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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4303513..4305438- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004239-T1 ID=KJC3_004239-T1|Name=KJC3_004239-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1926bp|location=Sequence derived from alignment at ch3:4303513..4305438- (Aspergillus niger KJC3)
GAATTATCAAATCGAGCTCATAGTAGCTGTCAATCCATCATGGAAGACAC
ACGCACGCAAACTGCCTCCCCGGCAGAAGAATCCCGTCGCAGCCATCACT
CCAGCAGCACCCTTCCGAACGAGCGCGATGACCAAGACATAGAGAAACAG
CGTCTTCACGGTGGCATGGCCGAAGGCACAAAGGACAAAGAACCCGACCC
CAATATCGTGGACTGGGATGGCCCCGATGACCCAGTATGTCTCCTCCCCG
ATGCCATCTATACCCCCAAACTCAAAGCTTAAACCACCGCCACCACCGAA
CCCTAACCACTCACAAAACTATGAACAATAGGAAAACCCTCAGAACTTCC
CCCGCCCCCGCAAATGGCTCATAACCATAATTCTCGGGCTCATGACCGTC
TCGGTAACCTTCGCCTCGTCCGTCTTCAGCACCGCGTCCACTGTGACCGC
GCAACAATTCCACGTCTCCGACGAGGTAATGGTCCTCGGCACCAGCCTCT
TCGTGCTCGGATACAGTTTCGGCCCGCTCTTCTTCGGCCCTCTCTCCGAA
CTCTACGGCCGCAAAACCCCCCTGTTCATGGGGTTTTTCATCTTCGCCAT
ATTCCAGATCCCTGTTGCTGTCGCCCAGAATCTCCAGACGATTATGATAT
GTCGGTTCCTGGGCGGGTTGTTCGCCAGCGCGCCACTGGCTATTGTCGGC
GGTATGCTGGCGGATTTATTCGGTCCTGTGGAACGGGGAATTGCGATCGC
GGTGTTCGCGGGCGCTACGTTCGTGGGACCAGTCGCGGGCCCGATTGTCG
GTGGGTTCATCACGATGAGTTACCTTGGGTGGCGGTGGACGGAGTACATC
ACTGCCATTATGGCATTTTTCTTCGGGGCTGTGGGGTTCCTGATTGTGCC
GGAGACGTTTGGGCCGACGTTACTGGAAAGGAGAGCGAGGAGGAAGAGGT
TCGAGACGAGGAATTGGGCACTGCATGCTAGGTCGGAGGAGATGCCTGTT
GATCTGAAGCATATTGCGACTGTTTATCTGATCAGGCCGTTTTTGATGCT
CGTCCGGGAACCGATATTGTTACTCATCACGCTGTACATGGGGTTTATTT
ATGGGTTCTTGTATCTTTGCTTTGAGGCGTATCCGGTTGCGTTTCAGGAG
TTGAGAGGGTGGAATGAGGGGGTGGGCGCATTGCCGTTTATTGCGATTGC
CGTTGGGGTGGTGTTTGGGTGCTGTGTTATTGTGTTCTTTACAAAGACGA
GGTTTCAGAAGGTGTTGGAGAGGGAGGGTCATGTTGTTCCTGAGGAGAGG
CTCATTCCCATGATGATTGGAGGGGTGTTGTTGCCTGCGGGCATGTTTTG
GTTTGGGTGGACGAGCAACCCGCACATTATTTGGGTACCGCAGGCCATTT
CCGGGGGGTTGTTGGGGGCTGGGATTTTGTTGATTTTTATGCAGGTATGG
