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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4322523..4325292- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004246-T1 ID=KJC3_004246-T1|Name=KJC3_004246-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2770bp|location=Sequence derived from alignment at ch3:4322523..4325292- (Aspergillus niger KJC3)
ATGCATTTCCGAAAGCGCCTGAAAGACTGGACGGCGACTCTCCGTCCGCC
AAGAAACTCCGGTCTTGATGTTTCTCAAGATACAAGTACTGCATCGGTGG
TGTCATCGCAAAACAATGATATCTCAGTCCCTCATGCTTGCCCTTCGAAC
GTTCCCAATCCTATCCCTTTAAGGCTCGAAGGGCTGTGGAAGAAAGCTTA
CTCGGACCTCCAAAATAAGAACCCTGACCTACTTGCCCAGTATGAAAAGA
TCCTCCTGTCGAACGCGGAATTGGATGACTCGAGCAATGAGAACCAAGGA
GACAATATTGACATTGATCCTCGACTTGAGACTTGCGTAAAAAGGCGTCT
TGAAGCGATCGAAAAGTTACGGTGCAAGATACGCATTGGAGGAAAAGAAA
TAGAAGTCAAGAAGCAAGTCCGTCGTGTTGTAGGGGGGATACTGTCCGTA
AAAGATATCATTACCGCGGCAGTGAGTGCGGAGCCACATGTCTCCATAGC
ATGGGCAGGCGTTTTGTTTTTACTGTATCCGTTGGCCAAATCATTTGATC
AGGATGAGGATGCTATGAACGGTTTTCAAGCTGTATCAGACCTTATGGTT
CGGTATGCATTCCTGGAGAGAAGTCAGGCCAAAATATACTCGAATTCCAG
CTTCACGGTAGCCGACCCGGGTCATGATTTTGCTAATTTAATCAGATCCA
AAACGGTTGAGCTGTACGTTCTTATACTTGAGTACCACATGTCTCTTGCC
ACGCACTTCGATCATGCCGGGTTCAGGCGATTCTTACACGACTGGACAGA
GATCGATAAGTGGCACAGCATGCTAAAGTCGATCACGAGTCTCGATGAGA
GCATTGGTCAGTATTTGGCAACATTCGCTGGAGATGATATCCAAAAGATC
CTCAAGGAACTGGAGAATTCACAACGGGTTGTAATGGACTCACTCTCTGT
GATAAAGGAAAATGTTGAGGTAGATACAACCATGGCCATCTGAGCAATAG
GACCCTACTGACGCGCAGTGATAATGACAGGAGACTAAACAAATAGAGCT
TCTCAAATTGCTTCCGCTGGTCGGAGAGGCAACGTTTGGGTCCCTTGCTG
ATCAAAACAAACCAGAATGCCTCGAGGGCACCCAGACGAAAATACTTCGT
GAGATTCAGACTTGGATTGAGTCTCCGGATGACTCTCAGATATTCTGGCT
CAGAGGAATGGCAGGAACCGGCAAATCTACAATCTCTCGTACCCTTGCTG
CTGCGTGCCAGCAAGGCAAATCACTTATTCCCAACGGGCCCCCTCTTCCC
GTGAACGTCTGTCTCGGTGCCAGTTTCTTCTTTGATCGAACTAAGCCGGG
GCGCAACTCCGTTGAGAAGTTGTTTCCTTCCATATCCAATAAGCTAGCAT
ATTCATTCCCAGATTCTAGAGACAAGATATGCCAAGCAATTCTGGACAAC
CAATCCATCGGCAATCAAAATTTGCATAACCAATGGAGCAAATTGATTTC
AGAGCCACTTTTGACACTCGATAAGGAACTTCTCCTACCCGTGACACTGG
TATTGGTGCTAGATGCACTTGACGAGTCTGTGTCTCAGGACCCCAAGGAG
GCTGGAGAACCAGCCCATGATATTGGAGGCGTCCTAACGCTTATAACCAC
AGCAGAAAAGTTGCAAAATATTCGACTGAAAATATTCCTTACCAGCAGGC
CAGAACTACGGTCTCAATTTTATGTTCCTTATAAAGAAGCTAATGTCCAC
GACTTTGAACTTCGAAAAATCCCAGTAATGTCCGAAGGGGCTAATCTTCC
GAAAGACGACATAACCTTCTATTTGGAGCATCAGGTTAAGCGAATTGTAT
CCCAAGCCACCGTCAACTACTCTGAGTCGCTAGCAAAATCTACCTGCTGG
