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KJC3_004318-T1, KJC3_004318-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004318-T1
Unique NameKJC3_004318-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4524655..4527770-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004318-T1 ID=KJC3_004318-T1|Name=KJC3_004318-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3116bp|location=Sequence derived from alignment at ch3:4524655..4527770- (Aspergillus niger KJC3)
CCCGTGACTGGGCAATCCCACCTCCGAAGAGCATCAACACTTTTTTCCCC
TCCTTCTACCATCTCAGCTTTGCGCTTGTCCTTTCTTCCTTTGTCTAGCC
TCTTTCTCTATCCCCTTATTTAGCTCGCTGGGATTCCCATCTCCCACATC
TTGCTATCTATCTCACCTTCTTCTTTCCCCCCACTCTTTTTCTCTCCTCA
TCTCTTAAGCTAATCCACCCGGTTGTGGTGCGCTTTGTTTTCACCCCTCT
GTGTCCCAAGCAACCATGGCCGAGCGCTATATCCCCGAACATCGTCGCAC
TCAGTTCAAGGCCCGGAACCAGTTCCGGCCTGACGAGCTTCGTCGTCGTC
GTGAGGAACAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTG
GCCAAGAGGAGAGGTATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGG
CGGCGTAGCTGCCGAGAGTGATGATGAGGCCAGCGCCATCGAGAGTGAGG
TATGCAGTTCCTGCATTTCTTTTTTGTTTGTATCTCATTGTTCGATCTCT
TTGTTCCTTTCCCGACCGGGAGCTGGGCCCATCGGCTGCCCGTTTTCGAA
TCTTTCTTTCTGGTCGCTCTTGCTTGTCCAGATGCGTCCCAGCGAGAGCT
TTTCACCGCTTTGCCGCCGGGCGAGCCCTCATTCGGCTCTGACTGGACAA
GCACACGACCAGCATCATCAAGACTCCCTTCGCGCTCAGCCAAGATGTAT
TCATTACTGTGCAAAATAGCTAATGGATGGTTTTCTAGCTTAATGTGGAG
CTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCAGATCGACCAGCAGAT
CCAAGCCACCACCAAGTTCAGGAAATTGCTCTCCAAGGAGCGCAACCCCC
CCATTGAGCGTGTCATCGAGACCGGTGTCGTGAGCCGCTTCGTTGAATTC
CTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGCTGCTTGGGCTTTGAC
CAACATTGCCTCTGGTTCCGCCCAACAGACCCAGGTCGTTATCGAGGCTG
GTGCTGTACCGATCTTCTGCGAACTCCTGAGCAGCCCTGAACCCGATGTT
CGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGCGGGTGACAGCCCTCA
ATGCCGTGACTTCGTTCTCAACGCCGGTGCTCTGCGTCCTCTGCTGAACC
TCATCAACGATGGCCGGAAGCTGAGCATGCTGCGCAACGCTACCTGGACC
CTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCCTGATTGGAACACTGT
ATGTCATCCTATCTGCTCATCCTAACGAGCTTTTGTCGCTAACATTGGAT
TTAAAAGATTGCCCCCGCTCTTCCTGTCCTTGCTAAGCTCATCTACATGC
TTGATGATGAAGTCCTGATCGATGCTTGCTGGGCCATCTCCTACCTGTCT
GATGGCGCCAACGACAAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCG
CCGTCTCGTCGAGCTCCTCATGCACGCCTCGACCTCGGTCCAGACCCCCG
CTCTCCGGTCGGTCGGTAACATCGTCACTGGTGACGACGTCCAGACCCAG
GTCATCATCAACTGCGGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTC
CACCAAGGACGGTATCCGTAAGGAGGCGTGCTGGACCATCTCCAACATCA
CTGCTGGTAACTCCAGCCAGATCCAGGCTGTCGTCGACGCCGGCATCATC
CCTCCCTTGATCAACCTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGA
GGCCTGCTGGGCCATCTCCAACGCCACCTCCGGTGGTCTGCAGAAGCCTG
ACCAGATCCGCTACCTCGTGTCCCAGGGATGCATCAAGCCCCTGTGCGAC
CTTCTTGCTTGCCCTGACAACAAGATCATCCAGGTTGCTCTGGATGGTCT
GGAGAACATCCTCAAGGTCGGCGAGATGGACAAGGAGGCTGGCCAGTCTG
AGGCCAACGTCAACCGCTACGCTCTGTTCATCGAAGAGGCCGGTGGTATG
