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KJC3_004280-T1, KJC3_004280-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004280-T1
Unique NameKJC3_004280-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4412354..4415322-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004280-T1 ID=KJC3_004280-T1|Name=KJC3_004280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2969bp|location=Sequence derived from alignment at ch3:4412354..4415322- (Aspergillus niger KJC3)
ATTAAGTCAGTGACAATGAGCTCCAGAGCAGTAGAAGCGGCGGTGATGAG
GCATCTTCCCTGGAGGCGCTCGGATCCAGATGAGATTGGCCCGGATAAAG
CCTGGCCTCAATAGTGCTAACATTGATGTCTGACAGTCATCTAGATTCAA
TCCTGAGCCATTCTTTCTACGCCGCATCTCTTGCGCGACGCGCCGCGGCT
TTACTGCGTTGAACAACGCGGTGACCCGTGCCTTTCCTTTTAGAGTGGCT
TGTTCTAGGGTAACTTCTTCACATGTGTCGATACGAACTTCTTGGATGTG
GACTTCTATACTGGCAGCGTCATAAAACCAGAAAAGATAAGGATCATTCC
TTGAGGTTTGTGCTTTACCCTCGTGCTTTTGGGCCTGTCTAGATATCTGA
CTTTATCGTCTCCAGAGAGATCCGCGCACAATGCTCCACGAGATCCTCCT
CTCCCTCTCGGGTCAGCCATCGCCTCTTTTCAATCCAGAGACTGAAGGAG
GTGCTATCTCTGAAGATGCCTTTCCCTTGGTTTCCCCTCCGGAGAAAGCC
CTCCTCGCCTCTCTTGCCCATCTGAGCCGCCTCCATACCGACCTACGAAC
ACATACTGCCTTAATTTCTTCGTCCCACCCTTCTGTTATCTGTCGTGCAG
TCTCGACGGCGATCAGTTCACGTCACCTGGGTGAATTCCAGAGGAAAATT
TTAGAAGTGGAGAAATCGATTCTGGTTGAGGATAGTGGATACGTGGGCGG
TTACGGAATTGTGCCATTGTCGACGATTGTTGGCGAATTTTCTCCATGGA
CGCGACGATTGGAATGGCTGTGGGAGACCGTAAGGTTAATATGGCCCATA
TACTCGCGGAATAAAGACCAGCTTTGCACTGGCGTGGCTCTGATCGATCA
CCTTCGGGCGGAAACGCAAACAGGGTACGTTGACCTGAAAGACATAGCTT
TGCATTTGGTTGGTATTGCAGAGACTGCTTGGATGAGGCAATTGTCCCCC
TGGCTGCTGTACGGAAATCTCCCCATCCTCGGTGGGTCCGACTTCTTCAT
ACAACGCGAAAATGCAAGCCATGATCGGCCGCCCACTGCCACGCAGTTCA
TCGTGCATTCAGAGCTCCTGCCTCAGTTTGTAACAGCTCATACGGCCTCA
TCTATCTTATTCATCGGGAAGACGTTGAATCTCATTAGAGCAAAGCGCAA
TGCACCTGCTGCGAACCCCTCTGCTGGGTTATCGACTACTTCGGTCACAC
TACACACGGAGCATATAGAACAGCTTGCTGCATTGAAATCACCTATATCA
GCGTCGAGACTGTCAAGTGCTGTGAATGCCATCCGGCTCTCTCTGTCGCA
AAGCACGCTCTCCAAGATTTTCCCATTACCCAAGGTCCTCGAAGTCCTCT
CGGTTCTCCATGATTTTCTGTTACTCCGACGGGGCGAATTTGCGACGGCA
TTGGTATCTCATGCTGATACCCGCATTCAAGAGAGGTATCGGAAACACGG
GCATTCAGCCTCCAGGTATAAAACTTTAGAAGATCTAAAGGGCCTTTCTA
TTAAGGAAGGAGATGTAGTGACTGCTCTGTCACAAACGCTCTCAGAGCTC
TACTCTCTGCAAACAGAAGACGATCCCGCAGACGATGAACTCGATTTAGC
AAAGGAGCTGCTTCGGCTGTCGATCAAGCAGGATGTGGATAACAACCCCG
CGCTGTCTCCCGACATTGCTGGATCAGATATGAATGCCAGAATTTCGGAC
GTCGCTTTCGACGACCTTCTTTTCCCCACTCCAACATGTCTTTCGGTCCA
CGTCCGCTCGCCCCTCGATTTGTTTCTTTCCGCCTCTGATATATCGGTCT
