|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4458754..4462577- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004295-T1 ID=KJC3_004295-T1|Name=KJC3_004295-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3824bp|location=Sequence derived from alignment at ch3:4458754..4462577- (Aspergillus niger KJC3)
GTTTTCTGGATCCCCCCAACCATCTCCCACTCGAGGAATCCCCGTTCAGA
CTCTCGCAAATGACTGCTGCTCCGTCTAGACGGCGGCTGCTTTCTTATTT
CTCCGTCTAGCGTCACGCGTTGGAACGCCTCCTCCGTCTACTTGCCTGAT
CAGTGTCTTAGTCTACGGCTTACAACGGAGCTATTCCCCTGTTGTAGATA
GGATTTTCCCCAGCATTGTTGACGGACTTCCGCCCCACTGTGTGTGCCAA
CCTTGGGCCTTGTTGATACTATTCCCCGTTGGGCGAGCTGGTATTCGGAT
GATCAACCGCTAAACAATATCTCTCCATCCACCAACATTTTCTATACAAA
TTTAGCCATCCGGTGGCAGGATAGAGCCTTGCGAGCACCCAGAGGTTGTG
GGCTGGCTTCAGCCTTGCTTGGGTGGTGGCCTCTGACGAGCCTGATCCTC
ACTCGAGTATGTTCACTGACAGCCTTTGTGTATCATCCCATTCATGCTTG
TCAGGTGTACAAAGACAATAAACTAAGCTCGCCTTGGCTGTATGCTTATT
GCTCTACATACAGCCGCACGCCCTGCAGACTGATATAACATAGATAGCCT
CATCACATTACTTTCACTGCCTCGAGCGATTTACGGCCGTTGCCGACGTT
CCTCACTGACTATTGCGGGGTCTACCTTTCCAGGCAACGCTACGTTCAAC
ATTTTCACCACCATTTCCCCCTTCCTATATAACCATCACAGCTAATAAGC
GACCCTTAATTTCCCTTTGGCTTTCTTATCAACCTTGATACTTTCATTCA
CCTGGACTTCCCTTTCAGATACTCTCAAACGTAGGAATACATCGCTTTTT
TTTTTCTTTCGCTCAAAGCAAACAAGAACAATGGAGGGGCCCAATTTCAC
CAATCCGATGTATCCATCGCTCCCTTTAAGACTGGGATATATGAACCATG
CAAATGCAGATCTTACTCTGGATGACAACCCTGCGCTGATTTGGGATCTG
TACGGCCACGGTTACTATCCGTTGCCTGACTACGACCAACCCATGAAGAG
ACAAAGGCAGTATAGTCGCGACAGCAGTCGCAGCAGCAAACGCAGCAGCA
ATCATGAGTCCATAATCAGCATTCTGGACAGTGATACTGATGGTAAAAGT
CGTCACGAGTCAGGGATCGAGTCAGGGAGCTCCTCGCGCCCATCGACCAT
TGCGACCACATCGACCTCGTCACGCTCCAATACGCACTCTGAAGCAGTTT
ACATTGACCTCACCCTGGAGGATGAGCTATTGTGGCAGATTACAGACATC
TTTCCGGGCATCAGTCATCAGCATGTGGAAGAGCTGATCGAACGTCATAA
AAGGCCCCAAGCGCACCAGCCTGCGCTGCCCCTGAATGCATTGAAGGAAA
GCGTTATTGAAGATATCTTACAGCATCCTAACTACCCCATGCAAGAAAAG
GTCAAGAAACGTAAGATTGAGGAGACGGAGGAGGAAGCTACGATACGGTA
TCTGCGAAATATCCCACAACGTGGTAGCCGTGCATACCTCCAGCTAGCGT
