|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4547668..4549809+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004326-T1 ID=KJC3_004326-T1|Name=KJC3_004326-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2142bp|location=Sequence derived from alignment at ch3:4547668..4549809+ (Aspergillus niger KJC3)
ATGCAGGCTGTCCAGTACGAACAGCATGCTGCCCCTGGGGAGTCGCCTGC
CTACACCGACCATCGTGCGCCGCCTCAGGAACCCTCCCCCCGGAGCTCGG
TTCCTAAGAACGTCGCCTTTGAGCTACTTCTCGATGAGAACTCCAAGGTC
CGGGCCCGCATACCTATGCGGGTACAGATCTACCCTCATGACACAACGGA
TTCCATTGTGACTACGGTTAAGAATTTTTACGGCATCTACGATGGTGCTG
CGAGCGGTGTCAGCTTCGAAGACGAGCAAGGCATTACCCTCATTGCCAGG
TATGAGAATCTACGGAACAACATGACTGTTTATGTGCGGGTTATTCCCGT
CCAGGCATACACAGAGGGCTACGGTGATCGCTTTTATGGGCACCTTCCCG
CCGAGGCTCGCAAGCGTCCCAGCTTAGGGGAGCCCTTCCAGATGCCGCCG
GCAATGCCGCCGGCGCAGGTCTTGGAACACGCCCAACCACCTTCTCGCCC
GGCGTCGCGGCTGGCTCGGAAACGCAGTGTATCCCCGTCTGGTCGCAGCC
GTCGTAGCGCATCTCAGAACAAGCAGTCATCTCGGGTAGGCAACAAGAGT
AGAGGCTCGAGCACTCATGGCAGCTTCCACGAGGAGGGTACTCCTGGTTA
TAGCGATAGCGAGGGTGGCTACTCTGGGACGAAGAAGTCCCGAACCGAGC
AGTTTGGCAGCTCAGATATCAGCATGGAAAACATCCTTCAAGATGGCCGC
CGGAAACGGCCCAAGTTTGAAAGTTCGGTTCGTGGCGGGCATCTTTTCTT
TCCCCGTCTCTGTTGAAACAATATTTACTAACGTTGAGTCTTTGTCTCCT
TTCAGGAATTGCCTTTGTTCGTCCCTCCCCAGGTCCCGCTCACAACCTCC
ACGTCGTCGATCTCGCCCCAGCGCCGGTCAATCGGTCAGGAAGGGGCCAT
CTCACCTTTCGCACGCCCCACCCAGCGCCCTTACAACCAACAACCATTGC
CGTCTCCACAGAGCTATGGATACAATGAGCAGATCTATAGCGTCAATCCG
GTGCGCAATCCGGTGTACGCCACCCCTGTGGTTCCTGAGCATGGCCACCG
GCTGCGCGACCGAACCACTACCCAGTCCTCTGGTGGGCAGTATAGCAACC
AGGCTGGTCGAGGCGGCGGCCCGGGCATCCTCCCCACCCCAGATCCTACC
ATTGCCAGCTGCATTTCCGACGAGGATGTTGCTATGCAACTGATTCGTCT
GGGAGACGCATCTAATTTCTCGCATGGCCGTACTTCTGCCTCCACACTTG
ATGATGCCTTCAGCGGTGCCGCTGATGCTGCATCCTCGACGGGTGCAACC
AGCGATGGTGATGACTACAGCGATGATGACGATGATCTACCCGCTCGGTC
CAAGCAGCGGCTCGACTCCAGCCCCATGCTCCCACCTGGTGCCACCAAGC
GCACACACAAGCATCTGGACGATATCCTTCCCAGCTTTGACAGCTCTGAT
GGAAGCTACGACGGTTACGACGAGGAATACCAACATGAAGAGTTGAACGA
CACCTTGGTGAGGCATGATATGGATGAGGATACTCTCTACCGGGACGCTC
CCAAGTCCAAGAAGGCTAAGACTCGGCCCACCCATGCTGTCAGCACCACC
AAGGCGCGCGGGCCCAAGCCAGCACCCGTGCGTCCGAATAAGAGCAGCAA
GCCAGCGGCCAATGGGGCCGCTCGTAAAGTCAAGGCGACGTCTACCACGG
TGGCTCAGAAGACGGCGGTATCACCGCAGATGATGAGCCCTGTGCCGGTC
CGCAAAACATCGACTTCTTCCGTCAACTTCCAGCACCAGCTCGCCGCCGA
CGAAGAGGACTTGTCGACTAAGCCGCGTTGCCAGCGATGCCGTAAGAGCA
AGAAGGGCTGCGATCGGCAGCGCCCTTGCGGCCGATGCAAGGATGCTGGT
ATCGGCATTGAAGGGTGCATCAGCGAAGACGAAGGAAACGGTCGCAAAGG
