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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4185486..4186517+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004196-T1 ID=KJC3_004196-T1|Name=KJC3_004196-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1032bp|location=Sequence derived from alignment at ch3:4185486..4186517+ (Aspergillus niger KJC3)
ATGTACTCTTCCCCAAGCGGTAGTTGTGCCAAGTGCGGGAAACATACATC
CCTGCAGTGTGCTGGCTGCAAAGGCGCCCCGGAATACTTCCCTGGCGATG
TTAAAAGCATCTTCTACTGCAGTACAGCCTGCCAGAGGGCCCATCGAACG
ATCCACAAGCCCGATTGTATGTCCATGACTCGTCGGAAGAAGCTTCTGCG
GGCTGCTATCGTCGCCAAGGAGGCATTCTTGGTGTACAGAGCTGTCGAAT
ATGATCTTGAACTTTCCAAGATTGAACGACGAGGCGACACTCTTTACCTC
TCTGACAACCAGAAGAATCTGGACATTCCTCCCCGGCGCGGCCCCTTTCC
TGAATATCTGACTGCCGACCCGGTGTATCGGGAAGCCGCTTTGACATGGT
TCCAATGCGACGCTGCTCACGCCCTGTCGAGCCGTCATATAAGCAAGCTC
CTAGCAGGTATGATCAACTCCCAGCCTAAGTCTCCTCCATTTACACGCTG
AAATACGTGAAACTGACACCAACAAGACGTCCCCTGCGCGATTGAGATGT
TTTCGCTCCGAATCGGAAAGCCGCATTTCATAACGCAGGTCATTCCCGGC
CCCGACTCACCCAACATCCCCAGCCTCGACGCCTCAACCATGCCCCATTC
AGTGTTGAAGGTCGATCTTCAACTGTCGTCTTTTACTGAGAGCTGGATTG
TCGACCTCACAGGTGCTCAGTACGGCTTCCAAGAAGTCCTTGTTCCTTTC
CTCAAGTACATGGAAAATAAGGAATGCGAATTAGTGGATCCCCCAGAGTC
CTTCGACATCACTCAGACACATGACCTGGACATCTTGATGAAAGAATACC
CTTCTGGAGTCCGGCGAGCTATAGCATGTGCGGAGCGTCCGGCACGGCTG
CGTTTTGCTGCTTTTGTGGATACCATCGACAAGAAGATCTTGGAGGGGTC
GCTTGGCGAGTTCGAGAATAAATTGAGTGCCTTTCGATTGGCATTGAGGC
AGCACATGTCGAACAATACCCAGCGTGTTTGA back to topCoding sequence (CDS) from alignment at ch3:4185486..4186517+ >KJC3_004196-T1 ID=KJC3_004196-T1|Name=KJC3_004196-T1|organism=Aspergillus niger KJC3|type=CDS|length=1926bp|location=Sequence derived from alignment at ch3:4185486..4186517+ (Aspergillus niger KJC3)
ATGTACTCTTCCCCAAGCGGTAGTTGTGCCAAGTGCGGGAAACATACATC
CCTGCAGTGTGCTGGCTGCAAAGGCGCCCCGGAATACTTCCCTGGCGATG
TTAAAAGCATCTTCTACTGCAGTACAGCCTGCCAGAGGGCCCATCGAACG
ATCCACAAGCCCGATTGTATGTCCATGACTCGTCGGAAGAAGCTTCTGCG
GGCTGCTATCGTCGCCAAGGAGGCATTCTTGGTGTACAGAGCTGTCGAAT
ATGATCTTGAACTTTCCAAGATTGAACGACGAGGCGACACTCTTTACCTC
TCTGACAACCAGAAGAATCTGGACATTCCTCCCCGGCGCGGCCCCTTTCC
TGAATATCTGACTGCCGACCCGGTGTATCGGGAAGCCGCTTTGACATGGT
TCCAATGCGACGCTGCTCACGCCCTGTCGAGCCGTCATATAAGCAAGCTC
CTAGCAGACGTCCCCTGCGCGATTGAGATGTTTTCGCTCCGAATCGGAAA
GCCGCATTTCATAACGCAGGTCATTCCCGGCCCCGACTCACCCAACATCC
CCAGCCTCGACGCCTCAACCATGCCCCATTCAGTGTTGAAGGTCGATCTT
CAACTGTCGTCTTTTACTGAGAGCTGGATTGTCGACCTCACAGGTGCTCA
GTACGGCTTCCAAGAAGTCCTTGTTCCTTTCCTCAAGTACATGGAAAATA
AGGAATGCGAATTAGTGGATCCCCCAGAGTCCTTCGACATCACTCAGACA
CATGACCTGGACATCTTGATGAAAGAATACCCTTCTGGAGTCCGGCGAGC
TATAGCATGTGCGGAGCGTCCGGCACGGCTGCGTTTTGCTGCTTTTGTGG
ATACCATCGACAAGAAGATCTTGGAGGGGTCGCTTGGCGAGTTCGAGAAT
AAATTGAGTGCCTTTCGATTGGCATTGAGGCAGCACATGTCGAACAATAC
CCAGCGTGTTTGAATGTACTCTTCCCCAAGCGGTAGTTGTGCCAAGTGCG
GGAAACATACATCCCTGCAGTGTGCTGGCTGCAAAGGCGCCCCGGAATAC
TTCCCTGGCGATGTTAAAAGCATCTTCTACTGCAGTACAGCCTGCCAGAG
GGCCCATCGAACGATCCACAAGCCCGATTGTATGTCCATGACTCGTCGGA
AGAAGCTTCTGCGGGCTGCTATCGTCGCCAAGGAGGCATTCTTGGTGTAC
AGAGCTGTCGAATATGATCTTGAACTTTCCAAGATTGAACGACGAGGCGA
CACTCTTTACCTCTCTGACAACCAGAAGAATCTGGACATTCCTCCCCGGC
GCGGCCCCTTTCCTGAATATCTGACTGCCGACCCGGTGTATCGGGAAGCC
GCTTTGACATGGTTCCAATGCGACGCTGCTCACGCCCTGTCGAGCCGTCA
TATAAGCAAGCTCCTAGCAGACGTCCCCTGCGCGATTGAGATGTTTTCGC
TCCGAATCGGAAAGCCGCATTTCATAACGCAGGTCATTCCCGGCCCCGAC
TCACCCAACATCCCCAGCCTCGACGCCTCAACCATGCCCCATTCAGTGTT
GAAGGTCGATCTTCAACTGTCGTCTTTTACTGAGAGCTGGATTGTCGACC
TCACAGGTGCTCAGTACGGCTTCCAAGAAGTCCTTGTTCCTTTCCTCAAG
TACATGGAAAATAAGGAATGCGAATTAGTGGATCCCCCAGAGTCCTTCGA
CATCACTCAGACACATGACCTGGACATCTTGATGAAAGAATACCCTTCTG
GAGTCCGGCGAGCTATAGCATGTGCGGAGCGTCCGGCACGGCTGCGTTTT
GCTGCTTTTGTGGATACCATCGACAAGAAGATCTTGGAGGGGTCGCTTGG
CGAGTTCGAGAATAAATTGAGTGCCTTTCGATTGGCATTGAGGCAGCACA
TGTCGAACAATACCCAGCGTGTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002893 |
| DBxref | PFAM:PF01753 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4185486..4186517 + |
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