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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4173182..4174222- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004193-T1 ID=KJC3_004193-T1|Name=KJC3_004193-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1041bp|location=Sequence derived from alignment at ch3:4173182..4174222- (Aspergillus niger KJC3)
ATGGCTACTCAAGACAAATATTGCTTCGAGAGGGATAAGAAAGAATCGGA
GAGGTATGATCTTAGATATTTCAATGCTTATGAACTATCTCGTACAGTTT
TCTAATGCCAGTCTAGACTGGACTTACAGCATCGCGTGCTAGTCAAAACA
AGCGGAGATACCCTCATTCATCCTTCAATCCCTCTCAACGAAATTCGATC
TGTTGCAGACATAGCTACTGGAACTGGGTGAGTCTGTCCCCTCCGTGCAA
GACCGGGTCATTGGAGCTGATGGGCAATTTTTCTGTCAGAATTTGGCTGC
AAGATGTGTCGAAATTTCTGGACACACCACAAATTGAACGCTACTATCAT
GGCTTCGATATTTCAGCCGAGCAATTTCCTGAGAATCCAGGAGCGATCCA
GTTTTCTGTTCAAGATCTGACGATTCCATTTCCTCGAGAACATCGGGAAC
GTTATGACTTGGTACACGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCT
GACTACAAAGCTGCGATCGCAAATATCTATGATATATTGAGTATGGCAAA
CCCTTTCCTGTGCACATCGCATTGCTGCCTCACGAGTTGGTACTAATATG
ACCGCAGAGCCCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAAC
CTACCTCACGGAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTG
ACTATGGACTGGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTT
TATGAAGAGAGCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTA
TAACTCTCACCAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCA
CTGCGATAATTAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAG
GTCGATACCGCGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCA
GCATCGGCGTCTGTGCGCACAGGGAAATTCCCCGCCACTCAAGTTGATGA
GGGTTGTGGGTCGGAAGCCTTTACTTAGTTCATTGCTGTAG back to topCoding sequence (CDS) from alignment at ch3:4173182..4174222- >KJC3_004193-T1 ID=KJC3_004193-T1|Name=KJC3_004193-T1|organism=Aspergillus niger KJC3|type=CDS|length=3396bp|location=Sequence derived from alignment at ch3:4173182..4174222- (Aspergillus niger KJC3)
AGCCCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAACCTACCTC
ACGGAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTGACTATGG
ACTGGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTTTATGAAG
AGAGCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTATAACTCT
CACCAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCACTGCGAT
AATTAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAGGTCGATA
CCGCGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCAGCATCGG
CGTCTGTGCGCACAGGGAAATTCCCCGCCACTCAAGTTGATGAGGGTTGT
GGGTCGGAAGCCTTTACTTAGTTCATTGCTGTAGAATTTGGCTGCAAGAT
GTGTCGAAATTTCTGGACACACCACAAATTGAACGCTACTATCATGGCTT
CGATATTTCAGCCGAGCAATTTCCTGAGAATCCAGGAGCGATCCAGTTTT
CTGTTCAAGATCTGACGATTCCATTTCCTCGAGAACATCGGGAACGTTAT
GACTTGGTACACGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCTGACTA
CAAAGCTGCGATCGCAAATATCTATGATATATTGAACTGGACTTACAGCA
TCGCGTGCTAGTCAAAACAAGCGGAGATACCCTCATTCATCCTTCAATCC
CTCTCAACGAAATTCGATCTGTTGCAGACATAGCTACTGGAACTGGATGG
CTACTCAAGACAAATATTGCTTCGAGAGGGATAAGAAAGAATCGGAGAGA
GCCCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAACCTACCTCA
CGGAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTGACTATGGA
CTGGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTTTATGAAGA
GAGCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTATAACTCTC
ACCAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCACTGCGATA
ATTAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAGGTCGATAC
CGCGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCAGCATCGGC
GTCTGTGCGCACAGGGAAATTCCCCGCCACTCAAGTTGATGAGGGTTGTG
GGTCGGAAGCCTTTACTTAGTTCATTGCTGTAGAATTTGGCTGCAAGATG
TGTCGAAATTTCTGGACACACCACAAATTGAACGCTACTATCATGGCTTC
GATATTTCAGCCGAGCAATTTCCTGAGAATCCAGGAGCGATCCAGTTTTC
TGTTCAAGATCTGACGATTCCATTTCCTCGAGAACATCGGGAACGTTATG
ACTTGGTACACGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCTGACTAC
AAAGCTGCGATCGCAAATATCTATGATATATTGAACTGGACTTACAGCAT
CGCGTGCTAGTCAAAACAAGCGGAGATACCCTCATTCATCCTTCAATCCC
TCTCAACGAAATTCGATCTGTTGCAGACATAGCTACTGGAACTGGATGGC
TACTCAAGACAAATATTGCTTCGAGAGGGATAAGAAAGAATCGGAGAGAG
CCCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAACCTACCTCAC
GGAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTGACTATGGAC
TGGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTTTATGAAGAG
AGCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTATAACTCTCA
CCAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCACTGCGATAA
TTAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAGGTCGATACC
GCGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCAGCATCGGCG
TCTGTGCGCACAGGGAAATTCCCCGCCACTCAAGTTGATGAGGGTTGTGG
GTCGGAAGCCTTTACTTAGTTCATTGCTGTAGAATTTGGCTGCAAGATGT
GTCGAAATTTCTGGACACACCACAAATTGAACGCTACTATCATGGCTTCG
ATATTTCAGCCGAGCAATTTCCTGAGAATCCAGGAGCGATCCAGTTTTCT
GTTCAAGATCTGACGATTCCATTTCCTCGAGAACATCGGGAACGTTATGA
CTTGGTACACGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCTGACTACA
AAGCTGCGATCGCAAATATCTATGATATATTGAACTGGACTTACAGCATC
GCGTGCTAGTCAAAACAAGCGGAGATACCCTCATTCATCCTTCAATCCCT
CTCAACGAAATTCGATCTGTTGCAGACATAGCTACTGGAACTGGATGGCT
ACTCAAGACAAATATTGCTTCGAGAGGGATAAGAAAGAATCGGAGAGAGC
CCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAACCTACCTCACG
GAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTGACTATGGACT
GGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTTTATGAAGAGA
GCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTATAACTCTCAC
CAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCACTGCGATAAT
TAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAGGTCGATACCG
CGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCAGCATCGGCGT
CTGTGCGCACAGGGAAATTCCCCGCCACTCAAGTTGATGAGGGTTGTGGG
TCGGAAGCCTTTACTTAGTTCATTGCTGTAGAATTTGGCTGCAAGATGTG
TCGAAATTTCTGGACACACCACAAATTGAACGCTACTATCATGGCTTCGA
TATTTCAGCCGAGCAATTTCCTGAGAATCCAGGAGCGATCCAGTTTTCTG
TTCAAGATCTGACGATTCCATTTCCTCGAGAACATCGGGAACGTTATGAC
TTGGTACACGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCTGACTACAA
AGCTGCGATCGCAAATATCTATGATATATTGAACTGGACTTACAGCATCG
CGTGCTAGTCAAAACAAGCGGAGATACCCTCATTCATCCTTCAATCCCTC
TCAACGAAATTCGATCTGTTGCAGACATAGCTACTGGAACTGGATGGCTA
CTCAAGACAAATATTGCTTCGAGAGGGATAAGAAAGAATCGGAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4173182..4174222 - |
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