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KJC3_004214-T1, KJC3_004214-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004214-T1
Unique NameKJC3_004214-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4234616..4236602-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004214-T1 ID=KJC3_004214-T1|Name=KJC3_004214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1987bp|location=Sequence derived from alignment at ch3:4234616..4236602- (Aspergillus niger KJC3)
CCTTTCGAATGGAGATTCCCTGGTAGTATATACAATGTATCTCCCTGTCA
GACCTAGACCCAAGAAAACCGATATTATCCGGTCACGCAATGGGTGCAAG
AGTTGTAGGCAGAGGCGAACCAAAGTACTTCCCCCTGGGTATGTTTGACT
TGGCTGTTCTGAAGACTGACATAAGGCTAGTGTGATGAAAAACAGCCCAC
GTGTGGGACTTGCGCCAGGTTAGGCAAAACATGCGAGCGCTTTTCTGAGG
ATTTGCAATTCCGTGTTGTGACTTCCTCAGATCCTCGAATGCCAAAGAGG
CTGAGAGGGAAAGACCGCTCTCATACACGCCTAGGGCTAAGTCACGTAGA
ACCTGAGGGCGTTTCTTGCGGCAGTATGGATCTGATAAGGTCGCTACAAC
ATACAGAACGGGACGTTTTCTACCTTACGTATTGGGAAGATCAGTGCCTG
CCAACTCTGCATCCCATCCTCCGCTTCTTTACCCAGTCAGCAGCAGCAAA
CGTGATGTTGAAGAACACAATGCTAGCCCTGTCAGCTTGTAATCTCAGCC
GCCTCAACCCAGAAGTCAGAATGCGCTCAGAGAGCTTCCACATGGGGAAG
TTCAGACCCAACTTAATCCATCAGACCAGAAGTCAGCTTTACTATTCAGC
TGCAATAAGCAGACTTGTCAACTCGGATCAACTTCATGACCAGCGGGTAG
CGATAACTGTGTTAGCCGTTATTGTTATCCTTTCGTATATGGAGTCTTCA
ATGTCTAATTTTACGGCCTTTTACTGTCATACGGATGGGCTCTTTCGCTT
TCTCACAAATCTGAATGACTATGCTCAAGATGAGACAGTTCGGGGTCTTC
TAACCACATGGATGCAAAGCCGGCTTTCGGTTTGGTGGATGCGCTCCTAC
TTTAGCTCGGTAAAGCTGCAGCGGCTTCTGCCATCGATCCCTCTGCCACG
CATCCTCCAAGGGCAGCCAAAGTCCTTGCATGAGCGCCGTGTCGAGATTA
TGAGTATAATGTGTGACTCGCATTATCTGAGTAACTCTTGCATACTCCGA
CACTGGGATTGTGAACAAAGCACAGAGACCGTAATTCCTGAACCATCAGA
CGCACCCGGCACTGATGCATTGCATTTCCACGTGCTCCTCGCCCACCAAG
TCCAGCGTCTAGATCGCTGGATCCAGCACCTCTCACCCGCCGAACAGCCA
TTGATGGATTCAGCCTCAACAGGAGATATTACCACTCCACTGCGCTTCAC
CTCCCACGACGCCGCGCTAAACTACGCTTATTACCTCACCAGTTGTATCC
TACAATGCCAGACTATTTTCTGCACCCTTCCTCCAACATGCCCTACTATT
GCAACAAGGGAAGGCCAAACAGCAGACCCCTACGTTGGGCTACTCCTCCG
CATTGCTAAAGCCTCGCCGCCAGCCCATCACCTCAAGCAAAACATATACA
CAATCGGATTCACAAACCTTCTTCTCACCGCCCTCCTCCGCACCACGTCT
GTTTCCCTTGCCATCGAGATCGAGAATTTTGTACAGAGCTTGGCCGACAC
CCTACCAACAGAAGAAGGCGGGTTCCCAATTTACCAAGCCCTAGCGGTAA
TCAAGTTGATCAATGTGCGGAAAATGGCAGGGAAGGATGTGGTTGCCGTT
TCGCAGCCGGTAGATGATCATGGCGGGGAACCAAAATTCCAATCTTATAA
CAGCCAGGCTATACGGGATCTATTCTTCCATGGGAAGGAACGCACGGGAG
GCGCTTTATTCAAAGAGCGAGTAGTTATTGGCCGTGCGGGCAAGTTGAAT
GGAGGAGAGTGGAGATGGGGGAGAGGAAGAAGACGGCCTGTTATCTATGT
