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KJC3_004233-T1, KJC3_004233-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004233-T1
Unique NameKJC3_004233-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4286457..4288632-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004233-T1 ID=KJC3_004233-T1|Name=KJC3_004233-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2176bp|location=Sequence derived from alignment at ch3:4286457..4288632- (Aspergillus niger KJC3)
AATAGTACCCTTAGTATTCCCTCAACTCAATTCCAACCACTACACAACAC
TCAACCTCACCCACAACACACCAGAAATAAAACACCATCATGCCCCTAAA
TTACCTCCTAACCGGCAGCACGGGCGGCCTCGGCTCCCTCATCCTGGACT
ACTTCACCACGCACTTTCCCCCAACCCAAGAATCATCCACAACAAACAGC
ATCACCTACGCCGCCGCCTCCTCCAACCCATCCAACTCCCATCGCTTCAC
TTCAAAAGGCATCCCCTTCCGCACAGTCAACTACGACGACCCGGAGACGC
TAGACGTTGCTTTCAAAGACGTAGAGAATCTTTTCTTCGTGAGCACGAAT
ACATTCGACGTCGAGAAGCGCAGACGACAGCATTTGAATGTGGTTGAGGC
GGCGAAGAGGAATGGTGTTAAGCATGTACGCTTACATTTCACTCCGTATA
ATATTTCCATATGAAAAAGATGCTAATGGTATGATAGGTATGGTACACCT
CTCTCGCCTTCGGAGGCCTGGGATCGAATTCCAAGGCCGCGGTGCAGCAG
GCGCATTATATGACGGAGGATATGTTGAGAGAGTACACCTCCCTCCCTTT
CCTTTCCACCTCCTTGTTTTTTATCACCATTTACTGATTATATTTCAGGT
CTGGAATTAATTACACCTCCATTCGCGAAGGAATCTACACTGAAGCATTC
CCTCTCTTCTTGAACTGGTATCCCCAGTCAACGACCCTCTATCTGCCCTC
TGCGTCAGGGAAGATCGCATTCACGCTCCGGTCTGAACTAGCGGAAGCAA
CGGCTAAGTTGATGTTAAAGGGCGGTCGCGATAAGGAGATTGTGTTGTTG
ACTGCGTCGGAGCCTGTTTCTATGCAGGAAATAGTGGAGGTTATTAATGA
GACGACTGATAGAGAGGTGAAGATTGAGATCGTCGATCCGGAGACATATG
TACGGGTCAACGGGGAGAATGATATCGGGGGCAAAGCGGAGGGATTCTTC
CGGCAGTTGGTGGGGTGGTTTGAGAGTATTGAGAATGGGGAGGCTGGGTT
TACGGATGGGTTGATGGGGGAGGTGTTGGGGAGGGAGCCGGTGACGCCGA
GGGAGGCGATTAGGGGGTTATTGGAGAAGGAGAGGGATTATACGTGGCAT
CAGAATTATAGCAAGTAATCGGTCGTTTGTATTCTTGTTATATATAATTA
CAGGTATATAGTTTAATGATGCAAACTTTTAAGATATGTAGAGATATTCT
CTTCATCACACGCGGTTGTCCTCCTCCCGGTCGTGTTGCGGATACCCCGT
GTGCGTGTCGCGATACACCGTCGCTTCTCCGTCACCTTCTTTCTCTAAAA
CCTCTTCCTCGTCTGCTCCCCAGGTTGATTCTCGCATGAATGGACTCCGT
CGGCGGATCTCTGGCCCCTTCCATACTAGCACTACAGGCACAACTGACAG
TGCCAGCCCGATGAACCCCAGCAATGACCCGGCCCAGCCATATCCCAGGT
TCTGGAATAGTTGGTAACTTGCCAGCGGTAGGAACGCGCCAAAGGAGTTA
CGTCCCAGAGATGCTGCGGACAATGCCGATGCGGCATACTTCTCATACGC
ATCCGTCAAGTAATTCACAACAGCCATGTAGATACTGTAGATGCCAATAC
CGGTAGCCCCGATGCCGAGGGTCGGGACAATCCAAGGCACAGAAGGAAAA