CCGCTACGGTCGTCACATGGGGGTCCCTGTCAAGAAAGCATTCGACGCCA
CTACGAACGGAGTCGAGACGCAATCCATTGTGGCCGCTATTCCGGTGACC
ACGGCGGCTAGCATGGACAAGAACAAGAAGCGCAAGCGTTAG back to topCoding sequence (CDS) from alignment at ch3:4547668..4549809+ >KJC3_004326-T1 ID=KJC3_004326-T1|Name=KJC3_004326-T1|organism=Aspergillus niger KJC3|type=CDS|length=4128bp|location=Sequence derived from alignment at ch3:4547668..4549809+ (Aspergillus niger KJC3)
ATGCAGGCTGTCCAGTACGAACAGCATGCTGCCCCTGGGGAGTCGCCTGC
CTACACCGACCATCGTGCGCCGCCTCAGGAACCCTCCCCCCGGAGCTCGG
TTCCTAAGAACGTCGCCTTTGAGCTACTTCTCGATGAGAACTCCAAGGTC
CGGGCCCGCATACCTATGCGGGTACAGATCTACCCTCATGACACAACGGA
TTCCATTGTGACTACGGTTAAGAATTTTTACGGCATCTACGATGGTGCTG
CGAGCGGTGTCAGCTTCGAAGACGAGCAAGGCATTACCCTCATTGCCAGG
TATGAGAATCTACGGAACAACATGACTGTTTATGTGCGGGTTATTCCCGT
CCAGGCATACACAGAGGGCTACGGTGATCGCTTTTATGGGCACCTTCCCG
CCGAGGCTCGCAAGCGTCCCAGCTTAGGGGAGCCCTTCCAGATGCCGCCG
GCAATGCCGCCGGCGCAGGTCTTGGAACACGCCCAACCACCTTCTCGCCC
GGCGTCGCGGCTGGCTCGGAAACGCAGTGTATCCCCGTCTGGTCGCAGCC
GTCGTAGCGCATCTCAGAACAAGCAGTCATCTCGGGTAGGCAACAAGAGT
AGAGGCTCGAGCACTCATGGCAGCTTCCACGAGGAGGGTACTCCTGGTTA
TAGCGATAGCGAGGGTGGCTACTCTGGGACGAAGAAGTCCCGAACCGAGC
AGTTTGGCAGCTCAGATATCAGCATGGAAAACATCCTTCAAGATGGCCGC
CGGAAACGGCCCAAGTTTGAAAGTTCGGAATTGCCTTTGTTCGTCCCTCC
CCAGGTCCCGCTCACAACCTCCACGTCGTCGATCTCGCCCCAGCGCCGGT
CAATCGGTCAGGAAGGGGCCATCTCACCTTTCGCACGCCCCACCCAGCGC
CCTTACAACCAACAACCATTGCCGTCTCCACAGAGCTATGGATACAATGA
GCAGATCTATAGCGTCAATCCGGTGCGCAATCCGGTGTACGCCACCCCTG
TGGTTCCTGAGCATGGCCACCGGCTGCGCGACCGAACCACTACCCAGTCC
TCTGGTGGGCAGTATAGCAACCAGGCTGGTCGAGGCGGCGGCCCGGGCAT
CCTCCCCACCCCAGATCCTACCATTGCCAGCTGCATTTCCGACGAGGATG
TTGCTATGCAACTGATTCGTCTGGGAGACGCATCTAATTTCTCGCATGGC
CGTACTTCTGCCTCCACACTTGATGATGCCTTCAGCGGTGCCGCTGATGC
TGCATCCTCGACGGGTGCAACCAGCGATGGTGATGACTACAGCGATGATG
ACGATGATCTACCCGCTCGGTCCAAGCAGCGGCTCGACTCCAGCCCCATG
CTCCCACCTGGTGCCACCAAGCGCACACACAAGCATCTGGACGATATCCT
TCCCAGCTTTGACAGCTCTGATGGAAGCTACGACGGTTACGACGAGGAAT
ACCAACATGAAGAGTTGAACGACACCTTGGTGAGGCATGATATGGATGAG
GATACTCTCTACCGGGACGCTCCCAAGTCCAAGAAGGCTAAGACTCGGCC
CACCCATGCTGTCAGCACCACCAAGGCGCGCGGGCCCAAGCCAGCACCCG
TGCGTCCGAATAAGAGCAGCAAGCCAGCGGCCAATGGGGCCGCTCGTAAA
GTCAAGGCGACGTCTACCACGGTGGCTCAGAAGACGGCGGTATCACCGCA
GATGATGAGCCCTGTGCCGGTCCGCAAAACATCGACTTCTTCCGTCAACT
TCCAGCACCAGCTCGCCGCCGACGAAGAGGACTTGTCGACTAAGCCGCGT
TGCCAGCGATGCCGTAAGAGCAAGAAGGGCTGCGATCGGCAGCGCCCTTG
CGGCCGATGCAAGGATGCTGGTATCGGCATTGAAGGGTGCATCAGCGAAG
