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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4392142..4395186- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004271-T1 ID=KJC3_004271-T1|Name=KJC3_004271-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3045bp|location=Sequence derived from alignment at ch3:4392142..4395186- (Aspergillus niger KJC3)
ATCCTCCCTCTCCATATCCATACATACACTCCTCACTTCATATTCCAATA
ATGTTTAATTGACCATAATCATCATCCTAACCAGCGACAAAGATGCCCCG
CAACCTACCATGGCTACTCAATGCAGCAACAACAACCAAACGAGAACCGA
AGACATCTCCGTCAGACACACCGCGTCGAACCGTGAAGCGCGAGACCAGA
GCCAAAGAGAAGGAGAAAGAAGAAGATGACAACGATGTGACTCCAAAAGC
CGAGATGGCGATGACTCCAGGTTCAAGGATGAAGAAGCGCGATTTTATGC
GGTCTTGTATGTACCTTTTACTCTAACCGTTGCTTTTCGTTTTTGCAATA
TGAGTATACTGAGGTCCACTGACGCCTTGCTATAGCTCCTACGCCGCCGT
CCTCTCCCATCCATCGCTGTCCGTCTGAAGAGTACGTGATCATACCATAG
CTACACACACCTATGAAAAAACGCAGTACGCTGACAGCATGTGAAGATAC
CTCCGCGAAGGCTTCGACAACGACGACATATACATGATGGTAGAAGACGA
GTTCTACGCGGTCGCACAAACCTTCACACAACACCTACACTACGCAGAAT
ACATACGACGGAAGAAAGAAGCCAAGTTGCAGAATGCCACGACCATACAG
AATATCGCTCGACCGACCGATGGTGTTACTGCGCAGAGCGAGGAAGCTAA
ACGCAAGGCTGCGGCGGAGGATTTGTCCGCTCAGCAGAAGGAGGGGCTGC
AGAAGATGGTGGAAGGTGGACGACCTGCTGTGGATTCGGAAGAAGATGAT
CAGGAGGAAGAGGAAGATGATACTTGGGCGGGTACGTCGCTGCATGATCT
GCTGATTAGCCCCCGAAAGGCGCGGTCGTTGGTCGGGATGCAGGGCATCA
AGTCGACGACGCGGGCGGCTGCTGGACTGCGGGCGTCAGCAGGAAGCAGC
GCGGTTACAGATGGGGCAGCAAGGGAGCGACAGGATGCGATGGGGGACGG
CGATCAACTAAGTGAAACGACGGATGACGACGATCTGGACGCACGGACGA
GGACCCTGACGGGACCGAGTCGTATACAGCATCGTACTACGGAGACTACG
CCTACTGCTGCTAGCTCGCGAAGCAGCCCGATGAATAATCGCTCTACCGG
GGACAATGGAATCAGAAGAGTGCAGTCTATGAGTAGTAGATACAGTACAC
CGAGGGCGACCAAATCCAAGAAGAGATTAATATTCGATGATGACTTTGAC
GGGCTTCCAGAGCCGTCTCGGTCAAGCAATCAGATGCAGGGCCCGATATC
ATCCCCGTCACTAGGTCGAAGAGCACCAAATCCACGAGGCCCGGACCCCA
AGGCAAAGAAATCGCGTCTCAATGAAGTTCCAACATTCTTGTTTTGACGT
TGCAGACCGTGAATCACGCTGAGAGGAGAATTTACGATGAATTTCCATGC
TTCCGTAACGAGATAAACTGTCGATGATGTTGATATGCAACCGGCATGTA
CAGCTGGCATCGATTTGATCGGCTCATTGCTCATCGTGGGCATCAGAAAC
TGGTCTCGCAACCCGGACGCTCAGCCTCCGGACATGCGTCTTGATCTTGT
CTCGTGTCGATGGTTGACGTTCCATGGCGGTGGCCGCCGCTTCCTTCTCC
TTCTCTAGGGTGGAACCCCGACTGTGCAAGGTTGCCGCACTGCAGTGATG
TTAGACTGGATAGCAGAATAGTCAGGGACGTGAGGTTACTGACTCGTCAT
CAGAGAAGAATGCGGGCAATTCCTCTTTACGAAAGTCGGTTGGGGGTCCC
TAGAGTGCACACTGCATTAGCATATGGGTGGGAGAGACATCATGGGGACA
TGATGGGATGTGTTGGACTCACAATTTCCAGCACCTTCTGCTGCTTCTCG
CGCCGAAAGGGAGACTTGACAAGTCGAGCTATCTGCCGAAAACACTCCAT
AGTGACTTCAGGTGTTTGTTGTTTAGGTGGTGATGATGATTATGATGATG
ATGATGAATCAAGCGAGTGTCGTAAGGTGAGAATGGTGGTAGTGAACGAG
AGATCGAGATCGGTCACTATCTACAAAGGCAGGGACCGATGCCAATTAAG