CTGGCCCAACCATACCAGAACAGCCCGCCTGCGAACAGCAAGCTGCCAAT
GATACTAGTATACAGACGGGCCTCCGGGATGGGTTTCCCGGGCTTCTCTT
TGTTGCGTTTCGCCGACCGCAAATACAGCATATCCTGAAGAGGATTGACG
AGAGTACCGATTAGAGCACCCACGGAGATGGCCAATTGAATGCACCCAGT
TTGCAAAGTATTCATGCCGTAGTTGGTGGAGAAGGTCTGAACGACACTGC
TGAAGAAGAGATACAGGATACCCCAGGCGAAAGAGATCCAGAGGGTGAAG
AAGGCAACGACGGGCTCGGTGAGGAGCATTCGTGTGGGCCGTTCGAAGGA
GATCTGCATCAGACGCCAGACGCTGGTGTTGTCTAGCTCGGCTTCGGCGT
AGATGGGGCGCTGCTTTTCTTTGCGGAGCTTCTTGGCCCGACGGGTGAGG
ATCACGTCCGCGCGGGTTTCGTACAG
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Coding sequence (CDS) from alignment at ch3:4286457..4288632-

>KJC3_004233-T1 ID=KJC3_004233-T1|Name=KJC3_004233-T1|organism=Aspergillus niger KJC3|type=CDS|length=2853bp|location=Sequence derived from alignment at ch3:4286457..4288632- (Aspergillus niger KJC3)
GTCTGGAATTAATTACACCTCCATTCGCGAAGGAATCTACACTGAAGCAT
TCCCTCTCTTCTTGAACTGGTATCCCCAGTCAACGACCCTCTATCTGCCC
TCTGCGTCAGGGAAGATCGCATTCACGCTCCGGTCTGAACTAGCGGAAGC
AACGGCTAAGTTGATGTTAAAGGGCGGTCGCGATAAGGAGATTGTGTTGT
TGACTGCGTCGGAGCCTGTTTCTATGCAGGAAATAGTGGAGGTTATTAAT
GAGACGACTGATAGAGAGGTGAAGATTGAGATCGTCGATCCGGAGACATA
TGTACGGGTCAACGGGGAGAATGATATCGGGGGCAAAGCGGAGGGATTCT
TCCGGCAGTTGGTGGGGTGGTTTGAGAGTATTGAGAATGGGGAGGCTGGG
TTTACGGATGGGTTGATGGGGGAGGTGTTGGGGAGGGAGCCGGTGACGCC
GAGGGAGGCGATTAGGGGGTTATTGGAGAAGGAGAGGGATTATACGTGGC
ATCAGAATTATAGCAAGTAAGTATGGTACACCTCTCTCGCCTTCGGAGGC
CTGGGATCGAATTCCAAGGCCGCGGTGCAGCAGGCGCATTATATGACGGA
GGATATGTTGAGAGAATGCCCCTAAATTACCTCCTAACCGGCAGCACGGG
CGGCCTCGGCTCCCTCATCCTGGACTACTTCACCACGCACTTTCCCCCAA
CCCAAGAATCATCCACAACAAACAGCATCACCTACGCCGCCGCCTCCTCC
AACCCATCCAACTCCCATCGCTTCACTTCAAAAGGCATCCCCTTCCGCAC
AGTCAACTACGACGACCCGGAGACGCTAGACGTTGCTTTCAAAGACGTAG
AGAATCTTTTCTTCGTGAGCACGAATACATTCGACGTCGAGAAGCGCAGA
CGACAGCATTTGAATGTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAGCA
TGTCTGGAATTAATTACACCTCCATTCGCGAAGGAATCTACACTGAAGCA
TTCCCTCTCTTCTTGAACTGGTATCCCCAGTCAACGACCCTCTATCTGCC
CTCTGCGTCAGGGAAGATCGCATTCACGCTCCGGTCTGAACTAGCGGAAG
CAACGGCTAAGTTGATGTTAAAGGGCGGTCGCGATAAGGAGATTGTGTTG
TTGACTGCGTCGGAGCCTGTTTCTATGCAGGAAATAGTGGAGGTTATTAA
TGAGACGACTGATAGAGAGGTGAAGATTGAGATCGTCGATCCGGAGACAT
ATGTACGGGTCAACGGGGAGAATGATATCGGGGGCAAAGCGGAGGGATTC
TTCCGGCAGTTGGTGGGGTGGTTTGAGAGTATTGAGAATGGGGAGGCTGG
GTTTACGGATGGGTTGATGGGGGAGGTGTTGGGGAGGGAGCCGGTGACGC