TTACTTCTTTTCTATGTTTGTTGTTGGTGTGTGTGTGGTGCTAATGATAT
GGGTATAGGGGTTGAACTATATCATCGACTGCTACAACATCAACGCCAAC
TCGGCTATTGCAGCCAATTGCTTCTTTCGGTCAGGGCTGGGGGCGGGGTT
TCCGATGTTTGCTATTCCCATGGTGAGTTTTCACTCTTGTCTGCAGCTTT
ACTGGCTGCTTTGGTGAAATAAACATACTGATTGACGATGCAGTTCCATA
ATCTGGGCGTGCCGTGGGCCATGACGCTGCTGGGATGTCTGACAGCCATA
TTGTTCCCCGTGCCGATTCTATTCTATATCTTTGGGAGTAGAATTCGGTC
GTGGAGTAAGTTTGCGCCGACTGATTGATACCTTGAATGTGCTTTGTGGT
GAGATATCTGTAATGTGTTTAGTTGGTATGATATAGTCTTTATATGCTAT
AATACAGACTTGATTTTCTACACTCA back to topCoding sequence (CDS) from alignment at ch3:4303513..4305438- >KJC3_004239-T1 ID=KJC3_004239-T1|Name=KJC3_004239-T1|organism=Aspergillus niger KJC3|type=CDS|length=6228bp|location=Sequence derived from alignment at ch3:4303513..4305438- (Aspergillus niger KJC3)
TTCCATAATCTGGGCGTGCCGTGGGCCATGACGCTGCTGGGATGTCTGAC
AGCCATATTGTTCCCCGTGCCGATTCTATTCTATATCTTTGGGAGTAGAA
TTCGGTCGTGGAGTAAGTTTGCGCCGACTGATTGAGGGTTGAACTATATC
ATCGACTGCTACAACATCAACGCCAACTCGGCTATTGCAGCCAATTGCTT
CTTTCGGTCAGGGCTGGGGGCGGGGTTTCCGATGTTTGCTATTCCCATGG
AAAACCCTCAGAACTTCCCCCGCCCCCGCAAATGGCTCATAACCATAATT
CTCGGGCTCATGACCGTCTCGGTAACCTTCGCCTCGTCCGTCTTCAGCAC
CGCGTCCACTGTGACCGCGCAACAATTCCACGTCTCCGACGAGGTAATGG
TCCTCGGCACCAGCCTCTTCGTGCTCGGATACAGTTTCGGCCCGCTCTTC
TTCGGCCCTCTCTCCGAACTCTACGGCCGCAAAACCCCCCTGTTCATGGG
GTTTTTCATCTTCGCCATATTCCAGATCCCTGTTGCTGTCGCCCAGAATC
TCCAGACGATTATGATATGTCGGTTCCTGGGCGGGTTGTTCGCCAGCGCG
CCACTGGCTATTGTCGGCGGTATGCTGGCGGATTTATTCGGTCCTGTGGA
ACGGGGAATTGCGATCGCGGTGTTCGCGGGCGCTACGTTCGTGGGACCAG
TCGCGGGCCCGATTGTCGGTGGGTTCATCACGATGAGTTACCTTGGGTGG
CGGTGGACGGAGTACATCACTGCCATTATGGCATTTTTCTTCGGGGCTGT
GGGGTTCCTGATTGTGCCGGAGACGTTTGGGCCGACGTTACTGGAAAGGA
GAGCGAGGAGGAAGAGGTTCGAGACGAGGAATTGGGCACTGCATGCTAGG
TCGGAGGAGATGCCTGTTGATCTGAAGCATATTGCGACTGTTTATCTGAT
CAGGCCGTTTTTGATGCTCGTCCGGGAACCGATATTGTTACTCATCACGC
TGTACATGGGGTTTATTTATGGGTTCTTGTATCTTTGCTTTGAGGCGTAT