GTCGAGGTTCGATGGGTTCTGATCTTAACTAGTATACTTTGTAATTCTAC
TCTCAGCTCTTTTGTTGTCGACAGCATGATGGTAACATGAACTTGTAGAA
CCACGAGTTAAGGTTTTGTTTCAAAATTTGCAACAAC
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Coding sequence (CDS) from alignment at ch3:4234616..4236602-

>KJC3_004214-T1 ID=KJC3_004214-T1|Name=KJC3_004214-T1|organism=Aspergillus niger KJC3|type=CDS|length=3564bp|location=Sequence derived from alignment at ch3:4234616..4236602- (Aspergillus niger KJC3)
TGTGATGAAAAACAGCCCACGTGTGGGACTTGCGCCAGGTTAGGCAAAAC
ATGCGAGCGCTTTTCTGAGGATTTGCAATTCCGTGTTGTGACTTCCTCAG
ATCCTCGAATGCCAAAGAGGCTGAGAGGGAAAGACCGCTCTCATACACGC
CTAGGGCTAAGTCACGTAGAACCTGAGGGCGTTTCTTGCGGCAGTATGGA
TCTGATAAGGTCGCTACAACATACAGAACGGGACGTTTTCTACCTTACGT
ATTGGGAAGATCAGTGCCTGCCAACTCTGCATCCCATCCTCCGCTTCTTT
ACCCAGTCAGCAGCAGCAAACGTGATGTTGAAGAACACAATGCTAGCCCT
GTCAGCTTGTAATCTCAGCCGCCTCAACCCAGAAGTCAGAATGCGCTCAG
AGAGCTTCCACATGGGGAAGTTCAGACCCAACTTAATCCATCAGACCAGA
AGTCAGCTTTACTATTCAGCTGCAATAAGCAGACTTGTCAACTCGGATCA
ACTTCATGACCAGCGGGTAGCGATAACTGTGTTAGCCGTTATTGTTATCC
TTTCGTATATGGAGTCTTCAATGTCTAATTTTACGGCCTTTTACTGTCAT
ACGGATGGGCTCTTTCGCTTTCTCACAAATCTGAATGACTATGCTCAAGA
TGAGACAGTTCGGGGTCTTCTAACCACATGGATGCAAAGCCGGCTTTCGG
TTTGGTGGATGCGCTCCTACTTTAGCTCGGTAAAGCTGCAGCGGCTTCTG
CCATCGATCCCTCTGCCACGCATCCTCCAAGGGCAGCCAAAGTCCTTGCA
TGAGCGCCGTGTCGAGATTATGAGTATAATGTGTGACTCGCATTATCTGA
GTAACTCTTGCATACTCCGACACTGGGATTGTGAACAAAGCACAGAGACC
GTAATTCCTGAACCATCAGACGCACCCGGCACTGATGCATTGCATTTCCA
CGTGCTCCTCGCCCACCAAGTCCAGCGTCTAGATCGCTGGATCCAGCACC
TCTCACCCGCCGAACAGCCATTGATGGATTCAGCCTCAACAGGAGATATT
ACCACTCCACTGCGCTTCACCTCCCACGACGCCGCGCTAAACTACGCTTA
TTACCTCACCAGTTGTATCCTACAATGCCAGACTATTTTCTGCACCCTTC
CTCCAACATGCCCTACTATTGCAACAAGGGAAGGCCAAACAGCAGACCCC
TACGTTGGGCTACTCCTCCGCATTGCTAAAGCCTCGCCGCCAGCCCATCA
CCTCAAGCAAAACATATACACAATCGGATTCACAAACCTTCTTCTCACCG
CCCTCCTCCGCACCACGTCTGTTTCCCTTGCCATCGAGATCGAGAATTTT
GTACAGAGCTTGGCCGACACCCTACCAACAGAAGAAGGCGGGTTCCCAAT
TTACCAAGCCCTAGCGGTAATCAAGTTGATCAATGTGCGGAAAATGGCAG
GGAAGGATGTGGTTGCCGTTTCGCAGCCGGTAGATGATCATGGCGGGGAA
CCAAAATTCCAATCTTATAACAGCCAGGCTATACGGGATCTATTCTTCCA
TGGGAAGGAACGCACGGGAGGCGCTTTATTCAAAGAGCGAGTAGTTATTG
GCCGTGCGGGCAAGTTGAATGGAGGAGAGTGGAGATGGGGGAGAGGAAGA
AGACGGCCTGTTATCTATGTGTCGAGGTTCGATGGGTTCTGAATGTATCT
CCCTGTCAGACCTAGACCCAAGAAAACCGATATTATCCGGTCACGCAATG
GGTGCAAGAGTTGTAGGCAGAGGCGAACCAAATGTGATGAAAAACAGCCC
ACGTGTGGGACTTGCGCCAGGTTAGGCAAAACATGCGAGCGCTTTTCTGA
GGATTTGCAATTCCGTGTTGTGACTTCCTCAGATCCTCGAATGCCAAAGA
