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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4233377..4234609+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004213-T1 ID=KJC3_004213-T1|Name=KJC3_004213-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1233bp|location=Sequence derived from alignment at ch3:4233377..4234609+ (Aspergillus niger KJC3)
GTCACCCTCTTGGTAATCCGTTTAACCCCTAGGGCTAGAGACAGTCAAGC
AGAGCCGTCCACACTAAGATTTGAGTCACTCGACATCATCTTCTCACTTC
CCAGTTCCTCTAAGCATCCCAATTCATTCCAGCATCTTCCTTTCTCTCTG
TCCTCACCAGCTCCAACATACCACAAAATGTCACTCATACCAAGCGTTGA
CAGTGCTCTCGACGCAATTGGAAACACACCATGTGTTCAATTGACCCGCG
TAGTACCTCAGGACTGCGCTCGAGTGTTCATAAAGCTAGAAAGCTTGAAT
CCTACCGGCTCGTACAAGGACCGCATGGCTCTCTCTGTCATCGAGGAAGC
GGAGCGTCGTAATGACCTTCGTCCGGGAATGACAGTCGTGGAAGCCACCG
GCGGCAGCACCGGGTCGTCCCTCGCCTTCGTCTGCGCCGTCAAGGGCTAC
ACCTTCCGTGTAGTCTCCTCCGATGCCTTTGCGAAGGAGAAGCTTAACAC
CATGACTGCGTTTGGGGCGCACCTGGACATCGTGCCGAGTGAGAATGGGA
AAATCACACCGCAACTGATTCCCTCTATGCGAGAGCGAGCACGCCGTATT
GCCACAGAGGATAAAGATCCTTCTTCTTATTACTACGCCGACCAATTTAG
CAATCCAGATGTCTTTCCAGGTTATGAAACCCTTGGTCGTGAGATACTAG
CACAGGTTGGAGAACCTATTGACGCCTTTTGTGGCGCGGTTGGGGGCGCA
GGGATGGTGATGGGTGTCGGGAAAACTCTGAAGCAGAGCTGGCCGGCGTG
CCATGTAGCTGTGCTTGAGCCTGCTTCGGCGCCTGCCTTGACCAAGGGCC
ATGGCGGCGAGCACTCGGTGGAAGGAATCGGTATTGGATTCCCTCCTCCT
CTACTTAACAAAGACTGGTATGACGAGGCACGGGCGATTGATGAGAGGGA
AGGGCGTTCCATGTGTCGACGACTAGCGAGGGAGGAGGGTCTTTTGGTTG
GCACTTCTTCGGGTCTTAATGTGGTCGCCGCGATACAGTTGGCTAAGGAA
CTGGGTCCTGGGAAAACAGTGGTGACTGTGGGGTGTGATACTGGTCTGAA
GTATGTTCGAGGAAACCTGTACACAGATAGCTGAAAGTGATCACCGGGCC
GAGACTTGTGTCAAGAATGCAATTTCCTTCTACTGACGTTTCCATTACAC
TTATCCAACTGGTCAGGGCTTCATAAACCAAAC back to topCoding sequence (CDS) from alignment at ch3:4233377..4234609+ >KJC3_004213-T1 ID=KJC3_004213-T1|Name=KJC3_004213-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at ch3:4233377..4234609+ (Aspergillus niger KJC3)
ATGTCACTCATACCAAGCGTTGACAGTGCTCTCGACGCAATTGGAAACAC
ACCATGTGTTCAATTGACCCGCGTAGTACCTCAGGACTGCGCTCGAGTGT
TCATAAAGCTAGAAAGCTTGAATCCTACCGGCTCGTACAAGGACCGCATG
GCTCTCTCTGTCATCGAGGAAGCGGAGCGTCGTAATGACCTTCGTCCGGG
AATGACAGTCGTGGAAGCCACCGGCGGCAGCACCGGGTCGTCCCTCGCCT
TCGTCTGCGCCGTCAAGGGCTACACCTTCCGTGTAGTCTCCTCCGATGCC
TTTGCGAAGGAGAAGCTTAACACCATGACTGCGTTTGGGGCGCACCTGGA
CATCGTGCCGAGTGAGAATGGGAAAATCACACCGCAACTGATTCCCTCTA
TGCGAGAGCGAGCACGCCGTATTGCCACAGAGGATAAAGATCCTTCTTCT
TATTACTACGCCGACCAATTTAGCAATCCAGATGTCTTTCCAGGTTATGA
AACCCTTGGTCGTGAGATACTAGCACAGGTTGGAGAACCTATTGACGCCT
TTTGTGGCGCGGTTGGGGGCGCAGGGATGGTGATGGGTGTCGGGAAAACT
CTGAAGCAGAGCTGGCCGGCGTGCCATGTAGCTGTGCTTGAGCCTGCTTC
GGCGCCTGCCTTGACCAAGGGCCATGGCGGCGAGCACTCGGTGGAAGGAA
TCGGTATTGGATTCCCTCCTCCTCTACTTAACAAAGACTGGTATGACGAG
GCACGGGCGATTGATGAGAGGGAAGGGCGTTCCATGTGTCGACGACTAGC
GAGGGAGGAGGGTCTTTTGGTTGGCACTTCTTCGGGTCTTAATGTGGTCG
CCGCGATACAGTTGGCTAAGGAACTGGGTCCTGGGAAAACAGTGGTGACT
GTGGGGTGTGATACTGGTCTGAAGTATGTTCGAGGAAACCTGTACACAGA
TAGCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004213-T1.utr5p1 | KJC3_004213-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004213-T1.utr3p1 | KJC3_004213-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.8 |
| Note | SMCOG1081:cysteine synthase |
| DBxref | InterPro:IPR001926 |
| DBxref | InterPro:IPR036052 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4233377..4234609 + |
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