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KJC3_004312-T1, KJC3_004312-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004312-T1
Unique NameKJC3_004312-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4504286..4506572-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004312-T1 ID=KJC3_004312-T1|Name=KJC3_004312-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2287bp|location=Sequence derived from alignment at ch3:4504286..4506572- (Aspergillus niger KJC3)
TTCTGTAGAATGTCCGTGTGTCTATATCTGTCTGTGGAGCACAATGGATG
CCAGGCATGATCTCCCCGAAGTACCTCGGTCTGAGCCCGTCTTTCCTCCA
ACATCACAGGAGCTTCCCTCCTCGCCGCCCTCGATAGCGTCCGATGTTGG
CTACCGACGCAAACCCAAGAAGCCTCCCCCGGTCACTCCACGATCATTCC
GACGGTTTTTTACGCCTCGCTCCATGCTGGATGGAGGGAACAGTGCAAGC
TCAGTGAGAACCAATCGTCAGGCTTTGAAAGCCCTCAGCTCCCCTGCCGT
CAATCGCCTGGGGCCCGCCTTTACAAGGACATCCAAAGCTGTTGAACATA
GACCAGAAGCACCCGACTTCACACGAACACCGACCCGGAAACGGAAGCTT
TGGTTCTCTTCAATTGGTTCTCCGTTGCAGTCTTCGCCGCTTAAAAAGGT
CCAGGTTCGCCATGCAGCCCAGAATGACGAAGAAGTAGCTGTACCAGTTC
GAGACATCCAGCTCAAGATTGAATCGAGGGTTGATGATGTCAAGCCAACT
GCTGTCACAAAACCTACTCGACAGGTTCTGCCAGTCCGTCGGTCGCAGGC
CTTGCAATCGTCGGGAACGCTGTATATGCGAAGCCTTTCGGGGTCTCGGG
CGAATAGAGTGACTATACGGTCTAATTCAGGAGCTGGTAGGTTGCACATG
CCTCTATTTTTGTAACGATATACTCATAGTCCTTGAAGGCTGGCAGGACC
TGACGTCAAACTTCTATTCACGACCAAATGATAGCCACAACTGCGCCAAT
ATTTCTGGTGACCGCTACGTCTTGCCGTTCTGCACGGCTTCATGCAATAG
TGGGTGACAACAGGATTGCTTTCTGTCTGCGTGTACTTACTGACTGGCTC
AACAGCCAATAGTCTTATTGCAGTAGGAGATGAGGAGGGAGGCATTCGAT
TGTTAGATTCTGCCAAAGACGACAAGAGCGGCTTTTCTCGAGCATACCTT
ACGTTCCGCCCGCATACGAATTCGATCATGGACCTGCAGTTTTCGTCCGA
TGATATGCTACTTGCAACAGCCTCTGGAGACCAAACAGCACTAGTCATCG
ACATGGCCACTCAGACGCCGGTATATTGCCTATCCAACCATGTGTCCTCC
GTCAAGCAGGTTCAGTTCCAACCAGCGGCCAACAACAAAGTCCTTGCGAC
CTGCAGTCGTGATGGCAATGTCAACATATGGGATCTCCGATGCAAAGGAT
TTGACAGACCTAGTCTGCAGGCGCGGTGCTCGCTTGAATCTGACGCAGAA
TCGACTGCTGGCTCCATCACCTCCAAGACCGCCTTTCCTCAGGTATTGAG
TACTATTCACGGCGCTCATGCATGGACGTCGCAAACAGGCGTGTCACCAG
AGAAAATGGAACCTCAAGTTCGCCGTTCAGACATTACCGTAACCTCTTTG
GCCTTCCTTCCGCAAGGTCGCGAGAACCTTTTTGTCACAGCTTCGAGTAC
GAACTCCTGCGTGAGGTTGTGGGATCTGCGTACAGCACACAACAACCGTC