GAGTGCACCGCCCATCATTATGAAGTAACAAACGCTGAACTTTCTATTAC
AGAACCGGACTGCTAGCTCAAGAATTTGAATGGATGCCGCTAAAGCATAT
TCGGGATGTTCTGACCGACAAAAAAGAGCTATTCTCAGCGTATCTCACTC
TGCATTCTCAGGAGAATGAACAGACGGGAAAGTACACAAAGTTGAAAAGC
AAAAGGGTCTCGATAGCAGCAAACCTACCACAAGGCGACGAGGAGGTATC
TATCGCCGAGAACCTGGCTCGAGAACTAGGGGCCGCCAAGAAGAAAGCTG
AAAAAGAAGACCGTAAGTAATCTCTCTCTGAGTACGAGAAACCCATGCTG
ATCAGCTAATGACCCGCAAAGATGTACTTCGCAAGAAGAAGGAGGAGCAA
GAGGCTGAGATCAGAAATGAAGAAGAACACAGCCGAGCTGGAAACCTCAT
CGAATGCCAGTGTTGCTACCTCGATGTGCCAGCGAACCGATCGCTCCCTT
GTGAGGGGGAGAGCGTCCATCTCTTCTGCTTTACATGCATTCGAAAATCT
GCAGAGACCCAAGTTGGGCTTATGAAATATCAAGTTCAATGTGTCGACAC
TAGTGGCTGTCAGGCAAAGTTTTCTCGTGCGCGGCTCCAAGAAGCCCTTG
GGGAGGGTTTGATGGAAAAGCTCGACAACCTTCAGCAGCAGGATGAGATT
CAGCAAGCTGGATTGATAGGCCTTGAAGCTTGTCCATTCTGTGAATATAA
AGCCATCTATCCTCCCGTGGAAGAGGACCGCGAGTTCGTATGCAAAAACC
CCGAGTGCGAAATGGTCAGTTGCCGTCTTTGCCAGCAAGAAAGCCATATT
CCCCGCACTTGCGCAGAGGCCAAAAAAGAGAAGGGTATCCCCGAACGCCA
CTTGGTTGAAGAGGCAATGAGCAAGGCTCTGATCCGCCCTTGTCCCAAAT
GCAACGTGAAGATTGTCAAGGAGTCGGGCTGCAACAAAATGATCTGCTCC
AAGTGCCGTACTTCAATATGCTACATTTGCAAGAAAGATATTACCCGAGA
GAAGTACGACCATTTTGGGCGTCCTCCGACCTACTGTCCTAACACCGATG
ACCCAAGGTTATCGTTAGAAGAGGTCGAGAAGGCCCAAAAAGACACTATC
GATGTTATATTGGCACAAAATCCCAATTTGACTGAGGAGGAGCTGCGAGT
TCCTGACGCAGAAGCAGCACAGTCGGCCACGAATATGCCAGGCGTCATTC
CAGGTTATGGTCATGGATTCATACACCAATACGGGCAAGCGCCAGTCCAC
CATAATTACGTGGGGTATCCAAGACCAGGGATGCCAGTTGGAAGAGCCAA
CCCCCCAGCTGTTGTTCGATTTGATGCACCCGTAGGCATTGGAAATGGCT
GGGGTGGACAAGACTGGCCTCCGAACCCAGTAGGACAACCTAGGAACCCA
CCAGGGGGTCCTGCGCCCCCAAACGTTCCTGTGTACGGAGGCTTCGTAAA
CAGGGGCGTGAACTATCAAGGCAATCCTGGCCAAAATCAGACAAAAAGGG
CAGATACCCGCCCCCCATGGCGGTACTAGTGCCTCTACTACACTATCAAC
ACGAATTTATGAAGCACCAACCGTTACGTTGATCGACAATAATGATGTCC
CTGCTCCAGTAAGCCTTTACACCTCGTTTCATTCCAGAAAGAGCGATACA
CCATACCCTGGATCGACATTTGTCGATACTGCAGCTCCCATCTTGGTATA
CCGACTCCATTCCTTTTCCCCCAACACAGTTCCTGCTTGCTACCTTCACA
TCGAATCCAGCGTCTAACCCGTCCTCGTATCTCTGGCCCCTACATCACTC