ACTCGAAGATTCACTCTTACATTCTCGGTATCCGACGCGCCCAGATGCAT
TTGGGCGACTTGTGGAAGCATACATTCCTTCGAAAGATCCATCCGTCTCC
ATGGGGTCCGCCTCGCAGCAGCACCCCTTACGGCCAGAGTAGACTCAACC
TCGGCAGACAAAGAGACAACATCAGGACTCGGCAGATGAGGCCAATCTGG
GCAACGAGCAGTGCCTCCCTCTTTGTACTGTCAGAAATAGGAAGCTACTT
CCAGGGAGAAGTTCTCAATGGCAACTGGCAACATTTTCGAGAATGGATCG
AAGGTGGATCTCCAACAACGGGCTCACGGCCTGGAACCGCTTCCTCCGCT
AATAGTAAGCGCACCGATAATTTTCAGGGCATTGACGACCCGGCCGATTC
TGGTTCCGGAGGTGATAGTCAGACGGTCCAACGGCATGACCCTGAAACAT
TGACCGCGGCGCATCGTCGTTATCTCTTTTCTCTTGTTGAATCGCTTTTC
CTCACGGACATACCCTTTACCAAAGCCCTCCGATCCTTACTGACGAGTGT
GGAACACTTTATTGCGCTAGTAGTTCGACTGGAAAGCATACAGCGCAACA
TGGACCTTGAGACCGATGAGGGCGTTGTCGATGCTTTAGTAGACTATGCA
GGGGAAGAGAGGGGGGTATGGCAATCACTCGGTGTTGCGCGGGCTAGTGT
CGAAGCAGGAATCAAGGATGCTGTGGCACGCCTGCGAGACATTGATGACA
GCCGATCTGGAGAGGGGCGGCAGATGCTTGATTTTGTGAGGGACTCTCGT
GAAAACGGGTCGCTTCAAGCCAATGGCTCTGCGACCGAGCCCGGCTCTTT
CCACTATGTGCCTCGGAAAGCGGCTGGTGTTGACCGTCTGCTCATGAAGC
TGGAATTCGGCAATGCTAATGGAGGCATGGGACTTGGAGTCACTGCTGCA
GGTACTTTCGGTGAAATGGCATAATTAGAAGGCTGTTCATTGCTGGCACA
TTGCATATAGGTGGTCGAGCCGTGGCTGGCTAATGAGCAGCGAAGACAGA
TTATGACTGTCATGTCACGTTATGATTTATGAATAGCATGGCTTTACGGT
GTAAGAAAGTGGCTATGGA
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Coding sequence (CDS) from alignment at ch3:4412354..4415322-

>KJC3_004280-T1 ID=KJC3_004280-T1|Name=KJC3_004280-T1|organism=Aspergillus niger KJC3|type=CDS|length=2394bp|location=Sequence derived from alignment at ch3:4412354..4415322- (Aspergillus niger KJC3)
ATGCTCCACGAGATCCTCCTCTCCCTCTCGGGTCAGCCATCGCCTCTTTT
CAATCCAGAGACTGAAGGAGGTGCTATCTCTGAAGATGCCTTTCCCTTGG
TTTCCCCTCCGGAGAAAGCCCTCCTCGCCTCTCTTGCCCATCTGAGCCGC
CTCCATACCGACCTACGAACACATACTGCCTTAATTTCTTCGTCCCACCC
TTCTGTTATCTGTCGTGCAGTCTCGACGGCGATCAGTTCACGTCACCTGG
GTGAATTCCAGAGGAAAATTTTAGAAGTGGAGAAATCGATTCTGGTTGAG
GATAGTGGATACGTGGGCGGTTACGGAATTGTGCCATTGTCGACGATTGT
TGGCGAATTTTCTCCATGGACGCGACGATTGGAATGGCTGTGGGAGACCG
TAAGGTTAATATGGCCCATATACTCGCGGAATAAAGACCAGCTTTGCACT
GGCGTGGCTCTGATCGATCACCTTCGGGCGGAAACGCAAACAGGGTACGT
TGACCTGAAAGACATAGCTTTGCATTTGGTTGGTATTGCAGAGACTGCTT
GGATGAGGCAATTGTCCCCCTGGCTGCTGTACGGAAATCTCCCCATCCTC
GGTGGGTCCGACTTCTTCATACAACGCGAAAATGCAAGCCATGATCGGCC
GCCCACTGCCACGCAGTTCATCGTGCATTCAGAGCTCCTGCCTCAGTTTG
TAACAGCTCATACGGCCTCATCTATCTTATTCATCGGGAAGACGTTGAAT
CTCATTAGAGCAAAGCGCAATGCACCTGCTGCGAACCCCTCTGCTGGGTT
ATCGACTACTTCGGTCACACTACACACGGAGCATATAGAACAGCTTGCTG
CATTGAAATCACCTATATCAGCGTCGAGACTGTCAAGTGCTGTGAATGCC
