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KJC3_004260-T2, KJC3_004260-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004260-T2
Unique NameKJC3_004260-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4360186..4361523+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004260-T2 ID=KJC3_004260-T2|Name=KJC3_004260-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1338bp|location=Sequence derived from alignment at ch3:4360186..4361523+ (Aspergillus niger KJC3)
AAAGTTGCAAAAAACCCGACACCCCGCAAAGCACACAGCCATTGCTGCGT
CGACTTCCGTTTATTATACCCCGAATTTTCTAATTATTCTCCCACGATCC
CTCAACCCATGAACACATTCTTATAATTAAACCCCACCCCAATCTACCCA
CCATGGACCCCTCCGACGACCCCGTCATCGCCTCCTACGACATCTGCCTC
ACCGACTCAGAAATCTCCCGCTACGTCCTGCAATACCTCGACCGACCCGC
CGGCTCCTCCTACGACGACCGCCACGGCCAAAAACCCACCTCCTTCCGCC
TGAAACCCAAGACGGGTCTTGTGGAAGTCGACGTTCCCATCAACACGCGG
GTAAATTACGATGTCAGCAAGGGATTGCGCTACGGTGATGCATTGAAGAA
GAGTCGGAGTGCGCGCGAAGGCGGCGCGTTCGGTATGGCGGGTGGGTTTA
GTTCCGGTGGTGCTGGCGGTGGAGCGCCGGCGAAGGTGAAGATGGAGGAA
GCGGCGGATGCGAAGAGCGAGACGGCGTCGTTGATGAGGGTGCAAACTCT
GGGAGGGCGGATCAAGAGTCCCGAGGATGGGGATCCGGTTTACATGTTGG
CGGCTTTTAGGGGGGGTGAGTTTTTCCCTTCCCTTCTCTTTGTTGGTTGT
TGGAGTCGGGGGAAAAGGGCTAATGTGTGTGATTTTGGTGGGAACAGATA
AATTGCATCTTTCGCCTGTTTCGGCTGTTGTACAACTACACCCGCAACTT
CATCATTTGGATGCTTTGGATGAGATGCCGACTAAGGGCAAGGGGAAGGC
GAGGAAGGAAGGCGAGGAGGATCGTCCCGGCGAGAGCGAGGCTAGGGCTA
TTGATGTAAAGATCAAGGCCGCGGAGGATGGAGAGGCGGCGCAGGTTGCG
GGCAATCTGGATCTTTTGAAGAAGATGCAGGATGAGAAGTGGAAGGATTA
TGAGTGGGTTGATGCTGAGGTGAGTGTTATGCTGTTGGATTCCTTAGGCT
CAAGGGAATGTTTTGCTAATGTGTTTGTTTTGTTTCGCAGACTGAGGAAT
CGTGGCAATTGTACGAAAACTACATGATGCATCAGGATGTGGATAGTCTT
CCGCAGCTGCAGTCGGCGATTGATAGTGAAAGTTATCTGGATACGATGAG
TGCGCCGCGGATTGATCCTGCACGACCGGAGATGACGGGTTGGGCTATGA
AACAGAACCGGATGAAGCAGCGGGAAGAACAGCAGTCTGCTCAGGGGACA
ACGGAGCAAGGGTGATTAGCTGCTTTGGTCGGGGATATACGATATGCAAA
ATTACGAATGTTGAATGACTTGCACATAAGCTTGGAAG
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Coding sequence (CDS) from alignment at ch3:4360186..4361523+

>KJC3_004260-T2 ID=KJC3_004260-T2|Name=KJC3_004260-T2|organism=Aspergillus niger KJC3|type=CDS|length=1686bp|location=Sequence derived from alignment at ch3:4360186..4361523+ (Aspergillus niger KJC3)
ATGGACCCCTCCGACGACCCCGTCATCGCCTCCTACGACATCTGCCTCAC
CGACTCAGAAATCTCCCGCTACGTCCTGCAATACCTCGACCGACCCGCCG
GCTCCTCCTACGACGACCGCCACGGCCAAAAACCCACCTCCTTCCGCCTG