CCGGTTGCGTTTCAGGAGTTGAGAGGGTGGAATGAGGGGGTGGGCGCATT
GCCGTTTATTGCGATTGCCGTTGGGGTGGTGTTTGGGTGCTGTGTTATTG
TGTTCTTTACAAAGACGAGGTTTCAGAAGGTGTTGGAGAGGGAGGGTCAT
GTTGTTCCTGAGGAGAGGCTCATTCCCATGATGATTGGAGGGGTGTTGTT
GCCTGCGGGCATGTTTTGGTTTGGGTGGACGAGCAACCCGCACATTATTT
GGGTACCGCAGGCCATTTCCGGGGGGTTGTTGGGGGCTGGGATTTTGTTG
ATTTTTATGCAGATGGAAGACACACGCACGCAAACTGCCTCCCCGGCAGA
AGAATCCCGTCGCAGCCATCACTCCAGCAGCACCCTTCCGAACGAGCGCG
ATGACCAAGACATAGAGAAACAGCGTCTTCACGGTGGCATGGCCGAAGGC
ACAAAGGACAAAGAACCCGACCCCAATATCGTGGACTGGGATGGCCCCGA
TGACCCATTCCATAATCTGGGCGTGCCGTGGGCCATGACGCTGCTGGGAT
GTCTGACAGCCATATTGTTCCCCGTGCCGATTCTATTCTATATCTTTGGG
AGTAGAATTCGGTCGTGGAGTAAGTTTGCGCCGACTGATTGAGGGTTGAA
CTATATCATCGACTGCTACAACATCAACGCCAACTCGGCTATTGCAGCCA
ATTGCTTCTTTCGGTCAGGGCTGGGGGCGGGGTTTCCGATGTTTGCTATT
CCCATGGAAAACCCTCAGAACTTCCCCCGCCCCCGCAAATGGCTCATAAC
CATAATTCTCGGGCTCATGACCGTCTCGGTAACCTTCGCCTCGTCCGTCT
TCAGCACCGCGTCCACTGTGACCGCGCAACAATTCCACGTCTCCGACGAG
GTAATGGTCCTCGGCACCAGCCTCTTCGTGCTCGGATACAGTTTCGGCCC
GCTCTTCTTCGGCCCTCTCTCCGAACTCTACGGCCGCAAAACCCCCCTGT
TCATGGGGTTTTTCATCTTCGCCATATTCCAGATCCCTGTTGCTGTCGCC
CAGAATCTCCAGACGATTATGATATGTCGGTTCCTGGGCGGGTTGTTCGC
CAGCGCGCCACTGGCTATTGTCGGCGGTATGCTGGCGGATTTATTCGGTC
CTGTGGAACGGGGAATTGCGATCGCGGTGTTCGCGGGCGCTACGTTCGTG
GGACCAGTCGCGGGCCCGATTGTCGGTGGGTTCATCACGATGAGTTACCT
TGGGTGGCGGTGGACGGAGTACATCACTGCCATTATGGCATTTTTCTTCG
GGGCTGTGGGGTTCCTGATTGTGCCGGAGACGTTTGGGCCGACGTTACTG
GAAAGGAGAGCGAGGAGGAAGAGGTTCGAGACGAGGAATTGGGCACTGCA
TGCTAGGTCGGAGGAGATGCCTGTTGATCTGAAGCATATTGCGACTGTTT
ATCTGATCAGGCCGTTTTTGATGCTCGTCCGGGAACCGATATTGTTACTC
ATCACGCTGTACATGGGGTTTATTTATGGGTTCTTGTATCTTTGCTTTGA
GGCGTATCCGGTTGCGTTTCAGGAGTTGAGAGGGTGGAATGAGGGGGTGG
GCGCATTGCCGTTTATTGCGATTGCCGTTGGGGTGGTGTTTGGGTGCTGT
GTTATTGTGTTCTTTACAAAGACGAGGTTTCAGAAGGTGTTGGAGAGGGA
GGGTCATGTTGTTCCTGAGGAGAGGCTCATTCCCATGATGATTGGAGGGG
TGTTGTTGCCTGCGGGCATGTTTTGGTTTGGGTGGACGAGCAACCCGCAC
ATTATTTGGGTACCGCAGGCCATTTCCGGGGGGTTGTTGGGGGCTGGGAT