ATCCGGCTCTCTCTGTCGCAAAGCACGCTCTCCAAGATTTTCCCATTACC
CAAGGTCCTCGAAGTCCTCTCGGTTCTCCATGATTTTCTGTTACTCCGAC
GGGGCGAATTTGCGACGGCATTGGTATCTCATGCTGATACCCGCATTCAA
GAGAGGTATCGGAAACACGGGCATTCAGCCTCCAGGTATAAAACTTTAGA
AGATCTAAAGGGCCTTTCTATTAAGGAAGGAGATGTAGTGACTGCTCTGT
CACAAACGCTCTCAGAGCTCTACTCTCTGCAAACAGAAGACGATCCCGCA
GACGATGAACTCGATTTAGCAAAGGAGCTGCTTCGGCTGTCGATCAAGCA
GGATGTGGATAACAACCCCGCGCTGTCTCCCGACATTGCTGGATCAGATA
TGAATGCCAGAATTTCGGACGTCGCTTTCGACGACCTTCTTTTCCCCACT
CCAACATGTCTTTCGGTCCACGTCCGCTCGCCCCTCGATTTGTTTCTTTC
CGCCTCTGATATATCGGTCTACTCGAAGATTCACTCTTACATTCTCGGTA
TCCGACGCGCCCAGATGCATTTGGGCGACTTGTGGAAGCATACATTCCTT
CGAAAGATCCATCCGTCTCCATGGGGTCCGCCTCGCAGCAGCACCCCTTA
CGGCCAGAGTAGACTCAACCTCGGCAGACAAAGAGACAACATCAGGACTC
GGCAGATGAGGCCAATCTGGGCAACGAGCAGTGCCTCCCTCTTTGTACTG
TCAGAAATAGGAAGCTACTTCCAGGGAGAAGTTCTCAATGGCAACTGGCA
ACATTTTCGAGAATGGATCGAAGGTGGATCTCCAACAACGGGCTCACGGC
CTGGAACCGCTTCCTCCGCTAATAGTAAGCGCACCGATAATTTTCAGGGC
ATTGACGACCCGGCCGATTCTGGTTCCGGAGGTGATAGTCAGACGGTCCA
ACGGCATGACCCTGAAACATTGACCGCGGCGCATCGTCGTTATCTCTTTT
CTCTTGTTGAATCGCTTTTCCTCACGGACATACCCTTTACCAAAGCCCTC
CGATCCTTACTGACGAGTGTGGAACACTTTATTGCGCTAGTAGTTCGACT
GGAAAGCATACAGCGCAACATGGACCTTGAGACCGATGAGGGCGTTGTCG
ATGCTTTAGTAGACTATGCAGGGGAAGAGAGGGGGGTATGGCAATCACTC
GGTGTTGCGCGGGCTAGTGTCGAAGCAGGAATCAAGGATGCTGTGGCACG
CCTGCGAGACATTGATGACAGCCGATCTGGAGAGGGGCGGCAGATGCTTG
ATTTTGTGAGGGACTCTCGTGAAAACGGGTCGCTTCAAGCCAATGGCTCT
GCGACCGAGCCCGGCTCTTTCCACTATGTGCCTCGGAAAGCGGCTGGTGT
TGACCGTCTGCTCATGAAGCTGGAATTCGGCAATGCTAATGGAGGCATGG
GACTTGGAGTCACTGCTGCAGGTACTTTCGGTGAAATGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004280KJC3_004280Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004280-T1KJC3_004280-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004280-T1.cdsKJC3_004280-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004280-T1.utr3p1KJC3_004280-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004280-T1.exon2KJC3_004280-T1.exon2Aspergillus niger KJC3exon
KJC3_004280-T1.exon1KJC3_004280-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004280-T1.utr5p2KJC3_004280-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004280-T1.utr5p1KJC3_004280-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR041470
DBxrefInterPro:IPR040457
DBxrefPFAM:PF17681
DBxrefPFAM:PF04130
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4412354..4415322 -
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