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KJC3_004264-T1, KJC3_004264-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004264-T1
Unique NameKJC3_004264-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4377570..4379171-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004264-T1 ID=KJC3_004264-T1|Name=KJC3_004264-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1602bp|location=Sequence derived from alignment at ch3:4377570..4379171- (Aspergillus niger KJC3)
ATGGGCTCCAAAACCCTAGGCCTGAGGAAGTACTCACCGCGGTCTCGAAC
AGGTTGCCGCACATGTCGAACACGACGTATCAAATGCGATGAGACACCGG
GACCAGCATGCAAGAACTGCACGTCGACAGGTCGTACGTGCGACCGATCC
CCGGTATTCCAGCTCCCTGTAAAAACGCGCCTCCGACACGCTAGTCTTCT
GCACACGCACATTTCCACTAATGTGCCCGGTATGACAACCGACGAACGCC
GCTGTCTCGCCTTATTTCAAACATATACGATGCCCATGCTGATCGGGGTA
TGTGACTCGGAACTCTGGCAACGCCTCGTGCTACAGATGAGTCAGACGGA
GCCGGCGGTTGGACACGCTGTTGCAGCGTTGGGGGCATTCCACGAAACTA
CAACTGGAAGTGTTACCGGAACAGAAGTAGTAGGTGGCAATAACGATTAT
CGGCTCTTTGCACTTGAGCAATACGGGCGGGCGATTGCGGTTCTTCGTCG
CCGTCTTGCATCCGGGTCCGGGGATCCCCAGCTACGGGTTACGGCGCTGG
TGTGTTGTGTGATCTTTGTGGTTATAGAGTTCTTGCAAGATAACTACAGG
GAGGTGTTGGTGCATCTGAAAAATGGGACGTACATTCTTATGAATCAGAC
TGGTCCGAGAGCAAGGGAAGCAATGTTCAAAGCCATCTCCGCTGGTACGA
ATGACGGTAGCAAGCCAGAAGAGGACGCGGTGTTCATGCAGATGTTTGCA
CAATTGGCAGTCCAGGCAGCGCACTTTAACAATGATTCCGTGATGAGGTT
GCAACCATCGGATACGCATCTCTCCAGCGTGCAGTACGATAAATTAGAAA
TACGCAGTCTGAGGGAAGCAAAGGAAAGGTTGGACCCGTTGATCGATAGC
ATGGTGCGCTTCTGGACGCGCTGCGAAACAGAACTTCGTCTTCGAGATCG
CTCTGCAGACCATCGTCCTCTCTACGTGGAGCAACAACAGCAATACAGTA
ACATGCAACGCCATATCAACGCCTTTGAGACATACGTCGCCCAGGCCCAA
TACTTTACACCCAAAGAGGTTCGGGCTATTGATACGATCCGCGTCAGTCA
CATCGTCATGAGTACCTACATAGCCACCTTTTTGGATCTCTCCGAAACCA
TCTACGACCGATACTTAGCAGGATGGTCGCGAGCCGTGACCCTAGCAGAG
CAGATCGTCGCCAGCCTTCAGGCGGAATACGCCCACAAGCAACAGCCACT
CCCCAACGTCATCTCCGATATCGGTGTCTTCGTCCCACTGTTTTCGGTAG
GAATCAAGTGCCGCAATGTGGGTATCCGAGAGCGTGTGCTGAAACTGTTC
CGCGCATGGCCTCATCGCGAAGGACTACATGATTCGATGTCATACTTATA
TATGGTCCGGGAAATAGCGAAGATGGAAAGGGAGGCAGCCGATGCTGATG
GGTATGTACCGGAGAAGGCGAGAGTGCGAACAATGATGTTCGAGAGGGCG
GGAGATGGAAAGCATGCGGTGCTACATTACGCGTTATCGGATCCAGAGGC
GAGGGCATTGGTGATGCGGAAAAGGGTGATTTTGATGGATGAAGTGATGT
AG
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Coding sequence (CDS) from alignment at ch3:4377570..4379171-