TTTGTTGATTTTTATGCAGATGGAAGACACACGCACGCAAACTGCCTCCC
CGGCAGAAGAATCCCGTCGCAGCCATCACTCCAGCAGCACCCTTCCGAAC
GAGCGCGATGACCAAGACATAGAGAAACAGCGTCTTCACGGTGGCATGGC
CGAAGGCACAAAGGACAAAGAACCCGACCCCAATATCGTGGACTGGGATG
GCCCCGATGACCCATTCCATAATCTGGGCGTGCCGTGGGCCATGACGCTG
CTGGGATGTCTGACAGCCATATTGTTCCCCGTGCCGATTCTATTCTATAT
CTTTGGGAGTAGAATTCGGTCGTGGAGTAAGTTTGCGCCGACTGATTGAG
GGTTGAACTATATCATCGACTGCTACAACATCAACGCCAACTCGGCTATT
GCAGCCAATTGCTTCTTTCGGTCAGGGCTGGGGGCGGGGTTTCCGATGTT
TGCTATTCCCATGGAAAACCCTCAGAACTTCCCCCGCCCCCGCAAATGGC
TCATAACCATAATTCTCGGGCTCATGACCGTCTCGGTAACCTTCGCCTCG
TCCGTCTTCAGCACCGCGTCCACTGTGACCGCGCAACAATTCCACGTCTC
CGACGAGGTAATGGTCCTCGGCACCAGCCTCTTCGTGCTCGGATACAGTT
TCGGCCCGCTCTTCTTCGGCCCTCTCTCCGAACTCTACGGCCGCAAAACC
CCCCTGTTCATGGGGTTTTTCATCTTCGCCATATTCCAGATCCCTGTTGC
TGTCGCCCAGAATCTCCAGACGATTATGATATGTCGGTTCCTGGGCGGGT
TGTTCGCCAGCGCGCCACTGGCTATTGTCGGCGGTATGCTGGCGGATTTA
TTCGGTCCTGTGGAACGGGGAATTGCGATCGCGGTGTTCGCGGGCGCTAC
GTTCGTGGGACCAGTCGCGGGCCCGATTGTCGGTGGGTTCATCACGATGA
GTTACCTTGGGTGGCGGTGGACGGAGTACATCACTGCCATTATGGCATTT
TTCTTCGGGGCTGTGGGGTTCCTGATTGTGCCGGAGACGTTTGGGCCGAC
GTTACTGGAAAGGAGAGCGAGGAGGAAGAGGTTCGAGACGAGGAATTGGG
CACTGCATGCTAGGTCGGAGGAGATGCCTGTTGATCTGAAGCATATTGCG
ACTGTTTATCTGATCAGGCCGTTTTTGATGCTCGTCCGGGAACCGATATT
GTTACTCATCACGCTGTACATGGGGTTTATTTATGGGTTCTTGTATCTTT
GCTTTGAGGCGTATCCGGTTGCGTTTCAGGAGTTGAGAGGGTGGAATGAG
GGGGTGGGCGCATTGCCGTTTATTGCGATTGCCGTTGGGGTGGTGTTTGG
GTGCTGTGTTATTGTGTTCTTTACAAAGACGAGGTTTCAGAAGGTGTTGG
AGAGGGAGGGTCATGTTGTTCCTGAGGAGAGGCTCATTCCCATGATGATT
GGAGGGGTGTTGTTGCCTGCGGGCATGTTTTGGTTTGGGTGGACGAGCAA
CCCGCACATTATTTGGGTACCGCAGGCCATTTCCGGGGGGTTGTTGGGGG
CTGGGATTTTGTTGATTTTTATGCAGATGGAAGACACACGCACGCAAACT
GCCTCCCCGGCAGAAGAATCCCGTCGCAGCCATCACTCCAGCAGCACCCT
TCCGAACGAGCGCGATGACCAAGACATAGAGAAACAGCGTCTTCACGGTG
GCATGGCCGAAGGCACAAAGGACAAAGAACCCGACCCCAATATCGTGGAC
TGGGATGGCCCCGATGACCCATTCCATAATCTGGGCGTGCCGTGGGCCAT
