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KJC3_004322-T1, KJC3_004322-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004322-T1
Unique NameKJC3_004322-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4534271..4535289-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004322-T1 ID=KJC3_004322-T1|Name=KJC3_004322-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1019bp|location=Sequence derived from alignment at ch3:4534271..4535289- (Aspergillus niger KJC3)
TCTGAATCTCACCCATAACAGCTCTGCACCGGTCACTCGCTGTGCTCGTC
AGCTAGAATCATTACTACGATGGCTGACTCTCCAACTCTGGAGCTCGACA
GCCCCACAGAACAGGATGTCGCGCCCGCAGAAGCGCAGCAGCCACCGCCC
AAGCCAGCGAAAAGAGACGCCTGTACGCTCCGAACACAAACACCGATTCA
CCCCTCTCCCTCCCCTTGCATACCAGACGCAGGAACCACTAACTGATTAT
TCCTATCTCAGTTACAGAACTACTTGCTCCGAAACCTAAACATCCCAAAC
ATGGCGATCCTAGCACCTCCAAACACACTCCTACTACCTCGAAAAGGCGA
GCCATCGGTGGCCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACCAGA
AACCTTCCCCTCCAACGTAGTAGTATACTACGACGATGATTTCGTCGTCA
TTCACGACATGTTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCACGA
GATCCTCAGAAAACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGCCGA
CTTCCTGGCAAAAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCGCGG
CTGGTGAGCTCAGACGAATACATGGGAAATACTCGGCGCAGGATAAGGAA
AGACAGGAGGCCCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCCGGG
GAGGAACTGGGAGCAAGAGATCATGTGTGGAATTCATGCGCATCCCTCCA
TGAATCACTTGCATGTGCACGTTATCTCCGTGGATCGGTTCAGCGATCGT
CTCAAGCATAGGAAACATTACAATAGCTTTTCTACACCGTTTTTCGTCAA
AATTGATGATTTCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCGATG
AACAAGGCTACCTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAGCAA
TTTGGGAACAAATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTTTGA
TGCATGGAGAAAGCTGTGA
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Coding sequence (CDS) from alignment at ch3:4534271..4535289-

>KJC3_004322-T1 ID=KJC3_004322-T1|Name=KJC3_004322-T1|organism=Aspergillus niger KJC3|type=CDS|length=1722bp|location=Sequence derived from alignment at ch3:4534271..4535289- (Aspergillus niger KJC3)
TTACAGAACTACTTGCTCCGAAACCTAAACATCCCAAACATGGCGATCCT
AGCACCTCCAAACACACTCCTACTACCTCGAAAAGGCGAGCCATCGGTGG
CCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACCAGAAACCTTCCCCT
CCAACGTAGTAGTATACTACGACGATGATTTCGTCGTCATTCACGACATG
TTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCACGAGATCCTCAGAA
AACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGCCGACTTCCTGGCAA
AAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCGCGGCTGGTGAGCTC
AGACGAATACATGGGAAATACTCGGCGCAGGATAAGGAAAGACAGGAGGC
CCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCCGGGGAGGAACTGGG
AGCAAGAGATCATGTGTGGAATTCATGCGCATCCCTCCATGAATCACTTG
CATGTGCACGTTATCTCCGTGGATCGGTTCAGCGATCGTCTCAAGCATAG
GAAACATTACAATAGCTTTTCTACACCGTTTTTCGTCAAAATTGATGATT
TCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCGATGAACAAGGCTAC
CTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAGCAATTTGGGAACAA
ATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTTTGATGCATGGAGAA
AGCTGTGAATGGCTGACTCTCCAACTCTGGAGCTCGACAGCCCCACAGAA
CAGGATGTCGCGCCCGCAGAAGCGCAGCAGCCACCGCCCAAGCCAGCGAA
AAGAGACGCCTTTACAGAACTACTTGCTCCGAAACCTAAACATCCCAAAC
ATGGCGATCCTAGCACCTCCAAACACACTCCTACTACCTCGAAAAGGCGA
GCCATCGGTGGCCCCCGAGACGGCCTAGGCGTCTACATCGCGAAACCAGA
AACCTTCCCCTCCAACGTAGTAGTATACTACGACGATGATTTCGTCGTCA
TTCACGACATGTTCCCCAAGGCAACCCTCCACCTCCTACTTCTCCCACGA
GATCCTCAGAAAACGCGCCTCCATCCATTCGAAGCCTTCGAGGACGCCGA
CTTCCTGGCAAAAGTGAAAAGGGAAACGCAGAAGCTCCGCAAACTCGCGG
CTGGTGAGCTCAGACGAATACATGGGAAATACTCGGCGCAGGATAAGGAA
AGACAGGAGGCCCTGAATGTAGAACCACCGCTGGAGGAGCTGCCGCCGGG
GAGGAACTGGGAGCAAGAGATCATGTGTGGAATTCATGCGCATCCCTCCA
TGAATCACTTGCATGTGCACGTTATCTCCGTGGATCGGTTCAGCGATCGT
CTCAAGCATAGGAAACATTACAATAGCTTTTCTACACCGTTTTTCGTCAA
AATTGATGATTTCCCACTGGCGCCGGATGATGTGCGGAGGCATCCCGATG
AACAAGGCTACCTGCGCAGGGATTTTGTCTGTTGGCGCTGTGGGAAGCAA
TTTGGGAACAAATTCGCCGAGTTGAAGCTACATTTAAAGGAGGAGTTTGA
TGCATGGAGAAAGCTGTGAATGGCTGACTCTCCAACTCTGGAGCTCGACA
GCCCCACAGAACAGGATGTCGCGCCCGCAGAAGCGCAGCAGCCACCGCCC
AAGCCAGCGAAAAGAGACGCCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004322KJC3_004322Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004322-T1KJC3_004322-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004322-T1.cdsKJC3_004322-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004322-T1.exon2KJC3_004322-T1.exon2Aspergillus niger KJC3exon
KJC3_004322-T1.exon1KJC3_004322-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004322-T1.utr5p1KJC3_004322-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001310
DBxrefInterPro:IPR036265
DBxrefInterPro:IPR032566
DBxrefPFAM:PF16278
DBxrefPFAM:PF01230
DBxrefPFAM:PF11969
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4534271..4535289 -
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