>KJC3_004264-T1 ID=KJC3_004264-T1|Name=KJC3_004264-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch3:4377570..4379171- (Aspergillus niger KJC3)
ATGGGCTCCAAAACCCTAGGCCTGAGGAAGTACTCACCGCGGTCTCGAAC
AGGTTGCCGCACATGTCGAACACGACGTATCAAATGCGATGAGACACCGG
GACCAGCATGCAAGAACTGCACGTCGACAGGTCGTACGTGCGACCGATCC
CCGGTATTCCAGCTCCCTGTAAAAACGCGCCTCCGACACGCTAGTCTTCT
GCACACGCACATTTCCACTAATGTGCCCGGTATGACAACCGACGAACGCC
GCTGTCTCGCCTTATTTCAAACATATACGATGCCCATGCTGATCGGGGTA
TGTGACTCGGAACTCTGGCAACGCCTCGTGCTACAGATGAGTCAGACGGA
GCCGGCGGTTGGACACGCTGTTGCAGCGTTGGGGGCATTCCACGAAACTA
CAACTGGAAGTGTTACCGGAACAGAAGTAGTAGGTGGCAATAACGATTAT
CGGCTCTTTGCACTTGAGCAATACGGGCGGGCGATTGCGGTTCTTCGTCG
CCGTCTTGCATCCGGGTCCGGGGATCCCCAGCTACGGGTTACGGCGCTGG
TGTGTTGTGTGATCTTTGTGGTTATAGAGTTCTTGCAAGATAACTACAGG
GAGGTGTTGGTGCATCTGAAAAATGGGACGTACATTCTTATGAATCAGAC
TGGTCCGAGAGCAAGGGAAGCAATGTTCAAAGCCATCTCCGCTGGTACGA
ATGACGGTAGCAAGCCAGAAGAGGACGCGGTGTTCATGCAGATGTTTGCA
CAATTGGCAGTCCAGGCAGCGCACTTTAACAATGATTCCGTGATGAGGTT
GCAACCATCGGATACGCATCTCTCCAGCGTGCAGTACGATAAATTAGAAA
TACGCAGTCTGAGGGAAGCAAAGGAAAGGTTGGACCCGTTGATCGATAGC
ATGGTGCGCTTCTGGACGCGCTGCGAAACAGAACTTCGTCTTCGAGATCG
CTCTGCAGACCATCGTCCTCTCTACGTGGAGCAACAACAGCAATACAGTA
ACATGCAACGCCATATCAACGCCTTTGAGACATACGTCGCCCAGGCCCAA
TACTTTACACCCAAAGAGGTTCGGGCTATTGATACGATCCGCGTCAGTCA
CATCGTCATGAGTACCTACATAGCCACCTTTTTGGATCTCTCCGAAACCA
TCTACGACCGATACTTAGCAGGATGGTCGCGAGCCGTGACCCTAGCAGAG
CAGATCGTCGCCAGCCTTCAGGCGGAATACGCCCACAAGCAACAGCCACT
CCCCAACGTCATCTCCGATATCGGTGTCTTCGTCCCACTGTTTTCGGTAG
GAATCAAGTGCCGCAATGTGGGTATCCGAGAGCGTGTGCTGAAACTGTTC
CGCGCATGGCCTCATCGCGAAGGACTACATGATTCGATGTCATACTTATA
TATGGTCCGGGAAATAGCGAAGATGGAAAGGGAGGCAGCCGATGCTGATG
GGTATGTACCGGAGAAGGCGAGAGTGCGAACAATGATGTTCGAGAGGGCG
GGAGATGGAAAGCATGCGGTGCTACATTACGCGTTATCGGATCCAGAGGC
GAGGGCATTGGTGATGCGGAAAAGGGTGATTTTGATGGATGAAGTGATGT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004264KJC3_004264Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004264-T1.cdsKJC3_004264-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004264-T1.exon1KJC3_004264-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004264-T1KJC3_004264-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4377570..4379171 -
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