TCGGTAACAACAGCAATCAGCTTTTCAGCGTTACACAAAGATGCTTTCTC
ATACCAGACTTCCCAACAGCGATCTATACCCCTGCTTCATCCGAGCACGA
AGACAAGACAAACAAGCAGTGCCCCCGTTATTGATAGAAAGCTTTCTTGG
AAGTTGGATTGTATCGCAGATTTTGGTTCCATCACTCTAATAAATGAAAT
ACTGTAGCGGTTTCCCTAGCATCTATCATCATCATTTTCTCCCCACCAGC
CCTTTCCCTTTCTCCCAGTCCCTTACCTCAACCATCCTACTTTAATCCTC
TATTTCCTCTTTCTCTATCATCTCCAGCTCACCATTTCTCTCGGTTTAGG
TAACTTAGAATGGCTAATTTATTCTATCTTTGGCTCAATCCAATAATCCA
ATGACTTGCTCATTACTCTTCTCT back to topCoding sequence (CDS) from alignment at ch3:4458754..4462577- >KJC3_004295-T1 ID=KJC3_004295-T1|Name=KJC3_004295-T1|organism=Aspergillus niger KJC3|type=CDS|length=6408bp|location=Sequence derived from alignment at ch3:4458754..4462577- (Aspergillus niger KJC3)
ATGTACTTCGCAAGAAGAAGGAGGAGCAAGAGGCTGAGATCAGAAATGAA
GAAGAACACAGCCGAGCTGGAAACCTCATCGAATGCCAGTGTTGCTACCT
CGATGTGCCAGCGAACCGATCGCTCCCTTGTGAGGGGGAGAGCGTCCATC
TCTTCTGCTTTACATGCATTCGAAAATCTGCAGAGACCCAAGTTGGGCTT
ATGAAATATCAAGTTCAATGTGTCGACACTAGTGGCTGTCAGGCAAAGTT
TTCTCGTGCGCGGCTCCAAGAAGCCCTTGGGGAGGGTTTGATGGAAAAGC
TCGACAACCTTCAGCAGCAGGATGAGATTCAGCAAGCTGGATTGATAGGC
CTTGAAGCTTGTCCATTCTGTGAATATAAAGCCATCTATCCTCCCGTGGA
AGAGGACCGCGAGTTCGTATGCAAAAACCCCGAGTGCGAAATGGTCAGTT
GCCGTCTTTGCCAGCAAGAAAGCCATATTCCCCGCACTTGCGCAGAGGCC
AAAAAAGAGAAGGGTATCCCCGAACGCCACTTGGTTGAAGAGGCAATGAG
CAAGGCTCTGATCCGCCCTTGTCCCAAATGCAACGTGAAGATTGTCAAGG
AGTCGGGCTGCAACAAAATGATCTGCTCCAAGTGCCGTACTTCAATATGC
TACATTTGCAAGAAAGATATTACCCGAGAGAAGTACGACCATTTTGGGCG
TCCTCCGACCTACTGTCCTAACACCGATGACCCAAGGTTATCGTTAGAAG
AGGTCGAGAAGGCCCAAAAAGACACTATCGATGTTATATTGGCACAAAAT
CCCAATTTGACTGAGGAGGAGCTGCGAGTTCCTGACGCAGAAGCAGCACA
GTCGGCCACGAATATGCCAGGCGTCATTCCAGGTTATGGTCATGGATTCA
TACACCAATACGGGCAAGCGCCAGTCCACCATAATTACGTGGGGTATCCA
AGACCAGGGATGCCAGTTGGAAGAGCCAACCCCCCAGCTGTTGTTCGATT
TGATGCACCCGTAGGCATTGGAAATGGCTGGGGTGGACAAGACTGGCCTC
CGAACCCAGTAGGACAACCTAGGAACCCACCAGGGGGTCCTGCGCCCCCA
AACGTTCCTGTGTACGGAGGCTTCGTAAACAGGGGCGTGAACTATCAAGG
