTCACCACTTAATTGAATGCGACAAGAACCATAATCATGCC
TCCAACATTGTCCGCCCTGGGGATTCAATATCCGACAGGTTGCCTCTACG
GCTTATTGAGATTACTGACAGCCAGGAAGGCAAGAAGCTGCGCTTGATAG
AGACAAAAGAAATCAACGGTCATGAATCAACCTGTCAAGACGCCTCCAAA
TGCCCGAAATACGCCACACTCAGCTACCGCTGGGGCTCCGACGAGTTCCT
TACCACAACCCCCAGCAACCTTCAAGCGCATCACCGGGATATCCCACTAT
CACCATTCTCGGCAGATGACCCCACGACGACCCTACCACCGGGTTTCAGA
GACGTCGTCGACGTATGCTGCGCGTTGGGAATTCCGTATCTGTGGATCGA
TAGTCTCTGCATTGTCCAGAAAGAAACGAGAACCACAGACAAGCCTCTTC
TTGAGATCCAACAGGAGCAGTCCCGACGCGATTGGGCCTCAGAGTCGACC
AAAATGCACAGCATCTACATGTCATCATACCTGACAATTTACTTGACTGC
CACAGATACGCCTCTTCAGAAAGTCTTTGATCGACCAGTATGCAGCTCTG
AGTCTCTGGTCCCCATCACATACTCCATCGAAAATCGCCCTGAAGTCCAC
GGCTCATACTTCATCGAGCCCTCGCCTTACACAGGCGAACTGGATCACCT
TTTCTGGAATCCATACCTAGCCGCTGAGGATGAGCTAGACTCATCAGTAT
GGAACACCCGCGGTTGGACCCTACAGGAACGACTCCTATCCCCACGAAAG
CTCTACCTTGGGGTAACCGATATGCTCGGCCTAGGCTTATTGACCTGCCC
CTCACCAAAAGATTACGGGCGCGATGTCGAGCTAATCAAACGGCCCCGAC
GTCACAAGTCACTGGACAAACTGGAGATCGGAGGAACGTCATCTGCGACC
GGGGAACAAGCTCCCGATAACACAAAACTATATCGCGCTTGGTATAAAAT
CGTGGAAGACTATACCTGTCGTGATCTGACGGTCCCAAGCGACAAGTTAC
CTGCTGTTGCCGGCATCGCACGCACACACGCCTTAGCCCTGAATGACGAA
TACCTCGTTGGAATATGGGTTCATGATTTGGCCACGGGACTTCTTTGGGG
CACCCGTAATGCAATGAGACCTGGCATGGATCGATACTTTGGAGAACGAG
AACGACAGCCCATGATCCCGACAGAACATTATCGGGCGCCGACTTGGTCA
TGGTGTGCCAACGATGGGGCGGTTGAATTTCTTGTACGTCATCTCCATAA
TCCGAAATCGGAGATCGAGGTTCTCGGTCACGATGTGATCCCGCAGTACA
TGGGAGACAGCTATGGACAACTGGCAGTCGACCAAGGAGATCGGGGATAT
GTGAAGCTCAGGGCGAAGATTAGAGTAGCCCGGATGGAAGCCAGGTTCCA
GCCGATACCAGACATCATGCTGCGGAACTTCCCTGCACTGGCAAACCGAG
GTCCCGAGGCTGAGAATAAGGAATTTCAGTTACGATATGTCCATGTGACT
GACGATGCTGGAGAACGCGGGAGTGAGACTATATTTCTGGATCATGCTGG
ATGCTATCCTAACGAAGAAGAAGTCCACTTGATGATTGTATCCAGGGGTG
ATCAGCGGGTGTGGTCGGAGCCTGGTAAGTACGAAGTTGGGGTTCGATCT
GCCGGGTTGGTGTTGCTGAAGTGTCCGAATCAGACGAGATTGCAGTTTAA
GCGGATTGGCTTCTTTACGCATTTCTGGGATTCTGGCCTTACCCCAGTTT
TCGATGGGTGTGAGCCGCAGACTGTTTATCTGGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004184-T1.utr3p1 | KJC3_004184-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4152550..4155065 + |
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