GAGAAGATCCATGACTGCCAGAACAACGCCAACGAGGAGATCTACATGAA
GGCATACAACATCATCGAGAAGTACTTCTCTGATGAGGACGAGGCTGGTG
ACATTGATGAGGTTGCTCCTCAGCAGACCCAGACTGGATTCGCCCTCGGC
ACCACGCAACAGCAGGGCGGATTCAACTTCGCCAACGGTGGTGACTCCAT
GGATATGTAAAAGAAGAAACAAAATTGACACGCATTTTACTGGCAATGAA
ACCATGACCCACATGAGAGATCTGCACCCATCTATTTCGATTCTACTTCC
TCGCTAGATCTACACCTGGCGGTTACCACGCCGCCATGTGGACCCTCAAC
CTCGAGTTCGTGGAGGCCCTGGGACGGGATATTCACCTCATTTTTCCAGG
CTTCTCGTGACTCAAGAACAGCGGTGTCTAATGTGGCTTCTCGCCATCCT
TGTTGGAGTAACTTCGCAGTCTCTTCAGACCCTTTCTTGTTTTGCCCTCC
CAGGTTTCCACATTCTTACCCCCTTCTGTCCTCCCCCTCACCCATTTCCC
TTTTCCCTTCCCGTATCATGATTTCTCCCCCTCTGTTTTGACCATCACGA
ACGATAAAGATTCACCATCATGTATCCCTTTTTATACGTGCCCATCACTC
TGGTACCACCCCGTAGCATCCCTCATACACAGGCGTATTTGTTTTATTTC
GGTCTCATTCTTGTTCATTTCCTCTGGATGTTCCCTTCGGTTGTGATTTG
TTTTGCGGGCCTAGGTGCTCTCCGTCCCCTTCCGCCTAGAGAGACAAAAA
TAAAGGAATACTACTAGGCGTTGGTGTCGGCATATGCAGGCCACTGGCTC
TGTCCCTGGATGTGGTTTGGTTTCCTTAGAGATACAGGAACAAACCTAGT
ATAACTCAACGAGATCCAACAGACTCAGCCATGATGGATAGTAGACCTAG
CCCTTAAAATTGACAGTTTTCTTTTCACCACACTTACGTCTTTTTACGAG
TATCCAAAACTTTTTTGGAACTTCCAAGTAGTCAACTCCATGAAACAAAA
TAGTCTATATATACAC
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Coding sequence (CDS) from alignment at ch3:4524655..4527770-

>KJC3_004318-T1 ID=KJC3_004318-T1|Name=KJC3_004318-T1|organism=Aspergillus niger KJC3|type=CDS|length=4941bp|location=Sequence derived from alignment at ch3:4524655..4527770- (Aspergillus niger KJC3)
ATTGCCCCCGCTCTTCCTGTCCTTGCTAAGCTCATCTACATGCTTGATGA
TGAAGTCCTGATCGATGCTTGCTGGGCCATCTCCTACCTGTCTGATGGCG
CCAACGACAAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCGCCGTCTC
GTCGAGCTCCTCATGCACGCCTCGACCTCGGTCCAGACCCCCGCTCTCCG
GTCGGTCGGTAACATCGTCACTGGTGACGACGTCCAGACCCAGGTCATCA
TCAACTGCGGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTCCACCAAG
GACGGTATCCGTAAGGAGGCGTGCTGGACCATCTCCAACATCACTGCTGG
TAACTCCAGCCAGATCCAGGCTGTCGTCGACGCCGGCATCATCCCTCCCT
TGATCAACCTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGAGGCCTGC
TGGGCCATCTCCAACGCCACCTCCGGTGGTCTGCAGAAGCCTGACCAGAT
CCGCTACCTCGTGTCCCAGGGATGCATCAAGCCCCTGTGCGACCTTCTTG
CTTGCCCTGACAACAAGATCATCCAGGTTGCTCTGGATGGTCTGGAGAAC
ATCCTCAAGGTCGGCGAGATGGACAAGGAGGCTGGCCAGTCTGAGGCCAA
CGTCAACCGCTACGCTCTGTTCATCGAAGAGGCCGGTGGTATGGAGAAGA
TCCATGACTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCATAC
AACATCATCGAGAAGTACTTCTCTGATGAGGACGAGGCTGGTGACATTGA
TGAGGTTGCTCCTCAGCAGACCCAGACTGGATTCGCCCTCGGCACCACGC
AACAGCAGGGCGGATTCAACTTCGCCAACGGTGGTGACTCCATGGATATG
TAACTTAATGTGGAGCTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCA
GATCGACCAGCAGATCCAAGCCACCACCAAGTTCAGGAAATTGCTCTCCA
AGGAGCGCAACCCCCCCATTGAGCGTGTCATCGAGACCGGTGTCGTGAGC
CGCTTCGTTGAATTCCTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGC
TGCTTGGGCTTTGACCAACATTGCCTCTGGTTCCGCCCAACAGACCCAGG
TCGTTATCGAGGCTGGTGCTGTACCGATCTTCTGCGAACTCCTGAGCAGC
CCTGAACCCGATGTTCGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGC
GGGTGACAGCCCTCAATGCCGTGACTTCGTTCTCAACGCCGGTGCTCTGC
GTCCTCTGCTGAACCTCATCAACGATGGCCGGAAGCTGAGCATGCTGCGC
AACGCTACCTGGACCCTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCC
TGATTGGAACACTATGGCCGAGCGCTATATCCCCGAACATCGTCGCACTC
AGTTCAAGGCCCGGAACCAGTTCCGGCCTGACGAGCTTCGTCGTCGTCGT
GAGGAACAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTGGC
CAAGAGGAGAGGTATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGGCG
GCGTAGCTGCCGAGAGTGATGATGAGGCCAGCGCCATCGAGAGTGAGATT
GCCCCCGCTCTTCCTGTCCTTGCTAAGCTCATCTACATGCTTGATGATGA
AGTCCTGATCGATGCTTGCTGGGCCATCTCCTACCTGTCTGATGGCGCCA
ACGACAAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCGCCGTCTCGTC
GAGCTCCTCATGCACGCCTCGACCTCGGTCCAGACCCCCGCTCTCCGGTC
GGTCGGTAACATCGTCACTGGTGACGACGTCCAGACCCAGGTCATCATCA
ACTGCGGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTCCACCAAGGAC
GGTATCCGTAAGGAGGCGTGCTGGACCATCTCCAACATCACTGCTGGTAA
CTCCAGCCAGATCCAGGCTGTCGTCGACGCCGGCATCATCCCTCCCTTGA
TCAACCTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGAGGCCTGCTGG
GCCATCTCCAACGCCACCTCCGGTGGTCTGCAGAAGCCTGACCAGATCCG
CTACCTCGTGTCCCAGGGATGCATCAAGCCCCTGTGCGACCTTCTTGCTT
GCCCTGACAACAAGATCATCCAGGTTGCTCTGGATGGTCTGGAGAACATC
CTCAAGGTCGGCGAGATGGACAAGGAGGCTGGCCAGTCTGAGGCCAACGT
CAACCGCTACGCTCTGTTCATCGAAGAGGCCGGTGGTATGGAGAAGATCC
ATGACTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCATACAAC
ATCATCGAGAAGTACTTCTCTGATGAGGACGAGGCTGGTGACATTGATGA
GGTTGCTCCTCAGCAGACCCAGACTGGATTCGCCCTCGGCACCACGCAAC
AGCAGGGCGGATTCAACTTCGCCAACGGTGGTGACTCCATGGATATGTAA
CTTAATGTGGAGCTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCAGAT
CGACCAGCAGATCCAAGCCACCACCAAGTTCAGGAAATTGCTCTCCAAGG
AGCGCAACCCCCCCATTGAGCGTGTCATCGAGACCGGTGTCGTGAGCCGC
TTCGTTGAATTCCTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGCTGC
TTGGGCTTTGACCAACATTGCCTCTGGTTCCGCCCAACAGACCCAGGTCG
TTATCGAGGCTGGTGCTGTACCGATCTTCTGCGAACTCCTGAGCAGCCCT
GAACCCGATGTTCGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGCGGG
TGACAGCCCTCAATGCCGTGACTTCGTTCTCAACGCCGGTGCTCTGCGTC
CTCTGCTGAACCTCATCAACGATGGCCGGAAGCTGAGCATGCTGCGCAAC
GCTACCTGGACCCTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCCTGA
TTGGAACACTATGGCCGAGCGCTATATCCCCGAACATCGTCGCACTCAGT
TCAAGGCCCGGAACCAGTTCCGGCCTGACGAGCTTCGTCGTCGTCGTGAG
GAACAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTGGCCAA
GAGGAGAGGTATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGGCGGCG
TAGCTGCCGAGAGTGATGATGAGGCCAGCGCCATCGAGAGTGAGATTGCC
CCCGCTCTTCCTGTCCTTGCTAAGCTCATCTACATGCTTGATGATGAAGT
CCTGATCGATGCTTGCTGGGCCATCTCCTACCTGTCTGATGGCGCCAACG
ACAAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCGCCGTCTCGTCGAG
CTCCTCATGCACGCCTCGACCTCGGTCCAGACCCCCGCTCTCCGGTCGGT
CGGTAACATCGTCACTGGTGACGACGTCCAGACCCAGGTCATCATCAACT
GCGGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTCCACCAAGGACGGT
ATCCGTAAGGAGGCGTGCTGGACCATCTCCAACATCACTGCTGGTAACTC
CAGCCAGATCCAGGCTGTCGTCGACGCCGGCATCATCCCTCCCTTGATCA
ACCTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGAGGCCTGCTGGGCC
ATCTCCAACGCCACCTCCGGTGGTCTGCAGAAGCCTGACCAGATCCGCTA
CCTCGTGTCCCAGGGATGCATCAAGCCCCTGTGCGACCTTCTTGCTTGCC
CTGACAACAAGATCATCCAGGTTGCTCTGGATGGTCTGGAGAACATCCTC
AAGGTCGGCGAGATGGACAAGGAGGCTGGCCAGTCTGAGGCCAACGTCAA
CCGCTACGCTCTGTTCATCGAAGAGGCCGGTGGTATGGAGAAGATCCATG
ACTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCATACAACATC
ATCGAGAAGTACTTCTCTGATGAGGACGAGGCTGGTGACATTGATGAGGT
TGCTCCTCAGCAGACCCAGACTGGATTCGCCCTCGGCACCACGCAACAGC
AGGGCGGATTCAACTTCGCCAACGGTGGTGACTCCATGGATATGTAACTT
AATGTGGAGCTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCAGATCGA
CCAGCAGATCCAAGCCACCACCAAGTTCAGGAAATTGCTCTCCAAGGAGC
GCAACCCCCCCATTGAGCGTGTCATCGAGACCGGTGTCGTGAGCCGCTTC
GTTGAATTCCTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGCTGCTTG
GGCTTTGACCAACATTGCCTCTGGTTCCGCCCAACAGACCCAGGTCGTTA
TCGAGGCTGGTGCTGTACCGATCTTCTGCGAACTCCTGAGCAGCCCTGAA
CCCGATGTTCGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGCGGGTGA
CAGCCCTCAATGCCGTGACTTCGTTCTCAACGCCGGTGCTCTGCGTCCTC
TGCTGAACCTCATCAACGATGGCCGGAAGCTGAGCATGCTGCGCAACGCT
ACCTGGACCCTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCCTGATTG
GAACACTATGGCCGAGCGCTATATCCCCGAACATCGTCGCACTCAGTTCA
AGGCCCGGAACCAGTTCCGGCCTGACGAGCTTCGTCGTCGTCGTGAGGAA
CAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTGGCCAAGAG
GAGAGGTATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGGCGGCGTAG
CTGCCGAGAGTGATGATGAGGCCAGCGCCATCGAGAGTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006606protein import into nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0061608nuclear import signal receptor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004318KJC3_004318Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004318-T1KJC3_004318-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004318-T1.cdsKJC3_004318-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004318-T1.utr3p1KJC3_004318-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004318-T1.exon3KJC3_004318-T1.exon3Aspergillus niger KJC3exon
KJC3_004318-T1.exon2KJC3_004318-T1.exon2Aspergillus niger KJC3exon
KJC3_004318-T1.exon1KJC3_004318-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004318-T1.utr5p1KJC3_004318-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261OSU
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR024931
DBxrefInterPro:IPR032413
DBxrefInterPro:IPR036975
DBxrefInterPro:IPR011989
DBxrefInterPro:IPR002652
DBxrefInterPro:IPR000225
DBxrefPFAM:PF01749
DBxrefPFAM:PF13513
DBxrefPFAM:PF13646
DBxrefPFAM:PF02985
DBxrefPFAM:PF16186
DBxrefPFAM:PF00514
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4524655..4527770 -
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