|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4271267..4272525+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004225-T1 ID=KJC3_004225-T1|Name=KJC3_004225-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1259bp|location=Sequence derived from alignment at ch3:4271267..4272525+ (Aspergillus niger KJC3)
ATGACACTCTCCACCAAAATCATCACCGTCTTCGGTGCAACCGGTGCTTA
ACCTCCCTCACCCCCTCATTTCACACATAACTAAATATCTATATATTCGG
TCAGGCCGCCAAGGCAGCTCCGTCGTCCGCTCCCTCGTGCAAAACCCTAC
TTTTCACGTCCGCGCCATAACCAGGAACCCATCGTCGAGCAAAGCCAAAG
AACTCGCTTCCCTAGGAGCAGAGCTAGTCAAGGCCGATGGATTCAACCGA
CAGGAACTCCAGCATGCGTTTTCGGGTAGTTGGGGGGCGTTTGTTAATAC
GAACTCGGAAGATCCTGTGCGTATCCCCTCTCTCTCTCCTTGTCATCTAA
CCACCTGGGCAGTAGTATTGATTTGTTCTTTCCTAGGAACTATTATCCAA
AGGCCTCAACGACGCCGACCTAGGCAGCAACATCATCGAATGCGCCGCCT
TATCTGGCGTCCAGCATCTAGTGTATAGTTCCGGTCTTGCGATCACGGAA
ATGACGAACGGGGCGGTGCAATGTCCTGGACTTGATTGTTAGTATCACGT
ACATCCTTACTTATTCGATAGCCCATTCTATATCTCACTTGACTAACAGA
GACAAAAACAGTAAAAATCCAAGTCGAGCGACAGGCCTACACCACAAAGA
GCTTCAAATCCGTAACCCCCATCGTAGCCGCCTGGTTCATGGAGAACTGG
CTCGAGCCAGACTATGCCGACCTGTTCGGCGGATGGCCCACATTCCCTGA
CTCCGAGGGATATCTGACATACAAGACGCCCTTTTGGGGCGGGAAAGAAG
ATTTCCCCTGGATCAGCATGAAGGATGACTTTGGAGATTTGGTTCATGGG
GTGTTTGTTAATCCGCTTCGGTGGAATAGACGCCTGATTCAGGGGTCGAG
TGATATTGTTTCGTCGGCGGAGGTGGTGAATACGTTTGTTTCTGGTGAGT
TGATACCCTGATGAGTGGATGGGGTGGGTGCTAACGGTGATGGTGATAGT
CACTGGCAAAAAGGCCCGCTATGAGGTTCTGGCGGACCCGAATGATATGA
ATACGAAAGGGGAGTATTGGCGCGAGCAGGAGCGGGATGTGTTTGTTTAT
TCGCAGTTTCGGGATGGGGAGTATTTTGGGAACGGGCCTACGGAGATCCA
GACGGCTGCGGCGTTGAAGAAGGCGGCGTTTAAGGCGAAGGGGGGCAAGG
GGAGGGAGACGCTTATTACTGTGAGGGAGTTTATGGAGAGGGAGTTTGCG
AAGGTGTAA back to topCoding sequence (CDS) from alignment at ch3:4271267..4272525+ >KJC3_004225-T1 ID=KJC3_004225-T1|Name=KJC3_004225-T1|organism=Aspergillus niger KJC3|type=CDS|length=4995bp|location=Sequence derived from alignment at ch3:4271267..4272525+ (Aspergillus niger KJC3)
ATGACACTCTCCACCAAAATCATCACCGTCTTCGGTGCAACCGGCCGCCA
AGGCAGCTCCGTCGTCCGCTCCCTCGTGCAAAACCCTACTTTTCACGTCC
GCGCCATAACCAGGAACCCATCGTCGAGCAAAGCCAAAGAACTCGCTTCC
CTAGGAGCAGAGCTAGTCAAGGCCGATGGATTCAACCGACAGGAACTCCA
GCATGCGTTTTCGGGTAGTTGGGGGGCGTTTGTTAATACGAACTCGGAAG
ATCCTGAACTATTATCCAAAGGCCTCAACGACGCCGACCTAGGCAGCAAC
ATCATCGAATGCGCCGCCTTATCTGGCGTCCAGCATCTAGTGTATAGTTC
CGGTCTTGCGATCACGGAAATGACGAACGGGGCGGTGCAATGTCCTGGAC
TTGATTTAAAAATCCAAGTCGAGCGACAGGCCTACACCACAAAGAGCTTC
