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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4430013..4432775+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004285-T1 ID=KJC3_004285-T1|Name=KJC3_004285-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2763bp|location=Sequence derived from alignment at ch3:4430013..4432775+ (Aspergillus niger KJC3)
CAGCCCCAGTCGAATCACAACTGCAGCCCCTCTTGCTCTCTCTCGCCTCC
CGTCCGCTCCGGGCGCTGCGACTCTTTTCTCGCTCCCGGTCTTCTTTTCA
ACTCTTGTCCCGCCATCCGTTGATGATTCCCCATCCCACAACACTAATCG
CAAATTCGCCCGCCCCCCCCGATCTCTTACACTTTCACTCTCGCATTCAC
TTTCCATTATCTCTCCCATCTTTATCCCACAATCTTCTCTTTCTCTTCCT
ATTCCAAATCCTCTTCTCTTGTTTCCGCACTCTGCATTCCGTCCGACCGC
TTGTCATTCTTCGACCTTACTACTCCGTCTCTTTTCTTTGTTACTCTACT
CCGGAGTTGCGTTACTGTCGGGATTCCTGAGCGCTGGTCTTTGTTTATAT
CCGCCCTCGAATTCCTCAGCATATCCTTCGTACCGATATAACTTCGCTTT
ACTTTTTGTTGCGTTCGTTTCGCCACAACCACACAACAAAATGTCTACGT
TCTTCTACGGTCACCAGCAACAGCACCAGCACCAGCAACACCCTCACCAT
GGCGCTACCGCCCACATGGCCAACTCGAACAATCACCATGGGGGTCGTTC
CCGTCGGGGACCCAAGATGGCTGCCCAGAATGCTCAGCGCCAGTTTAGAG
GTGTCAAGAGTATGAGGGAGCTTGCAGAGGCCCCTGCTGTGACGGCTTTC
CGTGCCCGCTTCGAGGCTGGACGGTCTTTTGACCTGGATGACGACCTGGA
GTTTTGCCCCAGTCTCCTGACGGAAGATGATGTATGTTTGTCGAACCCCG
GCCTAGTACACCCTCCCTCTCCGTTCGTACTACGGATATCTTGACTGCCG
ACCCCGTACTTTAATGGAACAGCTTGTTGACCCCTGATATTACAGCTGCA
CTCCATCCACTCTGCTTCCTCGGATCGGTCATCTCTCTCCAGTGGATCTC
CCGATACCTCTCCTCTCCAGCACCAAATCCAGCCTGTCCAGCAGGTCACT
CCCTCCATCTCCCTGTCTCCTGCCTCCAGCAACTCCTATGTTCACTCAGG
GGTTAGCGGTAATCTTAATCACGTGAACTTCCAGCAGCCGTCTGCAGTCC
GCACCCGCAAGGTTATCCCGATCGTCAACCCCAATACCGGCATGACCTTG
ACGAGCCCGCCAACGTCAATCTCCCCGGCTTCGATGCAGAATGCCCAACG
TCGGTGGTGAGGACCGCGATTCTGGCAAGTCGCCGTTCCATTCGGCAAAG
GGCCGCTTAGGCTCATAGCATGTTCACCACGTTCGTCCGGCTTCTGCATC
ATCGGGCTCCCTAACCGCGGGTTATAATTGTTACTGCTTTGTTTTGCTTT
CTGTTCGACACGGCCATCGCATTCTTACGATTCGACTGATCTTCCCTTCT
CCTCTTTTTGGCTTGACGAGCGCAAAAACAGCAAAGGATAAACCAGTGTT
TCTCTGTATATACACCTTACTTCGATGACGACTTCGAGCAACTTATACCT
AGACTGATGCTTTCGGCTTCCTGCGAGCGACGGCGCCTGCGATATTCGAT
TTTTGCATTCCACCTCAAACGATACCTTGTTTTTATCTTACGGTTAGGGA
AACCCCTTGTGCTTTGAACCTCGAGTTTTGGCCGCGATGATGTATAGAAA
GCGCGGCGATCTGCCATTCAGGCGCGCATCTATGGTCCGGAGTTGCTTTT
TTGGTTTCCCACGGCGGCTATGCCAGATTTGCTGTTGGCGGTTATACCTC
ATCTTTTCGGCTTGGTGTTTTGTCACATTTTGGGTGGGATGGATCATTTT
CTCATGCTTTTCAGGGATTTAGAAAGGCGGAAACGACATATACGTCTGCA
TTGATTGGGCTTTGCTGAGTTGTTTGGGATGTTTGGCTGGTTTCGACCTA
TACTTCGCATATGTTTTCATTTCTTGAAAAATTCTGTTTGTTATACCAAT
GTATATGGGTTGGTTGGGGAATTGGTGACACGCGGTGCTTGTTACTTTCA
GGTCAACTGGCTGTGAAAATCCATGGATTGGATGAGGAGTTTCTCTTTAT
TTCCTTTTTTTGCCGGGGTCACACTCGCCTTCTTTCGCGAGATAGACCAC