AAACACAAAAAGCAAAGATAGTGCTAGTTCAAGCAACCAGCAGATCGATC
AACAAAAGTGAGTGGATGCTTCGAAGAGCAGCTTTCTATCAATCACAATC
ACAATGACGAAGATGACGACAATGACGATGTGACACTATGAAACGAGTGA
CAAAGAGTTAAGTATGTAGGGCTTAGTTTTAAAAAACGAGTGGCAACACC
GAAACACGAAACACAAGAAGCGAGCGAGCGAGCGAGCGTGAGAGTAAGTG
AGTGAGAACCAAAAGGAAGGACTAGTCGGCAGAACAAAAAAAGCTCTAGC
AGTGGGACATTGGGCGCATCAAGAAAAGAAAACAATAAAAGAATAAAAAC
AAGGAAGCAGGAATAGAAGACGAAGAAGAAGGACAAGAGAGAAAGAAAAG
ACCGGTCAGAGAAAACAAGTCTAGATATATGGAAACGACGACGAAACACC
CTGCAGGAGAAACTCGATTTCGGCCCTCTTTTCTTTTCTTTTTTATTTTG
GTTTCCCTTTCGCTCGAACCGAACAAACGGTTTTTCGCCCGTGCAAATCT
GAATGCAGGCTTAAGACGGATCGGCGGAATTTTGTGGCACGACAACTATC
TTACGCTAGCTATGCTACCCTTGGATGGGGGAGGAAGTAATATGCAATAT
CCACAGTGACAGCCTTATGTTATGTGCCGGAAACTGATTGGAAGCATTGC
TAGTAAGTAATTGAACTTACGCGCCGCGGGTGACACATTCCCCCTGGCAG
GTCCAGCTCAGTTTACTGACTTTCTTAGTATCCGTCACAGAAGCAAATAT
GCTCCCCGTCCATCCATCCCCTTTCTTAACTGGGGGAAGGAGACGGACTA
GAGGAGTGAGTGACGCGATAATCTCCGAAGAATTGTTGGGCAAATCATAC
AGACATACATACATACATACATACGGTGTGTAGACATTACTTGGC back to topCoding sequence (CDS) from alignment at ch3:4392142..4395186- >KJC3_004271-T1 ID=KJC3_004271-T1|Name=KJC3_004271-T1|organism=Aspergillus niger KJC3|type=CDS|length=3483bp|location=Sequence derived from alignment at ch3:4392142..4395186- (Aspergillus niger KJC3)
ATACCTCCGCGAAGGCTTCGACAACGACGACATATACATGATGGTAGAAG
ACGAGTTCTACGCGGTCGCACAAACCTTCACACAACACCTACACTACGCA
GAATACATACGACGGAAGAAAGAAGCCAAGTTGCAGAATGCCACGACCAT
ACAGAATATCGCTCGACCGACCGATGGTGTTACTGCGCAGAGCGAGGAAG
CTAAACGCAAGGCTGCGGCGGAGGATTTGTCCGCTCAGCAGAAGGAGGGG
CTGCAGAAGATGGTGGAAGGTGGACGACCTGCTGTGGATTCGGAAGAAGA
TGATCAGGAGGAAGAGGAAGATGATACTTGGGCGGGTACGTCGCTGCATG
ATCTGCTGATTAGCCCCCGAAAGGCGCGGTCGTTGGTCGGGATGCAGGGC
ATCAAGTCGACGACGCGGGCGGCTGCTGGACTGCGGGCGTCAGCAGGAAG
CAGCGCGGTTACAGATGGGGCAGCAAGGGAGCGACAGGATGCGATGGGGG
ACGGCGATCAACTAAGTGAAACGACGGATGACGACGATCTGGACGCACGG
ACGAGGACCCTGACGGGACCGAGTCGTATACAGCATCGTACTACGGAGAC
TACGCCTACTGCTGCTAGCTCGCGAAGCAGCCCGATGAATAATCGCTCTA
CCGGGGACAATGGAATCAGAAGAGTGCAGTCTATGAGTAGTAGATACAGT
ACACCGAGGGCGACCAAATCCAAGAAGAGATTAATATTCGATGATGACTT
TGACGGGCTTCCAGAGCCGTCTCGGTCAAGCAATCAGATGCAGGGCCCGA
TATCATCCCCGTCACTAGGTCGAAGAGCACCAAATCCACGAGGCCCGGAC
CCCAAGGCAAAGAAATCGCGTCTCAATGAAGTTCCAACATTCTTGTTTTG
ACTCCTACGCCGCCGTCCTCTCCCATCCATCGCTGTCCGTCTGAAGAATG
CCCCGCAACCTACCATGGCTACTCAATGCAGCAACAACAACCAAACGAGA
ACCGAAGACATCTCCGTCAGACACACCGCGTCGAACCGTGAAGCGCGAGA
CCAGAGCCAAAGAGAAGGAGAAAGAAGAAGATGACAACGATGTGACTCCA
AAAGCCGAGATGGCGATGACTCCAGGTTCAAGGATGAAGAAGCGCGATTT
TATGCGGTCTTATACCTCCGCGAAGGCTTCGACAACGACGACATATACAT
GATGGTAGAAGACGAGTTCTACGCGGTCGCACAAACCTTCACACAACACC
