|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4443107..4444185+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004291-T1 ID=KJC3_004291-T1|Name=KJC3_004291-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1079bp|location=Sequence derived from alignment at ch3:4443107..4444185+ (Aspergillus niger KJC3)
CCGAGTGGAACAATCTTTTCTTCCCCGTCTAGCTCTCTCCCCCGCCATCA
CCCCGACATAACCACCACCACCACTCTTTTCACTCAACAACCACCACCAC
TCCAACACCAAAAGCTACAATGCCATCAACCCCTCACCTCAGCGCCCTCC
AACGCGACGGCTTCGTCGTGATCCCCTCGCTCCTAACCCCCACCGAAATC
GCCCACTACCGCACCATAGCCACCCACGCGACCACACTCACCCGGACAGG
AAAATGGCCGCACTTCCGCACCGTACCGAAGCAATTTCCTCCCTGGCCCA
CGACCCCGCCGCCAGCCTCGGAAGGCGGAATCTGGGGTGTGCAGCACCTC
CTGCACCCCGAGATGCCGGGACGGAGTGAATTCGCCAAGTTCTATTTCTC
GGAGAAGGTGCTTGCCGTGGCGGAGGAGTTGCTTGGTCTGACATCAGACA
CCAACACTACTAGCACCAATGGTGATGCTCCCGAGCCACTCGTAATGGAA
CTCTTCAACCTGCTCGTCGCGCCCGAAACCAAAGACTTCGAACTCCGCTG
GCACCGCGACGACATCCCCGAGACCGCGACCCCGGAGGAAGAACTAAAGA
TGCTGCAGGCCAAGAGTCCCAATGGGAAGCAGTCGCACGCGCAGTATAAT
CTGGCGCTGTGTGCGGATTCATCCTTGATTGTGATTCCGGGGTCGCATCG
ACGGGTGCGCACGGAAGTGGAGCGCAATGCAGCGCCATATGAGCCGGAGT
TGCCGGGGCAGTTGGTGGTGGAGTTGAAGCCTGGTGATGCGGTCTTTTAT
GATAGTAATATTCTGCATCGCGGGGTGTATAAGTGTAAAGAGGAGGGAGG
GGAGGAGACGAGGCTGACGTTGCATGGCAGTTTGGGGTTGAATGCGGCGG
GTTTGGCGGCGGAGGAGGATAAGAAGGTAAGGGCTACGGCGGTGTTGCAG
CATGGGGTCGGGGCGTGGGTGCATCGGGAGGATGCTGCTTTTGGGATTGG
GGAAAGGGCGGAGAGGATGCGTGCGAATTTGGTGGCGATGGGGAGTGGGG
AGGGGGTCGGGTATTCTTTGCAGGGTTGA back to topCoding sequence (CDS) from alignment at ch3:4443107..4444185+ >KJC3_004291-T1 ID=KJC3_004291-T1|Name=KJC3_004291-T1|organism=Aspergillus niger KJC3|type=CDS|length=960bp|location=Sequence derived from alignment at ch3:4443107..4444185+ (Aspergillus niger KJC3)
ATGCCATCAACCCCTCACCTCAGCGCCCTCCAACGCGACGGCTTCGTCGT
GATCCCCTCGCTCCTAACCCCCACCGAAATCGCCCACTACCGCACCATAG
CCACCCACGCGACCACACTCACCCGGACAGGAAAATGGCCGCACTTCCGC
ACCGTACCGAAGCAATTTCCTCCCTGGCCCACGACCCCGCCGCCAGCCTC
GGAAGGCGGAATCTGGGGTGTGCAGCACCTCCTGCACCCCGAGATGCCGG
GACGGAGTGAATTCGCCAAGTTCTATTTCTCGGAGAAGGTGCTTGCCGTG
GCGGAGGAGTTGCTTGGTCTGACATCAGACACCAACACTACTAGCACCAA
TGGTGATGCTCCCGAGCCACTCGTAATGGAACTCTTCAACCTGCTCGTCG
CGCCCGAAACCAAAGACTTCGAACTCCGCTGGCACCGCGACGACATCCCC
GAGACCGCGACCCCGGAGGAAGAACTAAAGATGCTGCAGGCCAAGAGTCC
CAATGGGAAGCAGTCGCACGCGCAGTATAATCTGGCGCTGTGTGCGGATT
CATCCTTGATTGTGATTCCGGGGTCGCATCGACGGGTGCGCACGGAAGTG
GAGCGCAATGCAGCGCCATATGAGCCGGAGTTGCCGGGGCAGTTGGTGGT
GGAGTTGAAGCCTGGTGATGCGGTCTTTTATGATAGTAATATTCTGCATC
GCGGGGTGTATAAGTGTAAAGAGGAGGGAGGGGAGGAGACGAGGCTGACG
TTGCATGGCAGTTTGGGGTTGAATGCGGCGGGTTTGGCGGCGGAGGAGGA
TAAGAAGGTAAGGGCTACGGCGGTGTTGCAGCATGGGGTCGGGGCGTGGG
TGCATCGGGAGGATGCTGCTTTTGGGATTGGGGAAAGGGCGGAGAGGATG
CGTGCGAATTTGGTGGCGATGGGGAGTGGGGAGGGGGTCGGGTATTCTTT
GCAGGGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004291-T1.utr5p1 | KJC3_004291-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4443107..4444185 + |
|
