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KJC3_004275-T1, KJC3_004275-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004275-T1
Unique NameKJC3_004275-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4403286..4404885+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004275-T1 ID=KJC3_004275-T1|Name=KJC3_004275-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1600bp|location=Sequence derived from alignment at ch3:4403286..4404885+ (Aspergillus niger KJC3)
CCTCCCCCTTCACCAACCTTTATCAACCTTCCATTACTACCGTTTAAGTA
GCGGGTAGTAGCCAATATGGAAAAACTCCCAACTCAATCCAAAGCCGACA
CTTCCGGCTATGTCGACCTCTCCGAGTCGTCCGTGGCGCGCCCGATCAGC
ACCCGTCGCGACCGGGTCGTTACTCGGCTGGCCGCATGTCTGGGGCTCAT
CACCATCGCCTTCCTAGCTTTATCATGGACCCCTATCTCCATTTCCGGCT
TTAAGCTCTTTTCGTGCCATAGATGGAGAGGACAGCATGATGTTTCATTT
CCCCCTGACTTGGGCAGGGAGGAAGCTCCGTTGATGAATGGTCCACTGCA
TGAACTGTCCACCCTGGACGGGAGCCGCCTAGCCTCGAGTAACAGAATTC
CCCTGGAGGCTCATGTCATGAGTAAATGCCCCGACGCTCGGGATTGTCTC
CAACAGCTTGTCATTCCTGCTATGGAGCAGATCAGCGATAAAGTCGACTT
CAAGCTGTCTTTCATCGCCGCGTATGTAGACTTCCTGTCCTTTCGACCTT
CTAGCTCGGAAAACTGACACTGTGCCCAGAGTATCCAACAAGTCATCAGA
GATCCAATGCATGCACGGTCCCACCGAATGCATCGGTGACATGCTCATCC
TCTGTGCAGCTAATCTGCCTTTCCCGCCTGAGTCCGGTGCCATGTGCTCC
AAGGATGCTCGTACTCCAACAATCCGGTCGCTTGGGTTCGCCAACTGCCT
TATCAGCTCGTATCCCGACATTCCGAAGCGCGACCTGGTTCAGGGATGTG
CCTTGGAGCATGGTATCGACTTTGAGGCTCTTAACAAGTGTGCCAGTCGA
GAATATGATGACCTTGACGACGATGATGATAGCGACGAGAAGACACCGCT
TAGTGGCATTGCTCTGTTGCGCCAGAGTGCATTACATAGCGATAAGCTCA
ACGTCAGGACCAGCTGTACTCTGCGCCTGAATGAATCTACCTGGTGCGTT
CGGGATGGTGGAGTCTGGCGGGACTGCGCCCAGGAAGGAGAGGGCAGCAA
GGTCTCGGTGCTTGTGGACGAGGTGAAGAAGCTGTGGGACAAGGTCAACT
AAGTCCCTGGTATGCTTGGTGAGATACTAATAATGTGCTATGAGTGATGT
GACAGTGTTTCCGTGATGCAAAATGATGCGTGAAGGCAACCTATGCCATA
TATGCAGTATGACATGTCCTTAGCTGAACAGTTTGTATGCCTACTACTTA
ATGATAATCATTATTCTCTTCGTCGCTCGCCCGTGATTTCTACTCCTTCC
TGTTCCACATCGTGGTCTGGCACATTTTCTATAGCCTTTTGTGATCATTT
TATTGCGTTTGCACCCTTCAGTGAGCCCACTCAAGCTGTGACTCTGCAGC
ACTGTGCACTGCCTATGTGTCAGTTCAAACACGAATCTGCCGTACGAGGC
TGACCCGCGCTACGATTCACTATCTGTAAACATTTCTTAGTGTTTATGTT
GTGCGGAACAGATCCGATATCTCTCATTCTTACTTCCCCCTGACCCTCTG
AAATCCTCAGTACACCTTTTCTCTTATTTATCAGCGGGTGTGCATCCCCA
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Coding sequence (CDS) from alignment at ch3:4403286..4404885+

>KJC3_004275-T1 ID=KJC3_004275-T1|Name=KJC3_004275-T1|organism=Aspergillus niger KJC3|type=CDS|length=1956bp|location=Sequence derived from alignment at ch3:4403286..4404885+ (Aspergillus niger KJC3)
ATGGAAAAACTCCCAACTCAATCCAAAGCCGACACTTCCGGCTATGTCGA
CCTCTCCGAGTCGTCCGTGGCGCGCCCGATCAGCACCCGTCGCGACCGGG
TCGTTACTCGGCTGGCCGCATGTCTGGGGCTCATCACCATCGCCTTCCTA