TACACTACGCAGAATACATACGACGGAAGAAAGAAGCCAAGTTGCAGAAT
GCCACGACCATACAGAATATCGCTCGACCGACCGATGGTGTTACTGCGCA
GAGCGAGGAAGCTAAACGCAAGGCTGCGGCGGAGGATTTGTCCGCTCAGC
AGAAGGAGGGGCTGCAGAAGATGGTGGAAGGTGGACGACCTGCTGTGGAT
TCGGAAGAAGATGATCAGGAGGAAGAGGAAGATGATACTTGGGCGGGTAC
GTCGCTGCATGATCTGCTGATTAGCCCCCGAAAGGCGCGGTCGTTGGTCG
GGATGCAGGGCATCAAGTCGACGACGCGGGCGGCTGCTGGACTGCGGGCG
TCAGCAGGAAGCAGCGCGGTTACAGATGGGGCAGCAAGGGAGCGACAGGA
TGCGATGGGGGACGGCGATCAACTAAGTGAAACGACGGATGACGACGATC
TGGACGCACGGACGAGGACCCTGACGGGACCGAGTCGTATACAGCATCGT
ACTACGGAGACTACGCCTACTGCTGCTAGCTCGCGAAGCAGCCCGATGAA
TAATCGCTCTACCGGGGACAATGGAATCAGAAGAGTGCAGTCTATGAGTA
GTAGATACAGTACACCGAGGGCGACCAAATCCAAGAAGAGATTAATATTC
GATGATGACTTTGACGGGCTTCCAGAGCCGTCTCGGTCAAGCAATCAGAT
GCAGGGCCCGATATCATCCCCGTCACTAGGTCGAAGAGCACCAAATCCAC
GAGGCCCGGACCCCAAGGCAAAGAAATCGCGTCTCAATGAAGTTCCAACA
TTCTTGTTTTGACTCCTACGCCGCCGTCCTCTCCCATCCATCGCTGTCCG
TCTGAAGAATGCCCCGCAACCTACCATGGCTACTCAATGCAGCAACAACA
ACCAAACGAGAACCGAAGACATCTCCGTCAGACACACCGCGTCGAACCGT
GAAGCGCGAGACCAGAGCCAAAGAGAAGGAGAAAGAAGAAGATGACAACG
ATGTGACTCCAAAAGCCGAGATGGCGATGACTCCAGGTTCAAGGATGAAG
AAGCGCGATTTTATGCGGTCTTATACCTCCGCGAAGGCTTCGACAACGAC
GACATATACATGATGGTAGAAGACGAGTTCTACGCGGTCGCACAAACCTT
CACACAACACCTACACTACGCAGAATACATACGACGGAAGAAAGAAGCCA
AGTTGCAGAATGCCACGACCATACAGAATATCGCTCGACCGACCGATGGT
GTTACTGCGCAGAGCGAGGAAGCTAAACGCAAGGCTGCGGCGGAGGATTT
GTCCGCTCAGCAGAAGGAGGGGCTGCAGAAGATGGTGGAAGGTGGACGAC
CTGCTGTGGATTCGGAAGAAGATGATCAGGAGGAAGAGGAAGATGATACT
TGGGCGGGTACGTCGCTGCATGATCTGCTGATTAGCCCCCGAAAGGCGCG
GTCGTTGGTCGGGATGCAGGGCATCAAGTCGACGACGCGGGCGGCTGCTG
GACTGCGGGCGTCAGCAGGAAGCAGCGCGGTTACAGATGGGGCAGCAAGG
GAGCGACAGGATGCGATGGGGGACGGCGATCAACTAAGTGAAACGACGGA
TGACGACGATCTGGACGCACGGACGAGGACCCTGACGGGACCGAGTCGTA
TACAGCATCGTACTACGGAGACTACGCCTACTGCTGCTAGCTCGCGAAGC
AGCCCGATGAATAATCGCTCTACCGGGGACAATGGAATCAGAAGAGTGCA
GTCTATGAGTAGTAGATACAGTACACCGAGGGCGACCAAATCCAAGAAGA
GATTAATATTCGATGATGACTTTGACGGGCTTCCAGAGCCGTCTCGGTCA
AGCAATCAGATGCAGGGCCCGATATCATCCCCGTCACTAGGTCGAAGAGC
ACCAAATCCACGAGGCCCGGACCCCAAGGCAAAGAAATCGCGTCTCAATG
AAGTTCCAACATTCTTGTTTTGACTCCTACGCCGCCGTCCTCTCCCATCC
ATCGCTGTCCGTCTGAAGAATGCCCCGCAACCTACCATGGCTACTCAATG
CAGCAACAACAACCAAACGAGAACCGAAGACATCTCCGTCAGACACACCG
CGTCGAACCGTGAAGCGCGAGACCAGAGCCAAAGAGAAGGAGAAAGAAGA
AGATGACAACGATGTGACTCCAAAAGCCGAGATGGCGATGACTCCAGGTT
CAAGGATGAAGAAGCGCGATTTTATGCGGTCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004271-T1.utr5p1 | KJC3_004271-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4392142..4395186 - |
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