GTGGCCGTCCAGTTCTTCCTCTGGCTACCACCAGACAGCCAGATAGCCAC
ATCAAATACCGGGGCTTTGCCGTCACGTCAATGGCCTTGGGCGGAGATGG
TGCAAGACTATACACGCTGTGTCGGGATGGCACTGTGTACACCTACTCAA
CGTCACATCTGGTCCTGGGAAGTGCCCCCGAGCTCTCTCTGAACAACAAC
CGACCACGTCGCACCGGTGGGTCTGACAAGGAAGGGCTGGGGCCTCTATA
TGGCTTCCGTCATCCACGTCTTCAGGTTGCAACCTTCTATGTTAAAGTTG
GGGTTCGCAAAGCCACAGGCGACAAACCGGAGATGCTAGCTGCCGGGAGT
GCCGACAACTGTGCCGTCCTCTTTCCAACAGATGAGCGCTTCCTCTCCAA
TGATCAGAAGACGACCACTGAGGATGATTTTCTACCCCCGATGCCGTCAT
CAGCTACCCGCTCCGGCCTCCGTCGCACATACTCCGGACGGGTAGAAGAC
ACCATTCCCATCTACCAGTCCGGAACACCCCTTGTTGGAGGCCATGTGAA
AGAAGTCTCCGCCGTGTCATGGACTGCCGATGGAGAACTTGTTACCGTTA
GCGACGACTACACCGCCCGATGCTGGCGCGAAGGACCTGAAGCCCGAGAC
CTCAGAACCAGTGGAGAGGCAGAAGGAAAGAGATGGCGCAGTGGCTGGGC
AGAGACCCCAGACTCCTATGATGACGAAGAAGAATGA
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Coding sequence (CDS) from alignment at ch3:4504286..4506572-

>KJC3_004312-T1 ID=KJC3_004312-T1|Name=KJC3_004312-T1|organism=Aspergillus niger KJC3|type=CDS|length=6408bp|location=Sequence derived from alignment at ch3:4504286..4506572- (Aspergillus niger KJC3)
CCAATAGTCTTATTGCAGTAGGAGATGAGGAGGGAGGCATTCGATTGTTA
GATTCTGCCAAAGACGACAAGAGCGGCTTTTCTCGAGCATACCTTACGTT
CCGCCCGCATACGAATTCGATCATGGACCTGCAGTTTTCGTCCGATGATA
TGCTACTTGCAACAGCCTCTGGAGACCAAACAGCACTAGTCATCGACATG
GCCACTCAGACGCCGGTATATTGCCTATCCAACCATGTGTCCTCCGTCAA
GCAGGTTCAGTTCCAACCAGCGGCCAACAACAAAGTCCTTGCGACCTGCA
GTCGTGATGGCAATGTCAACATATGGGATCTCCGATGCAAAGGATTTGAC
AGACCTAGTCTGCAGGCGCGGTGCTCGCTTGAATCTGACGCAGAATCGAC
TGCTGGCTCCATCACCTCCAAGACCGCCTTTCCTCAGGTATTGAGTACTA
TTCACGGCGCTCATGCATGGACGTCGCAAACAGGCGTGTCACCAGAGAAA
ATGGAACCTCAAGTTCGCCGTTCAGACATTACCGTAACCTCTTTGGCCTT
CCTTCCGCAAGGTCGCGAGAACCTTTTTGTCACAGCTTCGAGTACGAACT
CCTGCGTGAGGTTGTGGGATCTGCGTACAGCACACAACAACCGTCGTGGC
CGTCCAGTTCTTCCTCTGGCTACCACCAGACAGCCAGATAGCCACATCAA
ATACCGGGGCTTTGCCGTCACGTCAATGGCCTTGGGCGGAGATGGTGCAA
GACTATACACGCTGTGTCGGGATGGCACTGTGTACACCTACTCAACGTCA
CATCTGGTCCTGGGAAGTGCCCCCGAGCTCTCTCTGAACAACAACCGACC
ACGTCGCACCGGTGGGTCTGACAAGGAAGGGCTGGGGCCTCTATATGGCT
TCCGTCATCCACGTCTTCAGGTTGCAACCTTCTATGTTAAAGTTGGGGTT
