|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4436047..4437441+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004288-T1 ID=KJC3_004288-T1|Name=KJC3_004288-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1395bp|location=Sequence derived from alignment at ch3:4436047..4437441+ (Aspergillus niger KJC3)
ATGACGAGCATCACCCTCGATGAACTGCTCGCGATGGAGGCGAACTGCGA
CCGAGACGAAGTTGTCGACTTGCGCTCACTAGAACTGGTCTCCAGCTACG
ATGACCACCTCATGTGCCCGATATGTCACTGCCCTTTCGTTCGCCCCGTG
CGCCTTCAGTGTGATCATGTCTTCTGTCAGAAGTGTCTAAATACTGCCAT
CACTGCGTTTTCCGCCAGCCGAGACGACTTCACCTGTCCCACCTGCCGGA
CTCCCACGAGGGGTGTCTACCTCAACGTGCCTCGTCTGCTACTCAATATG
TGTGATGATATCAAAGTGCGATGTCCTTTTCGGGATGAAGGTTGCGAGGA
GATTATACCAAGAGGTCATATTCAGTCTCATGTCGACAAGTATTGTGGCT
ACAGGCTCATGAAGTGTCCGGATAGCTCTTGCAACAAGACGACCCGGAAG
AAGGACCTCAGTTCTGAGGGCCGGTGCTTGCATGAGCTTCAACGCTGTCT
ACGATGCGACGAGTATGTCGCGGAACAAGATTACGAGGTATGGGAGTTGC
CTTCATACCATAGAATACTGCTAATCAGATTTCTTTGTCTACAGGAACAT
GTCAAGGATCTATGCCCGAGTCTTAAAACAACATGTCCCGACTGCCAGAT
AAGCGTCCTACGCAAATCACTGCGGGAACACATCGACTCCTGCCCCGAGG
TTGTCCATCCTTGCGCGGCCTCGAAATACGGCTGTCCCGTCAAGGTCAAG
CGTGCAGACCTGACGACACACGAACAGACTTGTCCGCTGATAGCCATGGG
CCCGTATTTTGAAGCGCAGAATGCACGACTCGATTCTCTTGAACTTACCA
TCCGTCACCTTCAACAGCGGAACGAGATTTTCGAGGACGGAATTTCCAAC
ATCCGCTCGACATTAGCCCAGTCGACTCGTACTCTAGCCGAGCAAGATCC
CCCGACAAATTCCGATGCCCCTCGTCGACGAGATTCGGCAAGCAATCAAT
CTCAGATCGACAGCTCTAACCTCTATACTGCCACTACAACGAACTACTTA
CTCTCCCTCCACGAGTCTCTTCGCGAAGAGGTCGGACAGCTCTCCAACGC
CATCACAGATCTAGACGCCCGTGCTAGCATGGCTCTCATGAACGAATGTC
TTCGCTTAAAAGAAGACATGGCGCACACCAACGCAGCCGTGGGCAGCATT
CGCATGCAGGTGCAGTGGCTCTTGAACCCTCGTCTGCATCAGGGCCAGCG
AGCAGGTGCACGTCCAAACAACGCTAGTGGCAGCAACGGCAGCCCTGCGT
CTGCGTCCGGGCCGAGTAGTGCCGCTGGTCCTTCTACTGCTTTTCTTCGA
CCGCGGAGACTCAGCGATAGCGGACGAGAGGGGACCAAACTATGA back to topCoding sequence (CDS) from alignment at ch3:4436047..4437441+ >KJC3_004288-T1 ID=KJC3_004288-T1|Name=KJC3_004288-T1|organism=Aspergillus niger KJC3|type=CDS|length=2676bp|location=Sequence derived from alignment at ch3:4436047..4437441+ (Aspergillus niger KJC3)
ATGACGAGCATCACCCTCGATGAACTGCTCGCGATGGAGGCGAACTGCGA
CCGAGACGAAGTTGTCGACTTGCGCTCACTAGAACTGGTCTCCAGCTACG
ATGACCACCTCATGTGCCCGATATGTCACTGCCCTTTCGTTCGCCCCGTG
CGCCTTCAGTGTGATCATGTCTTCTGTCAGAAGTGTCTAAATACTGCCAT
CACTGCGTTTTCCGCCAGCCGAGACGACTTCACCTGTCCCACCTGCCGGA
CTCCCACGAGGGGTGTCTACCTCAACGTGCCTCGTCTGCTACTCAATATG
TGTGATGATATCAAAGTGCGATGTCCTTTTCGGGATGAAGGTTGCGAGGA
GATTATACCAAGAGGTCATATTCAGTCTCATGTCGACAAGTATTGTGGCT
ACAGGCTCATGAAGTGTCCGGATAGCTCTTGCAACAAGACGACCCGGAAG
AAGGACCTCAGTTCTGAGGGCCGGTGCTTGCATGAGCTTCAACGCTGTCT
ACGATGCGACGAGTATGTCGCGGAACAAGATTACGAGGAACATGTCAAGG