AAATCCGTAACCCCCATCGTAGCCGCCTGGTTCATGGAGAACTGGCTCGA
GCCAGACTATGCCGACCTGTTCGGCGGATGGCCCACATTCCCTGACTCCG
AGGGATATCTGACATACAAGACGCCCTTTTGGGGCGGGAAAGAAGATTTC
CCCTGGATCAGCATGAAGGATGACTTTGGAGATTTGGTTCATGGGGTGTT
TGTTAATCCGCTTCGGTGGAATAGACGCCTGATTCAGGGGTCGAGTGATA
TTGTTTCGTCGGCGGAGGTGGTGAATACGTTTGTTTCTGTCACTGGCAAA
AAGGCCCGCTATGAGGTTCTGGCGGACCCGAATGATATGAATACGAAAGG
GGAGTATTGGCGCGAGCAGGAGCGGGATGTGTTTGTTTATTCGCAGTTTC
GGGATGGGGAGTATTTTGGGAACGGGCCTACGGAGATCCAGACGGCTGCG
GCGTTGAAGAAGGCGGCGTTTAAGGCGAAGGGGGGCAAGGGGAGGGAGAC
GCTTATTACTGTGAGGGAGTTTATGGAGAGGGAGTTTGCGAAGGTGTAAA
TGACACTCTCCACCAAAATCATCACCGTCTTCGGTGCAACCGGCCGCCAA
GGCAGCTCCGTCGTCCGCTCCCTCGTGCAAAACCCTACTTTTCACGTCCG
CGCCATAACCAGGAACCCATCGTCGAGCAAAGCCAAAGAACTCGCTTCCC
TAGGAGCAGAGCTAGTCAAGGCCGATGGATTCAACCGACAGGAACTCCAG
CATGCGTTTTCGGGTAGTTGGGGGGCGTTTGTTAATACGAACTCGGAAGA
TCCTGAACTATTATCCAAAGGCCTCAACGACGCCGACCTAGGCAGCAACA
TCATCGAATGCGCCGCCTTATCTGGCGTCCAGCATCTAGTGTATAGTTCC
GGTCTTGCGATCACGGAAATGACGAACGGGGCGGTGCAATGTCCTGGACT
TGATTTAAAAATCCAAGTCGAGCGACAGGCCTACACCACAAAGAGCTTCA
AATCCGTAACCCCCATCGTAGCCGCCTGGTTCATGGAGAACTGGCTCGAG
CCAGACTATGCCGACCTGTTCGGCGGATGGCCCACATTCCCTGACTCCGA
GGGATATCTGACATACAAGACGCCCTTTTGGGGCGGGAAAGAAGATTTCC
CCTGGATCAGCATGAAGGATGACTTTGGAGATTTGGTTCATGGGGTGTTT
GTTAATCCGCTTCGGTGGAATAGACGCCTGATTCAGGGGTCGAGTGATAT
TGTTTCGTCGGCGGAGGTGGTGAATACGTTTGTTTCTGTCACTGGCAAAA
AGGCCCGCTATGAGGTTCTGGCGGACCCGAATGATATGAATACGAAAGGG
GAGTATTGGCGCGAGCAGGAGCGGGATGTGTTTGTTTATTCGCAGTTTCG
GGATGGGGAGTATTTTGGGAACGGGCCTACGGAGATCCAGACGGCTGCGG
CGTTGAAGAAGGCGGCGTTTAAGGCGAAGGGGGGCAAGGGGAGGGAGACG
CTTATTACTGTGAGGGAGTTTATGGAGAGGGAGTTTGCGAAGGTGTAAAT
GACACTCTCCACCAAAATCATCACCGTCTTCGGTGCAACCGGCCGCCAAG
GCAGCTCCGTCGTCCGCTCCCTCGTGCAAAACCCTACTTTTCACGTCCGC
GCCATAACCAGGAACCCATCGTCGAGCAAAGCCAAAGAACTCGCTTCCCT
AGGAGCAGAGCTAGTCAAGGCCGATGGATTCAACCGACAGGAACTCCAGC
ATGCGTTTTCGGGTAGTTGGGGGGCGTTTGTTAATACGAACTCGGAAGAT
CCTGAACTATTATCCAAAGGCCTCAACGACGCCGACCTAGGCAGCAACAT
CATCGAATGCGCCGCCTTATCTGGCGTCCAGCATCTAGTGTATAGTTCCG
GTCTTGCGATCACGGAAATGACGAACGGGGCGGTGCAATGTCCTGGACTT
GATTTAAAAATCCAAGTCGAGCGACAGGCCTACACCACAAAGAGCTTCAA
ATCCGTAACCCCCATCGTAGCCGCCTGGTTCATGGAGAACTGGCTCGAGC
CAGACTATGCCGACCTGTTCGGCGGATGGCCCACATTCCCTGACTCCGAG
GGATATCTGACATACAAGACGCCCTTTTGGGGCGGGAAAGAAGATTTCCC
CTGGATCAGCATGAAGGATGACTTTGGAGATTTGGTTCATGGGGTGTTTG
TTAATCCGCTTCGGTGGAATAGACGCCTGATTCAGGGGTCGAGTGATATT
GTTTCGTCGGCGGAGGTGGTGAATACGTTTGTTTCTGTCACTGGCAAAAA