GACGCTGCTGGGATGTCTGACAGCCATATTGTTCCCCGTGCCGATTCTAT
TCTATATCTTTGGGAGTAGAATTCGGTCGTGGAGTAAGTTTGCGCCGACT
GATTGAGGGTTGAACTATATCATCGACTGCTACAACATCAACGCCAACTC
GGCTATTGCAGCCAATTGCTTCTTTCGGTCAGGGCTGGGGGCGGGGTTTC
CGATGTTTGCTATTCCCATGGAAAACCCTCAGAACTTCCCCCGCCCCCGC
AAATGGCTCATAACCATAATTCTCGGGCTCATGACCGTCTCGGTAACCTT
CGCCTCGTCCGTCTTCAGCACCGCGTCCACTGTGACCGCGCAACAATTCC
ACGTCTCCGACGAGGTAATGGTCCTCGGCACCAGCCTCTTCGTGCTCGGA
TACAGTTTCGGCCCGCTCTTCTTCGGCCCTCTCTCCGAACTCTACGGCCG
CAAAACCCCCCTGTTCATGGGGTTTTTCATCTTCGCCATATTCCAGATCC
CTGTTGCTGTCGCCCAGAATCTCCAGACGATTATGATATGTCGGTTCCTG
GGCGGGTTGTTCGCCAGCGCGCCACTGGCTATTGTCGGCGGTATGCTGGC
GGATTTATTCGGTCCTGTGGAACGGGGAATTGCGATCGCGGTGTTCGCGG
GCGCTACGTTCGTGGGACCAGTCGCGGGCCCGATTGTCGGTGGGTTCATC
ACGATGAGTTACCTTGGGTGGCGGTGGACGGAGTACATCACTGCCATTAT
GGCATTTTTCTTCGGGGCTGTGGGGTTCCTGATTGTGCCGGAGACGTTTG
GGCCGACGTTACTGGAAAGGAGAGCGAGGAGGAAGAGGTTCGAGACGAGG
AATTGGGCACTGCATGCTAGGTCGGAGGAGATGCCTGTTGATCTGAAGCA
TATTGCGACTGTTTATCTGATCAGGCCGTTTTTGATGCTCGTCCGGGAAC
CGATATTGTTACTCATCACGCTGTACATGGGGTTTATTTATGGGTTCTTG
TATCTTTGCTTTGAGGCGTATCCGGTTGCGTTTCAGGAGTTGAGAGGGTG
GAATGAGGGGGTGGGCGCATTGCCGTTTATTGCGATTGCCGTTGGGGTGG
TGTTTGGGTGCTGTGTTATTGTGTTCTTTACAAAGACGAGGTTTCAGAAG
GTGTTGGAGAGGGAGGGTCATGTTGTTCCTGAGGAGAGGCTCATTCCCAT
GATGATTGGAGGGGTGTTGTTGCCTGCGGGCATGTTTTGGTTTGGGTGGA
CGAGCAACCCGCACATTATTTGGGTACCGCAGGCCATTTCCGGGGGGTTG
TTGGGGGCTGGGATTTTGTTGATTTTTATGCAGATGGAAGACACACGCAC
GCAAACTGCCTCCCCGGCAGAAGAATCCCGTCGCAGCCATCACTCCAGCA
GCACCCTTCCGAACGAGCGCGATGACCAAGACATAGAGAAACAGCGTCTT
CACGGTGGCATGGCCGAAGGCACAAAGGACAAAGAACCCGACCCCAATAT
CGTGGACTGGGATGGCCCCGATGACCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004239-T1.utr3p1 | KJC3_004239-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004239-T1.utr5p1 | KJC3_004239-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4303513..4305438 - |
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