CTCAGTCAAGATGAAGAAAGGAAGGTTGTCCGAGCTCTTGCCGATAAAAG
CGATGGTTTGTTCATTTATGCAGCCACCGCATGCCGCTTTTTGGATGGGG
TAGACTGCGACTTCGACGATTTGCAAGCACGCATGCGAGAAATATCTGGT
TACAGCTCAGAAGTAGATTCACCACAGGACAATTTGGATCAGATGTACAA
CCAAATCCTAAAATACTCTATAATGTATAGCTCGAGAAAAATAAAGAGCG
AGAAGAAAGATTTCTATGAGCTCTTTGAACGAATGATCGGAGCTGTTGTT
GTACTAGCAGAGCCTCTCACGATCGCGACCCTCGAAGACCTCTTGGATTT
TGCTGGAAAGGAAACCAAAACTCGAAGACTTTTGAACAGTTTAAGCTCTG
TCATATCTTGTGGGGTCAGTTTTGGATCACCTATTCAATTGCTACACATG
TCTTTTCGCGACTTTCTCGTTGGCCAACCCAACAGGAGATGTCTCTACGA
TGAATTCTGCATTGACCCAAGAAAGGCCCATAGGGCCCTTTTCGAGAGTT
GCTTAAAGCTGCTGTCGAGTACTCTGAAGCAAGACATTTGTTCTCTTGAG
GACCCATCCTTCCTGGCCAAAGATATTGGTTCATCTTTGCTGGACCGACA
TGTTCGAGTTTCCGTCAGATATGCTTCTCAATATTGGTCGCATCATCTCC
AACAAGCTGGAGTCAAGCTACTTGATAATGACTGCGTACATGAGTTTCTC
CAGAAGCATTTTCTGTGTTGGCTCGAGGTCATGAGCCTTCTTCAAATGAT
ACCGACAGCTATTGTTAACACCATCCAGCTTGAAAGTTACTTTGCGTCCC
TACCGGTAGGTATCAAATAA back to topCoding sequence (CDS) from alignment at ch3:4322523..4325292- >KJC3_004246-T1 ID=KJC3_004246-T1|Name=KJC3_004246-T1|organism=Aspergillus niger KJC3|type=CDS|length=5418bp|location=Sequence derived from alignment at ch3:4322523..4325292- (Aspergillus niger KJC3)
GAGACTAAACAAATAGAGCTTCTCAAATTGCTTCCGCTGGTCGGAGAGGC
AACGTTTGGGTCCCTTGCTGATCAAAACAAACCAGAATGCCTCGAGGGCA
CCCAGACGAAAATACTTCGTGAGATTCAGACTTGGATTGAGTCTCCGGAT
GACTCTCAGATATTCTGGCTCAGAGGAATGGCAGGAACCGGCAAATCTAC
AATCTCTCGTACCCTTGCTGCTGCGTGCCAGCAAGGCAAATCACTTATTC
CCAACGGGCCCCCTCTTCCCGTGAACGTCTGTCTCGGTGCCAGTTTCTTC
TTTGATCGAACTAAGCCGGGGCGCAACTCCGTTGAGAAGTTGTTTCCTTC
CATATCCAATAAGCTAGCATATTCATTCCCAGATTCTAGAGACAAGATAT
GCCAAGCAATTCTGGACAACCAATCCATCGGCAATCAAAATTTGCATAAC
CAATGGAGCAAATTGATTTCAGAGCCACTTTTGACACTCGATAAGGAACT
TCTCCTACCCGTGACACTGGTATTGGTGCTAGATGCACTTGACGAGTCTG
TGTCTCAGGACCCCAAGGAGGCTGGAGAACCAGCCCATGATATTGGAGGC
GTCCTAACGCTTATAACCACAGCAGAAAAGTTGCAAAATATTCGACTGAA
AATATTCCTTACCAGCAGGCCAGAACTACGGTCTCAATTTTATGTTCCTT
ATAAAGAAGCTAATGTCCACGACTTTGAACTTCGAAAAATCCCAGTAATG
TCCGAAGGGGCTAATCTTCCGAAAGACGACATAACCTTCTATTTGGAGCA
TCAGGTTAAGCGAATTGTATCCCAAGCCACCGTCAACTACTCTGAGTCGC
TAGCAAAATCTACCTGCTGGCTCAGTCAAGATGAAGAAAGGAAGGTTGTC
CGAGCTCTTGCCGATAAAAGCGATGGTTTGTTCATTTATGCAGCCACCGC
ATGCCGCTTTTTGGATGGGGTAGACTGCGACTTCGACGATTTGCAAGCAC
GCATGCGAGAAATATCTGGTTACAGCTCAGAAGTAGATTCACCACAGGAC
AATTTGGATCAGATGTACAACCAAATCCTAAAATACTCTATAATGTATAG