CAATCCTGGCCAAAATCAGACAAAAAGGGCAGATACCCGCCCCCCATGGC
GGTACTAGAACCGGACTGCTAGCTCAAGAATTTGAATGGATGCCGCTAAA
GCATATTCGGGATGTTCTGACCGACAAAAAAGAGCTATTCTCAGCGTATC
TCACTCTGCATTCTCAGGAGAATGAACAGACGGGAAAGTACACAAAGTTG
AAAAGCAAAAGGGTCTCGATAGCAGCAAACCTACCACAAGGCGACGAGGA
GGTATCTATCGCCGAGAACCTGGCTCGAGAACTAGGGGCCGCCAAGAAGA
AAGCTGAAAAAGAAGACCATGGAGGGGCCCAATTTCACCAATCCGATGTA
TCCATCGCTCCCTTTAAGACTGGGATATATGAACCATGCAAATGCAGATC
TTACTCTGGATGACAACCCTGCGCTGATTTGGGATCTGTACGGCCACGGT
TACTATCCGTTGCCTGACTACGACCAACCCATGAAGAGACAAAGGCAGTA
TAGTCGCGACAGCAGTCGCAGCAGCAAACGCAGCAGCAATCATGAGTCCA
TAATCAGCATTCTGGACAGTGATACTGATGGTAAAAGTCGTCACGAGTCA
GGGATCGAGTCAGGGAGCTCCTCGCGCCCATCGACCATTGCGACCACATC
GACCTCGTCACGCTCCAATACGCACTCTGAAGCAGTTTACATTGACCTCA
CCCTGGAGGATGAGCTATTGTGGCAGATTACAGACATCTTTCCGGGCATC
AGTCATCAGCATGTGGAAGAGCTGATCGAACGTCATAAAAGGCCCCAAGC
GCACCAGCCTGCGCTGCCCCTGAATGCATTGAAGGAAAGCGTTATTGAAG
ATATCTTACAGCATCCTAACTACCCCATGCAAGAAAAGGTCAAGAAACGT
AAGATTGAGGAGACGGAGGAGGAAGCTACGATACGGTATCTGCGAAATAT
CCCACAACGTGGTAGCCGTGCATACCTCCAGCTAGCATGTACTTCGCAAG
AAGAAGGAGGAGCAAGAGGCTGAGATCAGAAATGAAGAAGAACACAGCCG
AGCTGGAAACCTCATCGAATGCCAGTGTTGCTACCTCGATGTGCCAGCGA
ACCGATCGCTCCCTTGTGAGGGGGAGAGCGTCCATCTCTTCTGCTTTACA
TGCATTCGAAAATCTGCAGAGACCCAAGTTGGGCTTATGAAATATCAAGT
TCAATGTGTCGACACTAGTGGCTGTCAGGCAAAGTTTTCTCGTGCGCGGC
TCCAAGAAGCCCTTGGGGAGGGTTTGATGGAAAAGCTCGACAACCTTCAG
CAGCAGGATGAGATTCAGCAAGCTGGATTGATAGGCCTTGAAGCTTGTCC
ATTCTGTGAATATAAAGCCATCTATCCTCCCGTGGAAGAGGACCGCGAGT
TCGTATGCAAAAACCCCGAGTGCGAAATGGTCAGTTGCCGTCTTTGCCAG
CAAGAAAGCCATATTCCCCGCACTTGCGCAGAGGCCAAAAAAGAGAAGGG
TATCCCCGAACGCCACTTGGTTGAAGAGGCAATGAGCAAGGCTCTGATCC
GCCCTTGTCCCAAATGCAACGTGAAGATTGTCAAGGAGTCGGGCTGCAAC
AAAATGATCTGCTCCAAGTGCCGTACTTCAATATGCTACATTTGCAAGAA
AGATATTACCCGAGAGAAGTACGACCATTTTGGGCGTCCTCCGACCTACT
GTCCTAACACCGATGACCCAAGGTTATCGTTAGAAGAGGTCGAGAAGGCC
CAAAAAGACACTATCGATGTTATATTGGCACAAAATCCCAATTTGACTGA
GGAGGAGCTGCGAGTTCCTGACGCAGAAGCAGCACAGTCGGCCACGAATA