GGCTGAGAGGGAAAGACCGCTCTCATACACGCCTAGGGCTAAGTCACGTA
GAACCTGAGGGCGTTTCTTGCGGCAGTATGGATCTGATAAGGTCGCTACA
ACATACAGAACGGGACGTTTTCTACCTTACGTATTGGGAAGATCAGTGCC
TGCCAACTCTGCATCCCATCCTCCGCTTCTTTACCCAGTCAGCAGCAGCA
AACGTGATGTTGAAGAACACAATGCTAGCCCTGTCAGCTTGTAATCTCAG
CCGCCTCAACCCAGAAGTCAGAATGCGCTCAGAGAGCTTCCACATGGGGA
AGTTCAGACCCAACTTAATCCATCAGACCAGAAGTCAGCTTTACTATTCA
GCTGCAATAAGCAGACTTGTCAACTCGGATCAACTTCATGACCAGCGGGT
AGCGATAACTGTGTTAGCCGTTATTGTTATCCTTTCGTATATGGAGTCTT
CAATGTCTAATTTTACGGCCTTTTACTGTCATACGGATGGGCTCTTTCGC
TTTCTCACAAATCTGAATGACTATGCTCAAGATGAGACAGTTCGGGGTCT
TCTAACCACATGGATGCAAAGCCGGCTTTCGGTTTGGTGGATGCGCTCCT
ACTTTAGCTCGGTAAAGCTGCAGCGGCTTCTGCCATCGATCCCTCTGCCA
CGCATCCTCCAAGGGCAGCCAAAGTCCTTGCATGAGCGCCGTGTCGAGAT
TATGAGTATAATGTGTGACTCGCATTATCTGAGTAACTCTTGCATACTCC
GACACTGGGATTGTGAACAAAGCACAGAGACCGTAATTCCTGAACCATCA
GACGCACCCGGCACTGATGCATTGCATTTCCACGTGCTCCTCGCCCACCA
AGTCCAGCGTCTAGATCGCTGGATCCAGCACCTCTCACCCGCCGAACAGC
CATTGATGGATTCAGCCTCAACAGGAGATATTACCACTCCACTGCGCTTC
ACCTCCCACGACGCCGCGCTAAACTACGCTTATTACCTCACCAGTTGTAT
CCTACAATGCCAGACTATTTTCTGCACCCTTCCTCCAACATGCCCTACTA
TTGCAACAAGGGAAGGCCAAACAGCAGACCCCTACGTTGGGCTACTCCTC
CGCATTGCTAAAGCCTCGCCGCCAGCCCATCACCTCAAGCAAAACATATA
CACAATCGGATTCACAAACCTTCTTCTCACCGCCCTCCTCCGCACCACGT
CTGTTTCCCTTGCCATCGAGATCGAGAATTTTGTACAGAGCTTGGCCGAC
ACCCTACCAACAGAAGAAGGCGGGTTCCCAATTTACCAAGCCCTAGCGGT
AATCAAGTTGATCAATGTGCGGAAAATGGCAGGGAAGGATGTGGTTGCCG
TTTCGCAGCCGGTAGATGATCATGGCGGGGAACCAAAATTCCAATCTTAT
AACAGCCAGGCTATACGGGATCTATTCTTCCATGGGAAGGAACGCACGGG
AGGCGCTTTATTCAAAGAGCGAGTAGTTATTGGCCGTGCGGGCAAGTTGA
ATGGAGGAGAGTGGAGATGGGGGAGAGGAAGAAGACGGCCTGTTATCTAT
GTGTCGAGGTTCGATGGGTTCTGAATGTATCTCCCTGTCAGACCTAGACC
CAAGAAAACCGATATTATCCGGTCACGCAATGGGTGCAAGAGTTGTAGGC
AGAGGCGAACCAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004214KJC3_004214Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004214-T1KJC3_004214-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004214-T1.cdsKJC3_004214-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004214-T1.utr3p1KJC3_004214-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004214-T1.exon2KJC3_004214-T1.exon2Aspergillus niger KJC3exon
KJC3_004214-T1.exon1KJC3_004214-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004214-T1.utr5p1KJC3_004214-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_3.8
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4234616..4236602 -
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