CGCAAAGCCACAGGCGACAAACCGGAGATGCTAGCTGCCGGGAGTGCCGA
CAACTGTGCCGTCCTCTTTCCAACAGATGAGCGCTTCCTCTCCAATGATC
AGAAGACGACCACTGAGGATGATTTTCTACCCCCGATGCCGTCATCAGCT
ACCCGCTCCGGCCTCCGTCGCACATACTCCGGACGGGTAGAAGACACCAT
TCCCATCTACCAGTCCGGAACACCCCTTGTTGGAGGCCATGTGAAAGAAG
TCTCCGCCGTGTCATGGACTGCCGATGGAGAACTTGTTACCGTTAGCGAC
GACTACACCGCCCGATGCTGGCGCGAAGGACCTGAAGCCCGAGACCTCAG
AACCAGTGGAGAGGCAGAAGGAAAGAGATGGCGCAGTGGCTGGGCAGAGA
CCCCAGACTCCTATGATGACGAAGAAGAATGAGCTGGCAGGACCTGACGT
CAAACTTCTATTCACGACCAAATGATAGCCACAACTGCGCCAATATTTCT
GGTGACCGCTACGTCTTGCCGTTCTGCACGGCTTCATGCAATAATGGATG
CCAGGCATGATCTCCCCGAAGTACCTCGGTCTGAGCCCGTCTTTCCTCCA
ACATCACAGGAGCTTCCCTCCTCGCCGCCCTCGATAGCGTCCGATGTTGG
CTACCGACGCAAACCCAAGAAGCCTCCCCCGGTCACTCCACGATCATTCC
GACGGTTTTTTACGCCTCGCTCCATGCTGGATGGAGGGAACAGTGCAAGC
TCAGTGAGAACCAATCGTCAGGCTTTGAAAGCCCTCAGCTCCCCTGCCGT
CAATCGCCTGGGGCCCGCCTTTACAAGGACATCCAAAGCTGTTGAACATA
GACCAGAAGCACCCGACTTCACACGAACACCGACCCGGAAACGGAAGCTT
TGGTTCTCTTCAATTGGTTCTCCGTTGCAGTCTTCGCCGCTTAAAAAGGT
CCAGGTTCGCCATGCAGCCCAGAATGACGAAGAAGTAGCTGTACCAGTTC
GAGACATCCAGCTCAAGATTGAATCGAGGGTTGATGATGTCAAGCCAACT
GCTGTCACAAAACCTACTCGACAGGTTCTGCCAGTCCGTCGGTCGCAGGC
CTTGCAATCGTCGGGAACGCTGTATATGCGAAGCCTTTCGGGGTCTCGGG
CGAATAGAGTGACTATACGGTCTAATTCAGGAGCTGCCAATAGTCTTATT
GCAGTAGGAGATGAGGAGGGAGGCATTCGATTGTTAGATTCTGCCAAAGA
CGACAAGAGCGGCTTTTCTCGAGCATACCTTACGTTCCGCCCGCATACGA
ATTCGATCATGGACCTGCAGTTTTCGTCCGATGATATGCTACTTGCAACA
GCCTCTGGAGACCAAACAGCACTAGTCATCGACATGGCCACTCAGACGCC
GGTATATTGCCTATCCAACCATGTGTCCTCCGTCAAGCAGGTTCAGTTCC
AACCAGCGGCCAACAACAAAGTCCTTGCGACCTGCAGTCGTGATGGCAAT
GTCAACATATGGGATCTCCGATGCAAAGGATTTGACAGACCTAGTCTGCA
GGCGCGGTGCTCGCTTGAATCTGACGCAGAATCGACTGCTGGCTCCATCA
CCTCCAAGACCGCCTTTCCTCAGGTATTGAGTACTATTCACGGCGCTCAT
GCATGGACGTCGCAAACAGGCGTGTCACCAGAGAAAATGGAACCTCAAGT
TCGCCGTTCAGACATTACCGTAACCTCTTTGGCCTTCCTTCCGCAAGGTC
GCGAGAACCTTTTTGTCACAGCTTCGAGTACGAACTCCTGCGTGAGGTTG
TGGGATCTGCGTACAGCACACAACAACCGTCGTGGCCGTCCAGTTCTTCC
TCTGGCTACCACCAGACAGCCAGATAGCCACATCAAATACCGGGGCTTTG
CCGTCACGTCAATGGCCTTGGGCGGAGATGGTGCAAGACTATACACGCTG
TGTCGGGATGGCACTGTGTACACCTACTCAACGTCACATCTGGTCCTGGG
AAGTGCCCCCGAGCTCTCTCTGAACAACAACCGACCACGTCGCACCGGTG
