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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4175699..4177550- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004194-T1 ID=KJC3_004194-T1|Name=KJC3_004194-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1852bp|location=Sequence derived from alignment at ch3:4175699..4177550- (Aspergillus niger KJC3)
ATGGTGGTGTGCTATGGAGAGATTTACCACGTCTACGATATGATTCCGCA
TAAAGGTATGTGCCAAAGATCAAGCCTTCTTTGCTCCATAGAGTATATCG
CTCAATGACGCTGACATTTTGCGATTGCATCTTTGCATGATTGGAGGCCT
GGATGAAAACTTGAACTTTGAAATAGGGGCATCTACTGGCGACCAGACAA
CGTGGGTGTTAATTGAGCGGTGGCTGAATCGGTGTCTTCAAGGACATCCG
ACTTGCGATTACCAACATGATGAGGCAAAGTTTATCCCAAGCCGGCTATT
AGAGCTACATACAATCAGTTCTGAGAAGAAAATGTTCCGTGTTGTTGAGA
GGCAACAGATCCAGCCCGAGGAGCGCTACATAACTCTAAGCCACTGCTGG
GGCTCAACACCATCTAACCCCAATTTGATCTTGTTGAAAGACACATTCCA
GAGTCTCAGAGAGTACCAGCAACTCTCTGTCCTTCCAAAAACATTCAGAG
ACGCTTTCACCATTATCGAACGGTTGAGAATCCGTTACATATGGATTGAC
CGTCTCTGTATACTCCAGGATTCTGCTGAGGACTGGCAAAGAGAATCCGC
AGCTATGGGGCAAGTTTACAGGAATGCTTTTCTGGGGATATCTGCATTAA
GCTCTAGCAACGATGCTGGTGGCTGTTTTTTCTCGCGCGACTCTGCAAAA
GTTGCCCCTAGCATCGTCAACATACGTGTCGATGATTCGAGTGATCCTAA
GTCATTCAGGTCTCGCGGAGAAAAAGGATGGCCTTTGCCACGAAAATTTG
GGCAAGAACCTCTGCCAAAGCGAGGTTGGATTTTGCAGGAACGCCTTTTA
TGCCCACGTGTTCTGCACTTCGGTCGGGAACAAGTTTTCTGGGAATGCAG
GGAATGTACCTGCTGTGAAACACAACCGAACAATGCTTACGAGCGTGATG
ATCGTCCTCGCAGAGCCAATATCGATACTAATGGAGGGTATCATGACGAA
ACGTCGTTATCACAGCCGGTCTTCCAATATAACCACTTCTGGAAACAGCT
TCTTGATGCTCCAAGGCTAAGGTACAGTATTGATCCCAGAGACCGGATCT
ACGAAGAGTGGTACGCAAACATGAATGTTTTCTCGGCTTGCCAACTTACA
GCTCCCTCGGACAAGCTTGTGGCCATTTCTGGCTTGGCAAAGGATGTTCT
GAAGCGCCTCGAAAATCTTGGTTATGACAAAGACGTTTATCTTGCTGGGC
TTTGGCGTCAGAATCTACCCGGCTGTTTGACTTGGAAGATCTTTGAACCC
TGTCGCAGACCTCCTTTGTATCGCGCCCCTTCCTGGTCGTGGGCTTCTGT
GGACGGTGCTGTTAAGTTTCCAGACACAGATATTGTCCAGAGGAAAGCTG
CTTGCTCTTTAGCACTTGTCATCGGCGCTGAATGTATTCCTTGCGGAGAA
GATGAGACTGGTCAAGTGAGCAGTGGCACTGTCACCTTGAAAGGACCCAT
CGCGTCTGCAAAGCTCATTTCAAGTGCCTCGAATTTGGAAGACACTGCCA
TGTCTGTACAGAGCCTTGAGGCCCTTGAAGTGGAAGGTCATAAGACTACG
GTGAAATATCCGCCAGGTTTGTGCAAGGTTATATTTGATGTCAAGAGCGA
AATGCGCGCCGAGATCTACTGCCTGCCAATTGAAGCTTTTCATGTGGCCA
