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KJC3_004256-T1, KJC3_004256-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004256-T1
Unique NameKJC3_004256-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4348226..4349470-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004256-T1 ID=KJC3_004256-T1|Name=KJC3_004256-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1245bp|location=Sequence derived from alignment at ch3:4348226..4349470- (Aspergillus niger KJC3)
GTCAAGAGCTCCCTACGGTCCTCGTCTCACTCCCTATCTTCTGCTCCTCT
CCTCTTCGGGGCCCCCGTCGCTTGTTTTCTTGATATCCTTCAGCACTCAG
GTAGTGCCGTAAGCCGGGGTTTCATCATGGGTCTCCTCTATCCTGCCGGT
GTTGTAATCGTGGCCGCAGCGGTGGTCGGACTGTGTAAGGAAACCCCATC
ATTCTGGCGCAGTGGGCTTCATCAAGATACTAATTTGGCTTGTTTCCATG
ATTAGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACGTACGCCACA
AATCCCTACGACTACGATGAGCAGTGAACACCCGCTAATTCGATCTAGAT
CGGCTACTTCCTCGAGTCGGTGTCTCCGTATGCCTGGGCGAACTTTGGGA
TTGCTATGTGCATTGGCTTATCGGTGGTTGGTGCCGCATGGTATGGCTTT
ACGAGTTCCGCTTGTGTCATTGGGAACGAAATACTGACTTTGTTCCCATC
AGGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAGGTGTCAAAGC
ACCCAGAATCCGTACCAAGAACTTGATTTCGATTATTTTCTGTGAAGTCG
TGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTCCTCCAAGCTCAAC
CTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACTACACCGGATA
TGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAACCTGATTTGCG
GTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGCCGATGCTGCT
GACCCTAGCTTGTTCGTCAGCCCCTTCTCTCGATTAACGGAGTGAACGCT
AACAATATGCACGATAGGTTCGTCAAGATCCTTGTTATCGAAATCTTCAG
CTCTGTTCTCGGCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAA
AGGCACTTGACTTTGGAGCTGCCTGAAGAATGCTGCTGGTGGAGGTGTAG
AGGGCCATGATGGGGATGATCTGTACGACCTATATCATTCTTGTCTTCAC
TTTTCTGTTATTTGTCCTATTTATAGGCCGCATTGGGCGCATGGATTCGA
TTTGACTGTAGACCGGTTGGCTATGCGTGAATTGCATTGATAGTCTTGCT
TTTGTTGCTTTGCCTGATGGGGAAAGAAGAGGAGGAAAGGTGTACAGTAA
TTGTTAGGAGATAACATAGGAACTTTTACAAAACCAAGATAAATA
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Coding sequence (CDS) from alignment at ch3:4348226..4349470-

>KJC3_004256-T1 ID=KJC3_004256-T1|Name=KJC3_004256-T1|organism=Aspergillus niger KJC3|type=CDS|length=3015bp|location=Sequence derived from alignment at ch3:4348226..4349470- (Aspergillus niger KJC3)
GTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCCTTT
TCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTTGGA
GCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAGGTG
TCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATTTTCTGT
GAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTCCTCCAA
GCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACTACA
CCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAACCTG
ATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGCCGA
TGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGTGTCTCCGTA
TGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGGTGGTTG
GTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACATGGG
TCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGTCGGAC
TGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCGGCC
TTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGACTTT
GGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTGGAG
GTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATTTTC
TGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTCCTC
CAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACTACT
ACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGCAAC
CTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCTGGC
CGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGTGTCTCC
GTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGGTGG
TTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAACAT
GGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGGTCG
GACTGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTCTCG
GCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTTGAC
TTTGGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTGGTG
GAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATTATT
TTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTTCTC
CTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCAACT
ACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCCTGC
AACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGCCCT
GGCCGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGTGTC
TCCGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTATCGG
TGGTTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGATTAA
CATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGGTGG
TCGGACTGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTGTTC
TCGGCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCACTT
GACTTTGGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCGTTG
GTGGAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCGATT
ATTTTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGTCTT
CTCCTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCAGCA
ACTACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGCGCC
TGCAACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGCGGC
CCTGGCCGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTCGGT
GTCTCCGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCTTAT
CGGTGGTTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACAGAT
TAACATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAGCGG
TGGTCGGACTGTGTTCGTCAAGATCCTTGTTATCGAAATCTTCAGCTCTG
TTCTCGGCCTTTTCGGATTGATTGTTGGGCTTCTGGTCGGAGGAAAGGCA
CTTGACTTTGGAGCTGCCTGAGGGTATCTTCTTGACCGGCTCCTCGATCG
TTGGTGGAGGTGTCAAAGCACCCAGAATCCGTACCAAGAACTTGATTTCG
ATTATTTTCTGTGAAGTCGTGGCTATCTATGGTGTTATTATGGCTATCGT
CTTCTCCTCCAAGCTCAACCTCGTCGAAGGCGATGAGGCCTTCTCTGGCA
GCAACTACTACACCGGATATGCGCTGTTCTGGGGCGGTATCACTGTGGGC
GCCTGCAACCTGATTTGCGGTATCTCCGTCGGTATTAACGGAAGTGGTGC
GGCCCTGGCCGATGCTGCTGACCCTAGCTTATCGGCTACTTCCTCGAGTC
GGTGTCTCCGTATGCCTGGGCGAACTTTGGGATTGCTATGTGCATTGGCT
TATCGGTGGTTGGTGCCGCATGACTACCTCTTCCGCGGCGAAGGCGAACA
GATTAACATGGGTCTCCTCTATCCTGCCGGTGTTGTAATCGTGGCCGCAG
CGGTGGTCGGACTGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA16KJC3_004256Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004256-T1KJC3_004256-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004256-T1.cdsKJC3_004256-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004256-T1.utr3p1KJC3_004256-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004256-T1.exon5KJC3_004256-T1.exon5Aspergillus niger KJC3exon
KJC3_004256-T1.exon4KJC3_004256-T1.exon4Aspergillus niger KJC3exon
KJC3_004256-T1.exon3KJC3_004256-T1.exon3Aspergillus niger KJC3exon
KJC3_004256-T1.exon2KJC3_004256-T1.exon2Aspergillus niger KJC3exon
KJC3_004256-T1.exon1KJC3_004256-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004256-T1.utr5p1KJC3_004256-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265G5C
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c''
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4348226..4349470 -
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