GCTTTATCATGGACCCCTATCTCCATTTCCGGCTTTAAGCTCTTTTCGTG
CCATAGATGGAGAGGACAGCATGATGTTTCATTTCCCCCTGACTTGGGCA
GGGAGGAAGCTCCGTTGATGAATGGTCCACTGCATGAACTGTCCACCCTG
GACGGGAGCCGCCTAGCCTCGAGTAACAGAATTCCCCTGGAGGCTCATGT
CATGAGTAAATGCCCCGACGCTCGGGATTGTCTCCAACAGCTTGTCATTC
CTGCTATGGAGCAGATCAGCGATAAAGTCGACTTCAAGCTGTCTTTCATC
GCCGCAGTATCCAACAAGTCATCAGAGATCCAATGCATGCACGGTCCCAC
CGAATGCATCGGTGACATGCTCATCCTCTGTGCAGCTAATCTGCCTTTCC
CGCCTGAGTCCGGTGCCATGTGCTCCAAGGATGCTCGTACTCCAACAATC
CGGTCGCTTGGGTTCGCCAACTGCCTTATCAGCTCGTATCCCGACATTCC
GAAGCGCGACCTGGTTCAGGGATGTGCCTTGGAGCATGGTATCGACTTTG
AGGCTCTTAACAAGTGTGCCAGTCGAGAATATGATGACCTTGACGACGAT
GATGATAGCGACGAGAAGACACCGCTTAGTGGCATTGCTCTGTTGCGCCA
GAGTGCATTACATAGCGATAAGCTCAACGTCAGGACCAGCTGTACTCTGC
GCCTGAATGAATCTACCTGGTGCGTTCGGGATGGTGGAGTCTGGCGGGAC
TGCGCCCAGGAAGGAGAGGGCAGCAAGGTCTCGGTGCTTGTGGACGAGGT
GAAGAAGCTGTGGGACAAGGTCAACTAAATGGAAAAACTCCCAACTCAAT
CCAAAGCCGACACTTCCGGCTATGTCGACCTCTCCGAGTCGTCCGTGGCG
CGCCCGATCAGCACCCGTCGCGACCGGGTCGTTACTCGGCTGGCCGCATG
TCTGGGGCTCATCACCATCGCCTTCCTAGCTTTATCATGGACCCCTATCT
CCATTTCCGGCTTTAAGCTCTTTTCGTGCCATAGATGGAGAGGACAGCAT
GATGTTTCATTTCCCCCTGACTTGGGCAGGGAGGAAGCTCCGTTGATGAA
TGGTCCACTGCATGAACTGTCCACCCTGGACGGGAGCCGCCTAGCCTCGA
GTAACAGAATTCCCCTGGAGGCTCATGTCATGAGTAAATGCCCCGACGCT
CGGGATTGTCTCCAACAGCTTGTCATTCCTGCTATGGAGCAGATCAGCGA
TAAAGTCGACTTCAAGCTGTCTTTCATCGCCGCAGTATCCAACAAGTCAT
CAGAGATCCAATGCATGCACGGTCCCACCGAATGCATCGGTGACATGCTC
ATCCTCTGTGCAGCTAATCTGCCTTTCCCGCCTGAGTCCGGTGCCATGTG
CTCCAAGGATGCTCGTACTCCAACAATCCGGTCGCTTGGGTTCGCCAACT
GCCTTATCAGCTCGTATCCCGACATTCCGAAGCGCGACCTGGTTCAGGGA
TGTGCCTTGGAGCATGGTATCGACTTTGAGGCTCTTAACAAGTGTGCCAG
TCGAGAATATGATGACCTTGACGACGATGATGATAGCGACGAGAAGACAC
CGCTTAGTGGCATTGCTCTGTTGCGCCAGAGTGCATTACATAGCGATAAG
CTCAACGTCAGGACCAGCTGTACTCTGCGCCTGAATGAATCTACCTGGTG
CGTTCGGGATGGTGGAGTCTGGCGGGACTGCGCCCAGGAAGGAGAGGGCA
GCAAGGTCTCGGTGCTTGTGGACGAGGTGAAGAAGCTGTGGGACAAGGTC
AACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004275KJC3_004275Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004275-T1.utr5p1KJC3_004275-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004275-T1.exon1KJC3_004275-T1.exon1Aspergillus niger KJC3exon
KJC3_004275-T1.exon2KJC3_004275-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004275-T1.cdsKJC3_004275-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004275-T1.utr3p1KJC3_004275-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004275-T1KJC3_004275-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004911
DBxrefPFAM:PF03227
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4403286..4404885 +
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