GGCCCGCTATGAGGTTCTGGCGGACCCGAATGATATGAATACGAAAGGGG
AGTATTGGCGCGAGCAGGAGCGGGATGTGTTTGTTTATTCGCAGTTTCGG
GATGGGGAGTATTTTGGGAACGGGCCTACGGAGATCCAGACGGCTGCGGC
GTTGAAGAAGGCGGCGTTTAAGGCGAAGGGGGGCAAGGGGAGGGAGACGC
TTATTACTGTGAGGGAGTTTATGGAGAGGGAGTTTGCGAAGGTGTAAATG
ACACTCTCCACCAAAATCATCACCGTCTTCGGTGCAACCGGCCGCCAAGG
CAGCTCCGTCGTCCGCTCCCTCGTGCAAAACCCTACTTTTCACGTCCGCG
CCATAACCAGGAACCCATCGTCGAGCAAAGCCAAAGAACTCGCTTCCCTA
GGAGCAGAGCTAGTCAAGGCCGATGGATTCAACCGACAGGAACTCCAGCA
TGCGTTTTCGGGTAGTTGGGGGGCGTTTGTTAATACGAACTCGGAAGATC
CTGAACTATTATCCAAAGGCCTCAACGACGCCGACCTAGGCAGCAACATC
ATCGAATGCGCCGCCTTATCTGGCGTCCAGCATCTAGTGTATAGTTCCGG
TCTTGCGATCACGGAAATGACGAACGGGGCGGTGCAATGTCCTGGACTTG
ATTTAAAAATCCAAGTCGAGCGACAGGCCTACACCACAAAGAGCTTCAAA
TCCGTAACCCCCATCGTAGCCGCCTGGTTCATGGAGAACTGGCTCGAGCC
AGACTATGCCGACCTGTTCGGCGGATGGCCCACATTCCCTGACTCCGAGG
GATATCTGACATACAAGACGCCCTTTTGGGGCGGGAAAGAAGATTTCCCC
TGGATCAGCATGAAGGATGACTTTGGAGATTTGGTTCATGGGGTGTTTGT
TAATCCGCTTCGGTGGAATAGACGCCTGATTCAGGGGTCGAGTGATATTG
TTTCGTCGGCGGAGGTGGTGAATACGTTTGTTTCTGTCACTGGCAAAAAG
GCCCGCTATGAGGTTCTGGCGGACCCGAATGATATGAATACGAAAGGGGA
GTATTGGCGCGAGCAGGAGCGGGATGTGTTTGTTTATTCGCAGTTTCGGG
ATGGGGAGTATTTTGGGAACGGGCCTACGGAGATCCAGACGGCTGCGGCG
TTGAAGAAGGCGGCGTTTAAGGCGAAGGGGGGCAAGGGGAGGGAGACGCT
TATTACTGTGAGGGAGTTTATGGAGAGGGAGTTTGCGAAGGTGTAAATGA
CACTCTCCACCAAAATCATCACCGTCTTCGGTGCAACCGGCCGCCAAGGC
AGCTCCGTCGTCCGCTCCCTCGTGCAAAACCCTACTTTTCACGTCCGCGC
CATAACCAGGAACCCATCGTCGAGCAAAGCCAAAGAACTCGCTTCCCTAG
GAGCAGAGCTAGTCAAGGCCGATGGATTCAACCGACAGGAACTCCAGCAT
GCGTTTTCGGGTAGTTGGGGGGCGTTTGTTAATACGAACTCGGAAGATCC
TGAACTATTATCCAAAGGCCTCAACGACGCCGACCTAGGCAGCAACATCA
TCGAATGCGCCGCCTTATCTGGCGTCCAGCATCTAGTGTATAGTTCCGGT
CTTGCGATCACGGAAATGACGAACGGGGCGGTGCAATGTCCTGGACTTGA
TTTAAAAATCCAAGTCGAGCGACAGGCCTACACCACAAAGAGCTTCAAAT
CCGTAACCCCCATCGTAGCCGCCTGGTTCATGGAGAACTGGCTCGAGCCA
GACTATGCCGACCTGTTCGGCGGATGGCCCACATTCCCTGACTCCGAGGG
ATATCTGACATACAAGACGCCCTTTTGGGGCGGGAAAGAAGATTTCCCCT
GGATCAGCATGAAGGATGACTTTGGAGATTTGGTTCATGGGGTGTTTGTT
AATCCGCTTCGGTGGAATAGACGCCTGATTCAGGGGTCGAGTGATATTGT
TTCGTCGGCGGAGGTGGTGAATACGTTTGTTTCTGTCACTGGCAAAAAGG
CCCGCTATGAGGTTCTGGCGGACCCGAATGATATGAATACGAAAGGGGAG
TATTGGCGCGAGCAGGAGCGGGATGTGTTTGTTTATTCGCAGTTTCGGGA
TGGGGAGTATTTTGGGAACGGGCCTACGGAGATCCAGACGGCTGCGGCGT
TGAAGAAGGCGGCGTTTAAGGCGAAGGGGGGCAAGGGGAGGGAGACGCTT
ATTACTGTGAGGGAGTTTATGGAGAGGGAGTTTGCGAAGGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4271267..4272525 + |
|