CTCGAGAAAAATAAAGAGCGAGAAGAAAGATTTCTATGAGCTCTTTGAAC
GAATGATCGGAGCTGTTGTTGTACTAGCAGAGCCTCTCACGATCGCGACC
CTCGAAGACCTCTTGGATTTTGCTGGAAAGGAAACCAAAACTCGAAGACT
TTTGAACAGTTTAAGCTCTGTCATATCTTGTGGGGTCAGTTTTGGATCAC
CTATTCAATTGCTACACATGTCTTTTCGCGACTTTCTCGTTGGCCAACCC
AACAGGAGATGTCTCTACGATGAATTCTGCATTGACCCAAGAAAGGCCCA
TAGGGCCCTTTTCGAGAGTTGCTTAAAGCTGCTGTCGAGTACTCTGAAGC
AAGACATTTGTTCTCTTGAGGACCCATCCTTCCTGGCCAAAGATATTGGT
TCATCTTTGCTGGACCGACATGTTCGAGTTTCCGTCAGATATGCTTCTCA
ATATTGGTCGCATCATCTCCAACAAGCTGGAGTCAAGCTACTTGATAATG
ACTGCGTACATGAGTTTCTCCAGAAGCATTTTCTGTGTTGGCTCGAGGTC
ATGAGCCTTCTTCAAATGATACCGACAGCTATTGTTAACACCATCCAGCT
TGAAAGTTACTTTGCGTCCCTACCGGTAGGTATCAAATAAATGCATTTCC
GAAAGCGCCTGAAAGACTGGACGGCGACTCTCCGTCCGCCAAGAAACTCC
GGTCTTGATGTTTCTCAAGATACAAGTACTGCATCGGTGGTGTCATCGCA
AAACAATGATATCTCAGTCCCTCATGCTTGCCCTTCGAACGTTCCCAATC
CTATCCCTTTAAGGCTCGAAGGGCTGTGGAAGAAAGCTTACTCGGACCTC
CAAAATAAGAACCCTGACCTACTTGCCCAGTATGAAAAGATCCTCCTGTC
GAACGCGGAATTGGATGACTCGAGCAATGAGAACCAAGGAGACAATATTG
ACATTGATCCTCGACTTGAGACTTGCGTAAAAAGGCGTCTTGAAGCGATC
GAAAAGTTACGGTGCAAGATACGCATTGGAGGAAAAGAAATAGAAGTCAA
GAAGCAAGTCCGTCGTGTTGTAGGGGGGATACTGTCCGTAAAAGATATCA
TTACCGCGGCAGTGAGTGCGGAGCCACATGTCTCCATAGCATGGGCAGGC
GTTTTGTTTTTACTGTATCCGTTGGCCAAATCATTTGATCAGGATGAGGA
TGCTATGAACGGTTTTCAAGCTGTATCAGACCTTATGGTTCGGTATGCAT
TCCTGGAGAGAAGTCAGGCCAAAATATACTCGAATTCCAGCTTCACGGTA
GCCGACCCGGGTCATGATTTTGCTAATTTAATCAGATCCAAAACGGTTGA
GCTGTACGTTCTTATACTTGAGTACCACATGTCTCTTGCCACGCACTTCG
ATCATGCCGGGTTCAGGCGATTCTTACACGACTGGACAGAGATCGATAAG
TGGCACAGCATGCTAAAGTCGATCACGAGTCTCGATGAGAGCATTGGTCA
GTATTTGGCAACATTCGCTGGAGATGATATCCAAAAGATCCTCAAGGAAC
TGGAGAATTCACAACGGGTTGTAATGGACTCACTCTCTGTGATAAAGGAA
AATGTTGAGGAGACTAAACAAATAGAGCTTCTCAAATTGCTTCCGCTGGT
CGGAGAGGCAACGTTTGGGTCCCTTGCTGATCAAAACAAACCAGAATGCC
TCGAGGGCACCCAGACGAAAATACTTCGTGAGATTCAGACTTGGATTGAG
TCTCCGGATGACTCTCAGATATTCTGGCTCAGAGGAATGGCAGGAACCGG
CAAATCTACAATCTCTCGTACCCTTGCTGCTGCGTGCCAGCAAGGCAAAT
CACTTATTCCCAACGGGCCCCCTCTTCCCGTGAACGTCTGTCTCGGTGCC
AGTTTCTTCTTTGATCGAACTAAGCCGGGGCGCAACTCCGTTGAGAAGTT
GTTTCCTTCCATATCCAATAAGCTAGCATATTCATTCCCAGATTCTAGAG
ACAAGATATGCCAAGCAATTCTGGACAACCAATCCATCGGCAATCAAAAT
TTGCATAACCAATGGAGCAAATTGATTTCAGAGCCACTTTTGACACTCGA
TAAGGAACTTCTCCTACCCGTGACACTGGTATTGGTGCTAGATGCACTTG
ACGAGTCTGTGTCTCAGGACCCCAAGGAGGCTGGAGAACCAGCCCATGAT
ATTGGAGGCGTCCTAACGCTTATAACCACAGCAGAAAAGTTGCAAAATAT