ATCTATGCCCGAGTCTTAAAACAACATGTCCCGACTGCCAGATAAGCGTC
CTACGCAAATCACTGCGGGAACACATCGACTCCTGCCCCGAGGTTGTCCA
TCCTTGCGCGGCCTCGAAATACGGCTGTCCCGTCAAGGTCAAGCGTGCAG
ACCTGACGACACACGAACAGACTTGTCCGCTGATAGCCATGGGCCCGTAT
TTTGAAGCGCAGAATGCACGACTCGATTCTCTTGAACTTACCATCCGTCA
CCTTCAACAGCGGAACGAGATTTTCGAGGACGGAATTTCCAACATCCGCT
CGACATTAGCCCAGTCGACTCGTACTCTAGCCGAGCAAGATCCCCCGACA
AATTCCGATGCCCCTCGTCGACGAGATTCGGCAAGCAATCAATCTCAGAT
CGACAGCTCTAACCTCTATACTGCCACTACAACGAACTACTTACTCTCCC
TCCACGAGTCTCTTCGCGAAGAGGTCGGACAGCTCTCCAACGCCATCACA
GATCTAGACGCCCGTGCTAGCATGGCTCTCATGAACGAATGTCTTCGCTT
AAAAGAAGACATGGCGCACACCAACGCAGCCGTGGGCAGCATTCGCATGC
AGGTGCAGTGGCTCTTGAACCCTCGTCTGCATCAGGGCCAGCGAGCAGGT
GCACGTCCAAACAACGCTAGTGGCAGCAACGGCAGCCCTGCGTCTGCGTC
CGGGCCGAGTAGTGCCGCTGGTCCTTCTACTGCTTTTCTTCGACCGCGGA
GACTCAGCGATAGCGGACGAGAGGGGACCAAACTATGAATGACGAGCATC
ACCCTCGATGAACTGCTCGCGATGGAGGCGAACTGCGACCGAGACGAAGT
TGTCGACTTGCGCTCACTAGAACTGGTCTCCAGCTACGATGACCACCTCA
TGTGCCCGATATGTCACTGCCCTTTCGTTCGCCCCGTGCGCCTTCAGTGT
GATCATGTCTTCTGTCAGAAGTGTCTAAATACTGCCATCACTGCGTTTTC
CGCCAGCCGAGACGACTTCACCTGTCCCACCTGCCGGACTCCCACGAGGG
GTGTCTACCTCAACGTGCCTCGTCTGCTACTCAATATGTGTGATGATATC
AAAGTGCGATGTCCTTTTCGGGATGAAGGTTGCGAGGAGATTATACCAAG
AGGTCATATTCAGTCTCATGTCGACAAGTATTGTGGCTACAGGCTCATGA
AGTGTCCGGATAGCTCTTGCAACAAGACGACCCGGAAGAAGGACCTCAGT
TCTGAGGGCCGGTGCTTGCATGAGCTTCAACGCTGTCTACGATGCGACGA
GTATGTCGCGGAACAAGATTACGAGGAACATGTCAAGGATCTATGCCCGA
GTCTTAAAACAACATGTCCCGACTGCCAGATAAGCGTCCTACGCAAATCA
CTGCGGGAACACATCGACTCCTGCCCCGAGGTTGTCCATCCTTGCGCGGC
CTCGAAATACGGCTGTCCCGTCAAGGTCAAGCGTGCAGACCTGACGACAC
ACGAACAGACTTGTCCGCTGATAGCCATGGGCCCGTATTTTGAAGCGCAG
AATGCACGACTCGATTCTCTTGAACTTACCATCCGTCACCTTCAACAGCG
GAACGAGATTTTCGAGGACGGAATTTCCAACATCCGCTCGACATTAGCCC
AGTCGACTCGTACTCTAGCCGAGCAAGATCCCCCGACAAATTCCGATGCC
CCTCGTCGACGAGATTCGGCAAGCAATCAATCTCAGATCGACAGCTCTAA
CCTCTATACTGCCACTACAACGAACTACTTACTCTCCCTCCACGAGTCTC
TTCGCGAAGAGGTCGGACAGCTCTCCAACGCCATCACAGATCTAGACGCC
CGTGCTAGCATGGCTCTCATGAACGAATGTCTTCGCTTAAAAGAAGACAT
GGCGCACACCAACGCAGCCGTGGGCAGCATTCGCATGCAGGTGCAGTGGC
TCTTGAACCCTCGTCTGCATCAGGGCCAGCGAGCAGGTGCACGTCCAAAC
AACGCTAGTGGCAGCAACGGCAGCCCTGCGTCTGCGTCCGGGCCGAGTAG
TGCCGCTGGTCCTTCTACTGCTTTTCTTCGACCGCGGAGACTCAGCGATA
GCGGACGAGAGGGGACCAAACTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008974 |
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR027370 |
| DBxref | InterPro:IPR001293 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF02176 |
| DBxref | PFAM:PF13445 |
| DBxref | PFAM:PF14634 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF00097 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4436047..4437441 + |
|