TGCCAGGCGTCATTCCAGGTTATGGTCATGGATTCATACACCAATACGGG
CAAGCGCCAGTCCACCATAATTACGTGGGGTATCCAAGACCAGGGATGCC
AGTTGGAAGAGCCAACCCCCCAGCTGTTGTTCGATTTGATGCACCCGTAG
GCATTGGAAATGGCTGGGGTGGACAAGACTGGCCTCCGAACCCAGTAGGA
CAACCTAGGAACCCACCAGGGGGTCCTGCGCCCCCAAACGTTCCTGTGTA
CGGAGGCTTCGTAAACAGGGGCGTGAACTATCAAGGCAATCCTGGCCAAA
ATCAGACAAAAAGGGCAGATACCCGCCCCCCATGGCGGTACTAGAACCGG
ACTGCTAGCTCAAGAATTTGAATGGATGCCGCTAAAGCATATTCGGGATG
TTCTGACCGACAAAAAAGAGCTATTCTCAGCGTATCTCACTCTGCATTCT
CAGGAGAATGAACAGACGGGAAAGTACACAAAGTTGAAAAGCAAAAGGGT
CTCGATAGCAGCAAACCTACCACAAGGCGACGAGGAGGTATCTATCGCCG
AGAACCTGGCTCGAGAACTAGGGGCCGCCAAGAAGAAAGCTGAAAAAGAA
GACCATGGAGGGGCCCAATTTCACCAATCCGATGTATCCATCGCTCCCTT
TAAGACTGGGATATATGAACCATGCAAATGCAGATCTTACTCTGGATGAC
AACCCTGCGCTGATTTGGGATCTGTACGGCCACGGTTACTATCCGTTGCC
TGACTACGACCAACCCATGAAGAGACAAAGGCAGTATAGTCGCGACAGCA
GTCGCAGCAGCAAACGCAGCAGCAATCATGAGTCCATAATCAGCATTCTG
GACAGTGATACTGATGGTAAAAGTCGTCACGAGTCAGGGATCGAGTCAGG
GAGCTCCTCGCGCCCATCGACCATTGCGACCACATCGACCTCGTCACGCT
CCAATACGCACTCTGAAGCAGTTTACATTGACCTCACCCTGGAGGATGAG
CTATTGTGGCAGATTACAGACATCTTTCCGGGCATCAGTCATCAGCATGT
GGAAGAGCTGATCGAACGTCATAAAAGGCCCCAAGCGCACCAGCCTGCGC
TGCCCCTGAATGCATTGAAGGAAAGCGTTATTGAAGATATCTTACAGCAT
CCTAACTACCCCATGCAAGAAAAGGTCAAGAAACGTAAGATTGAGGAGAC
GGAGGAGGAAGCTACGATACGGTATCTGCGAAATATCCCACAACGTGGTA
GCCGTGCATACCTCCAGCTAGCATGTACTTCGCAAGAAGAAGGAGGAGCA
AGAGGCTGAGATCAGAAATGAAGAAGAACACAGCCGAGCTGGAAACCTCA
TCGAATGCCAGTGTTGCTACCTCGATGTGCCAGCGAACCGATCGCTCCCT
TGTGAGGGGGAGAGCGTCCATCTCTTCTGCTTTACATGCATTCGAAAATC
TGCAGAGACCCAAGTTGGGCTTATGAAATATCAAGTTCAATGTGTCGACA
CTAGTGGCTGTCAGGCAAAGTTTTCTCGTGCGCGGCTCCAAGAAGCCCTT
GGGGAGGGTTTGATGGAAAAGCTCGACAACCTTCAGCAGCAGGATGAGAT
TCAGCAAGCTGGATTGATAGGCCTTGAAGCTTGTCCATTCTGTGAATATA
AAGCCATCTATCCTCCCGTGGAAGAGGACCGCGAGTTCGTATGCAAAAAC
CCCGAGTGCGAAATGGTCAGTTGCCGTCTTTGCCAGCAAGAAAGCCATAT
TCCCCGCACTTGCGCAGAGGCCAAAAAAGAGAAGGGTATCCCCGAACGCC
ACTTGGTTGAAGAGGCAATGAGCAAGGCTCTGATCCGCCCTTGTCCCAAA