CGAGGGAGGCGATTAGGGGGTTATTGGAGAAGGAGAGGGATTATACGTGG
CATCAGAATTATAGCAAGTAAGTATGGTACACCTCTCTCGCCTTCGGAGG
CCTGGGATCGAATTCCAAGGCCGCGGTGCAGCAGGCGCATTATATGACGG
AGGATATGTTGAGAGAATGCCCCTAAATTACCTCCTAACCGGCAGCACGG
GCGGCCTCGGCTCCCTCATCCTGGACTACTTCACCACGCACTTTCCCCCA
ACCCAAGAATCATCCACAACAAACAGCATCACCTACGCCGCCGCCTCCTC
CAACCCATCCAACTCCCATCGCTTCACTTCAAAAGGCATCCCCTTCCGCA
CAGTCAACTACGACGACCCGGAGACGCTAGACGTTGCTTTCAAAGACGTA
GAGAATCTTTTCTTCGTGAGCACGAATACATTCGACGTCGAGAAGCGCAG
ACGACAGCATTTGAATGTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAGC
ATGTCTGGAATTAATTACACCTCCATTCGCGAAGGAATCTACACTGAAGC
ATTCCCTCTCTTCTTGAACTGGTATCCCCAGTCAACGACCCTCTATCTGC
CCTCTGCGTCAGGGAAGATCGCATTCACGCTCCGGTCTGAACTAGCGGAA
GCAACGGCTAAGTTGATGTTAAAGGGCGGTCGCGATAAGGAGATTGTGTT
GTTGACTGCGTCGGAGCCTGTTTCTATGCAGGAAATAGTGGAGGTTATTA
ATGAGACGACTGATAGAGAGGTGAAGATTGAGATCGTCGATCCGGAGACA
TATGTACGGGTCAACGGGGAGAATGATATCGGGGGCAAAGCGGAGGGATT
CTTCCGGCAGTTGGTGGGGTGGTTTGAGAGTATTGAGAATGGGGAGGCTG
GGTTTACGGATGGGTTGATGGGGGAGGTGTTGGGGAGGGAGCCGGTGACG
CCGAGGGAGGCGATTAGGGGGTTATTGGAGAAGGAGAGGGATTATACGTG
GCATCAGAATTATAGCAAGTAAGTATGGTACACCTCTCTCGCCTTCGGAG
GCCTGGGATCGAATTCCAAGGCCGCGGTGCAGCAGGCGCATTATATGACG
GAGGATATGTTGAGAGAATGCCCCTAAATTACCTCCTAACCGGCAGCACG
GGCGGCCTCGGCTCCCTCATCCTGGACTACTTCACCACGCACTTTCCCCC
AACCCAAGAATCATCCACAACAAACAGCATCACCTACGCCGCCGCCTCCT
CCAACCCATCCAACTCCCATCGCTTCACTTCAAAAGGCATCCCCTTCCGC
ACAGTCAACTACGACGACCCGGAGACGCTAGACGTTGCTTTCAAAGACGT
AGAGAATCTTTTCTTCGTGAGCACGAATACATTCGACGTCGAGAAGCGCA
GACGACAGCATTTGAATGTGGTTGAGGCGGCGAAGAGGAATGGTGTTAAG
CAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004233KJC3_004233Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004233-T1KJC3_004233-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004233-T1.cdsKJC3_004233-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004233-T1.utr3p1KJC3_004233-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004233-T1.exon3KJC3_004233-T1.exon3Aspergillus niger KJC3exon
KJC3_004233-T1.exon2KJC3_004233-T1.exon2Aspergillus niger KJC3exon
KJC3_004233-T1.exon1KJC3_004233-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004233-T1.utr5p1KJC3_004233-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4286457..4288632 -
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