ACGAAGGAAACGGTCGCAAAGGCCGCTACGGTCGTCACATGGGGGTCCCT
GTCAAGAAAGCATTCGACGCCACTACGAACGGAGTCGAGACGCAATCCAT
TGTGGCCGCTATTCCGGTGACCACGGCGGCTAGCATGGACAAGAACAAGA
AGCGCAAGCGTTAGATGCAGGCTGTCCAGTACGAACAGCATGCTGCCCCT
GGGGAGTCGCCTGCCTACACCGACCATCGTGCGCCGCCTCAGGAACCCTC
CCCCCGGAGCTCGGTTCCTAAGAACGTCGCCTTTGAGCTACTTCTCGATG
AGAACTCCAAGGTCCGGGCCCGCATACCTATGCGGGTACAGATCTACCCT
CATGACACAACGGATTCCATTGTGACTACGGTTAAGAATTTTTACGGCAT
CTACGATGGTGCTGCGAGCGGTGTCAGCTTCGAAGACGAGCAAGGCATTA
CCCTCATTGCCAGGTATGAGAATCTACGGAACAACATGACTGTTTATGTG
CGGGTTATTCCCGTCCAGGCATACACAGAGGGCTACGGTGATCGCTTTTA
TGGGCACCTTCCCGCCGAGGCTCGCAAGCGTCCCAGCTTAGGGGAGCCCT
TCCAGATGCCGCCGGCAATGCCGCCGGCGCAGGTCTTGGAACACGCCCAA
CCACCTTCTCGCCCGGCGTCGCGGCTGGCTCGGAAACGCAGTGTATCCCC
GTCTGGTCGCAGCCGTCGTAGCGCATCTCAGAACAAGCAGTCATCTCGGG
TAGGCAACAAGAGTAGAGGCTCGAGCACTCATGGCAGCTTCCACGAGGAG
GGTACTCCTGGTTATAGCGATAGCGAGGGTGGCTACTCTGGGACGAAGAA
GTCCCGAACCGAGCAGTTTGGCAGCTCAGATATCAGCATGGAAAACATCC
TTCAAGATGGCCGCCGGAAACGGCCCAAGTTTGAAAGTTCGGAATTGCCT
TTGTTCGTCCCTCCCCAGGTCCCGCTCACAACCTCCACGTCGTCGATCTC
GCCCCAGCGCCGGTCAATCGGTCAGGAAGGGGCCATCTCACCTTTCGCAC
GCCCCACCCAGCGCCCTTACAACCAACAACCATTGCCGTCTCCACAGAGC
TATGGATACAATGAGCAGATCTATAGCGTCAATCCGGTGCGCAATCCGGT
GTACGCCACCCCTGTGGTTCCTGAGCATGGCCACCGGCTGCGCGACCGAA
CCACTACCCAGTCCTCTGGTGGGCAGTATAGCAACCAGGCTGGTCGAGGC
GGCGGCCCGGGCATCCTCCCCACCCCAGATCCTACCATTGCCAGCTGCAT
TTCCGACGAGGATGTTGCTATGCAACTGATTCGTCTGGGAGACGCATCTA
ATTTCTCGCATGGCCGTACTTCTGCCTCCACACTTGATGATGCCTTCAGC
GGTGCCGCTGATGCTGCATCCTCGACGGGTGCAACCAGCGATGGTGATGA
CTACAGCGATGATGACGATGATCTACCCGCTCGGTCCAAGCAGCGGCTCG
ACTCCAGCCCCATGCTCCCACCTGGTGCCACCAAGCGCACACACAAGCAT
CTGGACGATATCCTTCCCAGCTTTGACAGCTCTGATGGAAGCTACGACGG
TTACGACGAGGAATACCAACATGAAGAGTTGAACGACACCTTGGTGAGGC
ATGATATGGATGAGGATACTCTCTACCGGGACGCTCCCAAGTCCAAGAAG
GCTAAGACTCGGCCCACCCATGCTGTCAGCACCACCAAGGCGCGCGGGCC
CAAGCCAGCACCCGTGCGTCCGAATAAGAGCAGCAAGCCAGCGGCCAATG
GGGCCGCTCGTAAAGTCAAGGCGACGTCTACCACGGTGGCTCAGAAGACG
GCGGTATCACCGCAGATGATGAGCCCTGTGCCGGTCCGCAAAACATCGAC
TTCTTCCGTCAACTTCCAGCACCAGCTCGCCGCCGACGAAGAGGACTTGT
CGACTAAGCCGCGTTGCCAGCGATGCCGTAAGAGCAAGAAGGGCTGCGAT
CGGCAGCGCCCTTGCGGCCGATGCAAGGATGCTGGTATCGGCATTGAAGG
GTGCATCAGCGAAGACGAAGGAAACGGTCGCAAAGGCCGCTACGGTCGTC
ACATGGGGGTCCCTGTCAAGAAAGCATTCGACGCCACTACGAACGGAGTC
GAGACGCAATCCATTGTGGCCGCTATTCCGGTGACCACGGCGGCTAGCAT
GGACAAGAACAAGAAGCGCAAGCGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4547668..4549809 + |
|