GAAAGTTTTGGAAGTTATCTGGCTTGGCTTTAATTCGGACTGGGAGAGGC
ACGTACTCTCGAGTTGGCTACGTTGGAATGTTGCACGAGAGTGAGGCGGC
TGCGAAGAAATTTTTCTCTGGGTTTCCGGAGTATACTTGCGTCTTCGAGT
GA back to topCoding sequence (CDS) from alignment at ch3:4175699..4177550- >KJC3_004194-T1 ID=KJC3_004194-T1|Name=KJC3_004194-T1|organism=Aspergillus niger KJC3|type=CDS|length=3522bp|location=Sequence derived from alignment at ch3:4175699..4177550- (Aspergillus niger KJC3)
GCCTGGATGAAAACTTGAACTTTGAAATAGGGGCATCTACTGGCGACCAG
ACAACGTGGGTGTTAATTGAGCGGTGGCTGAATCGGTGTCTTCAAGGACA
TCCGACTTGCGATTACCAACATGATGAGGCAAAGTTTATCCCAAGCCGGC
TATTAGAGCTACATACAATCAGTTCTGAGAAGAAAATGTTCCGTGTTGTT
GAGAGGCAACAGATCCAGCCCGAGGAGCGCTACATAACTCTAAGCCACTG
CTGGGGCTCAACACCATCTAACCCCAATTTGATCTTGTTGAAAGACACAT
TCCAGAGTCTCAGAGAGTACCAGCAACTCTCTGTCCTTCCAAAAACATTC
AGAGACGCTTTCACCATTATCGAACGGTTGAGAATCCGTTACATATGGAT
TGACCGTCTCTGTATACTCCAGGATTCTGCTGAGGACTGGCAAAGAGAAT
CCGCAGCTATGGGGCAAGTTTACAGGAATGCTTTTCTGGGGATATCTGCA
TTAAGCTCTAGCAACGATGCTGGTGGCTGTTTTTTCTCGCGCGACTCTGC
AAAAGTTGCCCCTAGCATCGTCAACATACGTGTCGATGATTCGAGTGATC
CTAAGTCATTCAGGTCTCGCGGAGAAAAAGGATGGCCTTTGCCACGAAAA
TTTGGGCAAGAACCTCTGCCAAAGCGAGGTTGGATTTTGCAGGAACGCCT
TTTATGCCCACGTGTTCTGCACTTCGGTCGGGAACAAGTTTTCTGGGAAT
GCAGGGAATGTACCTGCTGTGAAACACAACCGAACAATGCTTACGAGCGT
GATGATCGTCCTCGCAGAGCCAATATCGATACTAATGGAGGGTATCATGA
CGAAACGTCGTTATCACAGCCGGTCTTCCAATATAACCACTTCTGGAAAC
AGCTTCTTGATGCTCCAAGGCTAAGGTACAGTATTGATCCCAGAGACCGG
ATCTACGAAGAGTGGTACGCAAACATGAATGTTTTCTCGGCTTGCCAACT
TACAGCTCCCTCGGACAAGCTTGTGGCCATTTCTGGCTTGGCAAAGGATG
TTCTGAAGCGCCTCGAAAATCTTGGTTATGACAAAGACGTTTATCTTGCT
GGGCTTTGGCGTCAGAATCTACCCGGCTGTTTGACTTGGAAGATCTTTGA
ACCCTGTCGCAGACCTCCTTTGTATCGCGCCCCTTCCTGGTCGTGGGCTT
CTGTGGACGGTGCTGTTAAGTTTCCAGACACAGATATTGTCCAGAGGAAA
GCTGCTTGCTCTTTAGCACTTGTCATCGGCGCTGAATGTATTCCTTGCGG
AGAAGATGAGACTGGTCAAGTGAGCAGTGGCACTGTCACCTTGAAAGGAC
CCATCGCGTCTGCAAAGCTCATTTCAAGTGCCTCGAATTTGGAAGACACT
GCCATGTCTGTACAGAGCCTTGAGGCCCTTGAAGTGGAAGGTCATAAGAC
TACGGTGAAATATCCGCCAGGTTTGTGCAAGGTTATATTTGATGTCAAGA
GCGAAATGCGCGCCGAGATCTACTGCCTGCCAATTGAAGCTTTTCATGTG
GCCAGAAAGTTTTGGAAGTTATCTGGCTTGGCTTTAATTCGGACTGGGAG