AAACCCAAGACGGGTCTTGTGGAAGTCGACGTTCCCATCAACACGCGGGT
AAATTACGATGTCAGCAAGGGATTGCGCTACGGTGATGCATTGAAGAAGA
GTCGGAGTGCGCGCGAAGGCGGCGCGTTCGGTATGGCGGGTGGGTTTAGT
TCCGGTGGTGCTGGCGGTGGAGCGCCGGCGAAGGTGAAGATGGAGGAAGC
GGCGGATGCGAAGAGCGAGACGGCGTCGTTGATGAGGGTGCAAACTCTGG
GAGGGCGGATCAAGAGTCCCGAGGATGGGGATCCGGTTTACATGTTGGCG
GCTTTTAGGGGGGATAAATTGCATCTTTCGCCTGTTTCGGCTGTTGTACA
ACTACACCCGCAACTTCATCATTTGGATGCTTTGGATGAGATGCCGACTA
AGGGCAAGGGGAAGGCGAGGAAGGAAGGCGAGGAGGATCGTCCCGGCGAG
AGCGAGGCTAGGGCTATTGATGTAAAGATCAAGGCCGCGGAGGATGGAGA
GGCGGCGCAGGTTGCGGGCAATCTGGATCTTTTGAAGAAGATGCAGGATG
AGAAGTGGAAGGATTATGAGTGGGTTGATGCTGAGGTGAGTGTTATGCTG
TTGGATTCCTTAGGCTCAAGGGAATGTTTTGCTAATGTGTTTGTTTTGTT
TCGCAGACTGAGGAATCGTGGCAATTGTACGAAAACTACATGAATGGACC
CCTCCGACGACCCCGTCATCGCCTCCTACGACATCTGCCTCACCGACTCA
GAAATCTCCCGCTACGTCCTGCAATACCTCGACCGACCCGCCGGCTCCTC
CTACGACGACCGCCACGGCCAAAAACCCACCTCCTTCCGCCTGAAACCCA
AGACGGGTCTTGTGGAAGTCGACGTTCCCATCAACACGCGGGTAAATTAC
GATGTCAGCAAGGGATTGCGCTACGGTGATGCATTGAAGAAGAGTCGGAG
TGCGCGCGAAGGCGGCGCGTTCGGTATGGCGGGTGGGTTTAGTTCCGGTG
GTGCTGGCGGTGGAGCGCCGGCGAAGGTGAAGATGGAGGAAGCGGCGGAT
GCGAAGAGCGAGACGGCGTCGTTGATGAGGGTGCAAACTCTGGGAGGGCG
GATCAAGAGTCCCGAGGATGGGGATCCGGTTTACATGTTGGCGGCTTTTA
GGGGGGATAAATTGCATCTTTCGCCTGTTTCGGCTGTTGTACAACTACAC
CCGCAACTTCATCATTTGGATGCTTTGGATGAGATGCCGACTAAGGGCAA
GGGGAAGGCGAGGAAGGAAGGCGAGGAGGATCGTCCCGGCGAGAGCGAGG
CTAGGGCTATTGATGTAAAGATCAAGGCCGCGGAGGATGGAGAGGCGGCG
CAGGTTGCGGGCAATCTGGATCTTTTGAAGAAGATGCAGGATGAGAAGTG
GAAGGATTATGAGTGGGTTGATGCTGAGGTGAGTGTTATGCTGTTGGATT
CCTTAGGCTCAAGGGAATGTTTTGCTAATGTGTTTGTTTTGTTTCGCAGA
CTGAGGAATCGTGGCAATTGTACGAAAACTACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004260KJC3_004260Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004260-T2.utr5p1KJC3_004260-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004260-T2.exon1KJC3_004260-T2.exon1Aspergillus niger KJC3exon
KJC3_004260-T2.exon2KJC3_004260-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004260-T2.cdsKJC3_004260-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004260-T2.utr3p1KJC3_004260-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004260-T2KJC3_004260-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006886
DBxrefPFAM:PF04801
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4360186..4361523 +
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