TGTCTTGATGGGAGTTGTCAGTTGACGACATAATTCGCTTCTGTTCGCCT
CCACGTTGATTCGTTCGGATGTTTTTAAAGTCATGTTCTTCGACTCCTGG
GGACTCCCGGAGAATGTGATGCAGTGTATGATCTTGCTGATTCTGTTCGC
TTCTTGGGTATTCCGTCTCTTACCATATCTCCTTTGTCTATACGCTTTTT
GGCTGGAACTATGGGGGTAATGCCTATACATAGTTGTGAAATTAGCTTTG
GACTCCATTCAATCTTGGGGCTTGCCTTGAAAACAGTAGATGCAGTAGAT
GTCGGGATGATAATTTTGTGGTAGTTGCAGCGGTTGTAGTACTTCGCCAC
ATGACCTCATAATCTGGGGCGATATCGTATCGTGCACGCTGCAGATTGAG
AGGGGCAATAGAGCACAGCGGTTGCTATCGCAACGGCTACTAGCTTTTAA
TTAAGAAGTGGTTATCAGATTGCCGCGCTTTAGTTCGGGTTGAGGAGTGA
ACGCTCGATGCTGTTCAGAGGTCTAGGCGGATATATATTCATTGCTGAGA
CGGGTGCCGAGCCAACCCACAACGCTCAAATCACCATAGCACTGAAAACA
TCTGAACGCAGCGACTGCACTTGATAATAAAGATAATTAGTAGTGTTCTG
AAGTGAATTCTGC back to topCoding sequence (CDS) from alignment at ch3:4430013..4432775+ >KJC3_004285-T1 ID=KJC3_004285-T1|Name=KJC3_004285-T1|organism=Aspergillus niger KJC3|type=CDS|length=1212bp|location=Sequence derived from alignment at ch3:4430013..4432775+ (Aspergillus niger KJC3)
ATGTCTACGTTCTTCTACGGTCACCAGCAACAGCACCAGCACCAGCAACA
CCCTCACCATGGCGCTACCGCCCACATGGCCAACTCGAACAATCACCATG
GGGGTCGTTCCCGTCGGGGACCCAAGATGGCTGCCCAGAATGCTCAGCGC
CAGTTTAGAGGTGTCAAGAGTATGAGGGAGCTTGCAGAGGCCCCTGCTGT
GACGGCTTTCCGTGCCCGCTTCGAGGCTGGACGGTCTTTTGACCTGGATG
ACGACCTGGAGTTTTGCCCCAGTCTCCTGACGGAAGATGATCTGCACTCC
ATCCACTCTGCTTCCTCGGATCGGTCATCTCTCTCCAGTGGATCTCCCGA
TACCTCTCCTCTCCAGCACCAAATCCAGCCTGTCCAGCAGGTCACTCCCT
CCATCTCCCTGTCTCCTGCCTCCAGCAACTCCTATGTTCACTCAGGGGTT
AGCGGTAATCTTAATCACGTGAACTTCCAGCAGCCGTCTGCAGTCCGCAC
CCGCAAGGTTATCCCGATCGTCAACCCCAATACCGGCATGACCTTGACGA
GCCCGCCAACGTCAATCTCCCCGGCTTCGATGCAGAATGCCCAACGTCGG
TGGTGAATGTCTACGTTCTTCTACGGTCACCAGCAACAGCACCAGCACCA
GCAACACCCTCACCATGGCGCTACCGCCCACATGGCCAACTCGAACAATC
ACCATGGGGGTCGTTCCCGTCGGGGACCCAAGATGGCTGCCCAGAATGCT
CAGCGCCAGTTTAGAGGTGTCAAGAGTATGAGGGAGCTTGCAGAGGCCCC
TGCTGTGACGGCTTTCCGTGCCCGCTTCGAGGCTGGACGGTCTTTTGACC
TGGATGACGACCTGGAGTTTTGCCCCAGTCTCCTGACGGAAGATGATCTG
CACTCCATCCACTCTGCTTCCTCGGATCGGTCATCTCTCTCCAGTGGATC
TCCCGATACCTCTCCTCTCCAGCACCAAATCCAGCCTGTCCAGCAGGTCA
CTCCCTCCATCTCCCTGTCTCCTGCCTCCAGCAACTCCTATGTTCACTCA
GGGGTTAGCGGTAATCTTAATCACGTGAACTTCCAGCAGCCGTCTGCAGT
CCGCACCCGCAAGGTTATCCCGATCGTCAACCCCAATACCGGCATGACCT
TGACGAGCCCGCCAACGTCAATCTCCCCGGCTTCGATGCAGAATGCCCAA
CGTCGGTGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004285-T1.utr5p1 | KJC3_004285-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004285-T1.utr3p1 | KJC3_004285-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027915 |
| DBxref | PFAM:PF14618 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4430013..4432775 + |
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