GGTCTGACAAGGAAGGGCTGGGGCCTCTATATGGCTTCCGTCATCCACGT
CTTCAGGTTGCAACCTTCTATGTTAAAGTTGGGGTTCGCAAAGCCACAGG
CGACAAACCGGAGATGCTAGCTGCCGGGAGTGCCGACAACTGTGCCGTCC
TCTTTCCAACAGATGAGCGCTTCCTCTCCAATGATCAGAAGACGACCACT
GAGGATGATTTTCTACCCCCGATGCCGTCATCAGCTACCCGCTCCGGCCT
CCGTCGCACATACTCCGGACGGGTAGAAGACACCATTCCCATCTACCAGT
CCGGAACACCCCTTGTTGGAGGCCATGTGAAAGAAGTCTCCGCCGTGTCA
TGGACTGCCGATGGAGAACTTGTTACCGTTAGCGACGACTACACCGCCCG
ATGCTGGCGCGAAGGACCTGAAGCCCGAGACCTCAGAACCAGTGGAGAGG
CAGAAGGAAAGAGATGGCGCAGTGGCTGGGCAGAGACCCCAGACTCCTAT
GATGACGAAGAAGAATGAGCTGGCAGGACCTGACGTCAAACTTCTATTCA
CGACCAAATGATAGCCACAACTGCGCCAATATTTCTGGTGACCGCTACGT
CTTGCCGTTCTGCACGGCTTCATGCAATAATGGATGCCAGGCATGATCTC
CCCGAAGTACCTCGGTCTGAGCCCGTCTTTCCTCCAACATCACAGGAGCT
TCCCTCCTCGCCGCCCTCGATAGCGTCCGATGTTGGCTACCGACGCAAAC
CCAAGAAGCCTCCCCCGGTCACTCCACGATCATTCCGACGGTTTTTTACG
CCTCGCTCCATGCTGGATGGAGGGAACAGTGCAAGCTCAGTGAGAACCAA
TCGTCAGGCTTTGAAAGCCCTCAGCTCCCCTGCCGTCAATCGCCTGGGGC
CCGCCTTTACAAGGACATCCAAAGCTGTTGAACATAGACCAGAAGCACCC
GACTTCACACGAACACCGACCCGGAAACGGAAGCTTTGGTTCTCTTCAAT
TGGTTCTCCGTTGCAGTCTTCGCCGCTTAAAAAGGTCCAGGTTCGCCATG
CAGCCCAGAATGACGAAGAAGTAGCTGTACCAGTTCGAGACATCCAGCTC
AAGATTGAATCGAGGGTTGATGATGTCAAGCCAACTGCTGTCACAAAACC
TACTCGACAGGTTCTGCCAGTCCGTCGGTCGCAGGCCTTGCAATCGTCGG
GAACGCTGTATATGCGAAGCCTTTCGGGGTCTCGGGCGAATAGAGTGACT
ATACGGTCTAATTCAGGAGCTGCCAATAGTCTTATTGCAGTAGGAGATGA
GGAGGGAGGCATTCGATTGTTAGATTCTGCCAAAGACGACAAGAGCGGCT
TTTCTCGAGCATACCTTACGTTCCGCCCGCATACGAATTCGATCATGGAC
CTGCAGTTTTCGTCCGATGATATGCTACTTGCAACAGCCTCTGGAGACCA
AACAGCACTAGTCATCGACATGGCCACTCAGACGCCGGTATATTGCCTAT
CCAACCATGTGTCCTCCGTCAAGCAGGTTCAGTTCCAACCAGCGGCCAAC
AACAAAGTCCTTGCGACCTGCAGTCGTGATGGCAATGTCAACATATGGGA
TCTCCGATGCAAAGGATTTGACAGACCTAGTCTGCAGGCGCGGTGCTCGC
TTGAATCTGACGCAGAATCGACTGCTGGCTCCATCACCTCCAAGACCGCC
TTTCCTCAGGTATTGAGTACTATTCACGGCGCTCATGCATGGACGTCGCA
AACAGGCGTGTCACCAGAGAAAATGGAACCTCAAGTTCGCCGTTCAGACA
TTACCGTAACCTCTTTGGCCTTCCTTCCGCAAGGTCGCGAGAACCTTTTT
GTCACAGCTTCGAGTACGAACTCCTGCGTGAGGTTGTGGGATCTGCGTAC
AGCACACAACAACCGTCGTGGCCGTCCAGTTCTTCCTCTGGCTACCACCA
GACAGCCAGATAGCCACATCAAATACCGGGGCTTTGCCGTCACGTCAATG