TGCAACGTGAAGATTGTCAAGGAGTCGGGCTGCAACAAAATGATCTGCTC
CAAGTGCCGTACTTCAATATGCTACATTTGCAAGAAAGATATTACCCGAG
AGAAGTACGACCATTTTGGGCGTCCTCCGACCTACTGTCCTAACACCGAT
GACCCAAGGTTATCGTTAGAAGAGGTCGAGAAGGCCCAAAAAGACACTAT
CGATGTTATATTGGCACAAAATCCCAATTTGACTGAGGAGGAGCTGCGAG
TTCCTGACGCAGAAGCAGCACAGTCGGCCACGAATATGCCAGGCGTCATT
CCAGGTTATGGTCATGGATTCATACACCAATACGGGCAAGCGCCAGTCCA
CCATAATTACGTGGGGTATCCAAGACCAGGGATGCCAGTTGGAAGAGCCA
ACCCCCCAGCTGTTGTTCGATTTGATGCACCCGTAGGCATTGGAAATGGC
TGGGGTGGACAAGACTGGCCTCCGAACCCAGTAGGACAACCTAGGAACCC
ACCAGGGGGTCCTGCGCCCCCAAACGTTCCTGTGTACGGAGGCTTCGTAA
ACAGGGGCGTGAACTATCAAGGCAATCCTGGCCAAAATCAGACAAAAAGG
GCAGATACCCGCCCCCCATGGCGGTACTAGAACCGGACTGCTAGCTCAAG
AATTTGAATGGATGCCGCTAAAGCATATTCGGGATGTTCTGACCGACAAA
AAAGAGCTATTCTCAGCGTATCTCACTCTGCATTCTCAGGAGAATGAACA
GACGGGAAAGTACACAAAGTTGAAAAGCAAAAGGGTCTCGATAGCAGCAA
ACCTACCACAAGGCGACGAGGAGGTATCTATCGCCGAGAACCTGGCTCGA
GAACTAGGGGCCGCCAAGAAGAAAGCTGAAAAAGAAGACCATGGAGGGGC
CCAATTTCACCAATCCGATGTATCCATCGCTCCCTTTAAGACTGGGATAT
ATGAACCATGCAAATGCAGATCTTACTCTGGATGACAACCCTGCGCTGAT
TTGGGATCTGTACGGCCACGGTTACTATCCGTTGCCTGACTACGACCAAC
CCATGAAGAGACAAAGGCAGTATAGTCGCGACAGCAGTCGCAGCAGCAAA
CGCAGCAGCAATCATGAGTCCATAATCAGCATTCTGGACAGTGATACTGA
TGGTAAAAGTCGTCACGAGTCAGGGATCGAGTCAGGGAGCTCCTCGCGCC
CATCGACCATTGCGACCACATCGACCTCGTCACGCTCCAATACGCACTCT
GAAGCAGTTTACATTGACCTCACCCTGGAGGATGAGCTATTGTGGCAGAT
TACAGACATCTTTCCGGGCATCAGTCATCAGCATGTGGAAGAGCTGATCG
AACGTCATAAAAGGCCCCAAGCGCACCAGCCTGCGCTGCCCCTGAATGCA
TTGAAGGAAAGCGTTATTGAAGATATCTTACAGCATCCTAACTACCCCAT
GCAAGAAAAGGTCAAGAAACGTAAGATTGAGGAGACGGAGGAGGAAGCTA
CGATACGGTATCTGCGAAATATCCCACAACGTGGTAGCCGTGCATACCTC
CAGCTAGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004295-T1.utr3p1 | KJC3_004295-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004295-T1.utr5p1 | KJC3_004295-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002867 |
| DBxref | PFAM:PF01485 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4458754..4462577 - |
|