TCGACTGAAAATATTCCTTACCAGCAGGCCAGAACTACGGTCTCAATTTT
ATGTTCCTTATAAAGAAGCTAATGTCCACGACTTTGAACTTCGAAAAATC
CCAGTAATGTCCGAAGGGGCTAATCTTCCGAAAGACGACATAACCTTCTA
TTTGGAGCATCAGGTTAAGCGAATTGTATCCCAAGCCACCGTCAACTACT
CTGAGTCGCTAGCAAAATCTACCTGCTGGCTCAGTCAAGATGAAGAAAGG
AAGGTTGTCCGAGCTCTTGCCGATAAAAGCGATGGTTTGTTCATTTATGC
AGCCACCGCATGCCGCTTTTTGGATGGGGTAGACTGCGACTTCGACGATT
TGCAAGCACGCATGCGAGAAATATCTGGTTACAGCTCAGAAGTAGATTCA
CCACAGGACAATTTGGATCAGATGTACAACCAAATCCTAAAATACTCTAT
AATGTATAGCTCGAGAAAAATAAAGAGCGAGAAGAAAGATTTCTATGAGC
TCTTTGAACGAATGATCGGAGCTGTTGTTGTACTAGCAGAGCCTCTCACG
ATCGCGACCCTCGAAGACCTCTTGGATTTTGCTGGAAAGGAAACCAAAAC
TCGAAGACTTTTGAACAGTTTAAGCTCTGTCATATCTTGTGGGGTCAGTT
TTGGATCACCTATTCAATTGCTACACATGTCTTTTCGCGACTTTCTCGTT
GGCCAACCCAACAGGAGATGTCTCTACGATGAATTCTGCATTGACCCAAG
AAAGGCCCATAGGGCCCTTTTCGAGAGTTGCTTAAAGCTGCTGTCGAGTA
CTCTGAAGCAAGACATTTGTTCTCTTGAGGACCCATCCTTCCTGGCCAAA
GATATTGGTTCATCTTTGCTGGACCGACATGTTCGAGTTTCCGTCAGATA
TGCTTCTCAATATTGGTCGCATCATCTCCAACAAGCTGGAGTCAAGCTAC
TTGATAATGACTGCGTACATGAGTTTCTCCAGAAGCATTTTCTGTGTTGG
CTCGAGGTCATGAGCCTTCTTCAAATGATACCGACAGCTATTGTTAACAC
CATCCAGCTTGAAAGTTACTTTGCGTCCCTACCGGTAGGTATCAAATAAA
TGCATTTCCGAAAGCGCCTGAAAGACTGGACGGCGACTCTCCGTCCGCCA
AGAAACTCCGGTCTTGATGTTTCTCAAGATACAAGTACTGCATCGGTGGT
GTCATCGCAAAACAATGATATCTCAGTCCCTCATGCTTGCCCTTCGAACG
TTCCCAATCCTATCCCTTTAAGGCTCGAAGGGCTGTGGAAGAAAGCTTAC
TCGGACCTCCAAAATAAGAACCCTGACCTACTTGCCCAGTATGAAAAGAT
CCTCCTGTCGAACGCGGAATTGGATGACTCGAGCAATGAGAACCAAGGAG
ACAATATTGACATTGATCCTCGACTTGAGACTTGCGTAAAAAGGCGTCTT
GAAGCGATCGAAAAGTTACGGTGCAAGATACGCATTGGAGGAAAAGAAAT
AGAAGTCAAGAAGCAAGTCCGTCGTGTTGTAGGGGGGATACTGTCCGTAA
AAGATATCATTACCGCGGCAGTGAGTGCGGAGCCACATGTCTCCATAGCA
TGGGCAGGCGTTTTGTTTTTACTGTATCCGTTGGCCAAATCATTTGATCA
GGATGAGGATGCTATGAACGGTTTTCAAGCTGTATCAGACCTTATGGTTC
GGTATGCATTCCTGGAGAGAAGTCAGGCCAAAATATACTCGAATTCCAGC
TTCACGGTAGCCGACCCGGGTCATGATTTTGCTAATTTAATCAGATCCAA
AACGGTTGAGCTGTACGTTCTTATACTTGAGTACCACATGTCTCTTGCCA
CGCACTTCGATCATGCCGGGTTCAGGCGATTCTTACACGACTGGACAGAG
ATCGATAAGTGGCACAGCATGCTAAAGTCGATCACGAGTCTCGATGAGAG
CATTGGTCAGTATTTGGCAACATTCGCTGGAGATGATATCCAAAAGATCC
TCAAGGAACTGGAGAATTCACAACGGGTTGTAATGGACTCACTCTCTGTG
ATAAAGGAAAATGTTGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031359 |
| DBxref | PFAM:PF17100 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4322523..4325292 - |
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