GCCTTGGGCGGAGATGGTGCAAGACTATACACGCTGTGTCGGGATGGCAC
TGTGTACACCTACTCAACGTCACATCTGGTCCTGGGAAGTGCCCCCGAGC
TCTCTCTGAACAACAACCGACCACGTCGCACCGGTGGGTCTGACAAGGAA
GGGCTGGGGCCTCTATATGGCTTCCGTCATCCACGTCTTCAGGTTGCAAC
CTTCTATGTTAAAGTTGGGGTTCGCAAAGCCACAGGCGACAAACCGGAGA
TGCTAGCTGCCGGGAGTGCCGACAACTGTGCCGTCCTCTTTCCAACAGAT
GAGCGCTTCCTCTCCAATGATCAGAAGACGACCACTGAGGATGATTTTCT
ACCCCCGATGCCGTCATCAGCTACCCGCTCCGGCCTCCGTCGCACATACT
CCGGACGGGTAGAAGACACCATTCCCATCTACCAGTCCGGAACACCCCTT
GTTGGAGGCCATGTGAAAGAAGTCTCCGCCGTGTCATGGACTGCCGATGG
AGAACTTGTTACCGTTAGCGACGACTACACCGCCCGATGCTGGCGCGAAG
GACCTGAAGCCCGAGACCTCAGAACCAGTGGAGAGGCAGAAGGAAAGAGA
TGGCGCAGTGGCTGGGCAGAGACCCCAGACTCCTATGATGACGAAGAAGA
ATGAGCTGGCAGGACCTGACGTCAAACTTCTATTCACGACCAAATGATAG
CCACAACTGCGCCAATATTTCTGGTGACCGCTACGTCTTGCCGTTCTGCA
CGGCTTCATGCAATAATGGATGCCAGGCATGATCTCCCCGAAGTACCTCG
GTCTGAGCCCGTCTTTCCTCCAACATCACAGGAGCTTCCCTCCTCGCCGC
CCTCGATAGCGTCCGATGTTGGCTACCGACGCAAACCCAAGAAGCCTCCC
CCGGTCACTCCACGATCATTCCGACGGTTTTTTACGCCTCGCTCCATGCT
GGATGGAGGGAACAGTGCAAGCTCAGTGAGAACCAATCGTCAGGCTTTGA
AAGCCCTCAGCTCCCCTGCCGTCAATCGCCTGGGGCCCGCCTTTACAAGG
ACATCCAAAGCTGTTGAACATAGACCAGAAGCACCCGACTTCACACGAAC
ACCGACCCGGAAACGGAAGCTTTGGTTCTCTTCAATTGGTTCTCCGTTGC
AGTCTTCGCCGCTTAAAAAGGTCCAGGTTCGCCATGCAGCCCAGAATGAC
GAAGAAGTAGCTGTACCAGTTCGAGACATCCAGCTCAAGATTGAATCGAG
GGTTGATGATGTCAAGCCAACTGCTGTCACAAAACCTACTCGACAGGTTC
TGCCAGTCCGTCGGTCGCAGGCCTTGCAATCGTCGGGAACGCTGTATATG
CGAAGCCTTTCGGGGTCTCGGGCGAATAGAGTGACTATACGGTCTAATTC
AGGAGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004312KJC3_004312Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004312-T1KJC3_004312-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004312-T1.cdsKJC3_004312-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004312-T1.exon3KJC3_004312-T1.exon3Aspergillus niger KJC3exon
KJC3_004312-T1.exon2KJC3_004312-T1.exon2Aspergillus niger KJC3exon
KJC3_004312-T1.exon1KJC3_004312-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004312-T1.utr5p1KJC3_004312-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4504286..4506572 -
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