AGGCACGTACTCTCGAGTTGGCTACGTTGGAATGTTGCACGAGAGTGAGG
CGGCTGCGAAGAAATTTTTCTCTGGGTTTCCGGAGTATACTTGCGTCTTC
GAGTGAATGGTGGTGTGCTATGGAGAGATTTACCACGTCTACGATATGAT
TCCGCATAAAGGCCTGGATGAAAACTTGAACTTTGAAATAGGGGCATCTA
CTGGCGACCAGACAACGTGGGTGTTAATTGAGCGGTGGCTGAATCGGTGT
CTTCAAGGACATCCGACTTGCGATTACCAACATGATGAGGCAAAGTTTAT
CCCAAGCCGGCTATTAGAGCTACATACAATCAGTTCTGAGAAGAAAATGT
TCCGTGTTGTTGAGAGGCAACAGATCCAGCCCGAGGAGCGCTACATAACT
CTAAGCCACTGCTGGGGCTCAACACCATCTAACCCCAATTTGATCTTGTT
GAAAGACACATTCCAGAGTCTCAGAGAGTACCAGCAACTCTCTGTCCTTC
CAAAAACATTCAGAGACGCTTTCACCATTATCGAACGGTTGAGAATCCGT
TACATATGGATTGACCGTCTCTGTATACTCCAGGATTCTGCTGAGGACTG
GCAAAGAGAATCCGCAGCTATGGGGCAAGTTTACAGGAATGCTTTTCTGG
GGATATCTGCATTAAGCTCTAGCAACGATGCTGGTGGCTGTTTTTTCTCG
CGCGACTCTGCAAAAGTTGCCCCTAGCATCGTCAACATACGTGTCGATGA
TTCGAGTGATCCTAAGTCATTCAGGTCTCGCGGAGAAAAAGGATGGCCTT
TGCCACGAAAATTTGGGCAAGAACCTCTGCCAAAGCGAGGTTGGATTTTG
CAGGAACGCCTTTTATGCCCACGTGTTCTGCACTTCGGTCGGGAACAAGT
TTTCTGGGAATGCAGGGAATGTACCTGCTGTGAAACACAACCGAACAATG
CTTACGAGCGTGATGATCGTCCTCGCAGAGCCAATATCGATACTAATGGA
GGGTATCATGACGAAACGTCGTTATCACAGCCGGTCTTCCAATATAACCA
CTTCTGGAAACAGCTTCTTGATGCTCCAAGGCTAAGGTACAGTATTGATC
CCAGAGACCGGATCTACGAAGAGTGGTACGCAAACATGAATGTTTTCTCG
GCTTGCCAACTTACAGCTCCCTCGGACAAGCTTGTGGCCATTTCTGGCTT
GGCAAAGGATGTTCTGAAGCGCCTCGAAAATCTTGGTTATGACAAAGACG
TTTATCTTGCTGGGCTTTGGCGTCAGAATCTACCCGGCTGTTTGACTTGG
AAGATCTTTGAACCCTGTCGCAGACCTCCTTTGTATCGCGCCCCTTCCTG
GTCGTGGGCTTCTGTGGACGGTGCTGTTAAGTTTCCAGACACAGATATTG
TCCAGAGGAAAGCTGCTTGCTCTTTAGCACTTGTCATCGGCGCTGAATGT
ATTCCTTGCGGAGAAGATGAGACTGGTCAAGTGAGCAGTGGCACTGTCAC
CTTGAAAGGACCCATCGCGTCTGCAAAGCTCATTTCAAGTGCCTCGAATT
TGGAAGACACTGCCATGTCTGTACAGAGCCTTGAGGCCCTTGAAGTGGAA
GGTCATAAGACTACGGTGAAATATCCGCCAGGTTTGTGCAAGGTTATATT
TGATGTCAAGAGCGAAATGCGCGCCGAGATCTACTGCCTGCCAATTGAAG
CTTTTCATGTGGCCAGAAAGTTTTGGAAGTTATCTGGCTTGGCTTTAATT
CGGACTGGGAGAGGCACGTACTCTCGAGTTGGCTACGTTGGAATGTTGCA
CGAGAGTGAGGCGGCTGCGAAGAAATTTTTCTCTGGGTTTCCGGAGTATA
CTTGCGTCTTCGAGTGAATGGTGGTGTGCTATGGAGAGATTTACCACGTC
TACGATATGATTCCGCATAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4175699..4177550 - |
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