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KJC3_004340-T1, KJC3_004340-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004340-T1
Unique NameKJC3_004340-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4598289..4599364-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004340-T1 ID=KJC3_004340-T1|Name=KJC3_004340-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1076bp|location=Sequence derived from alignment at ch3:4598289..4599364- (Aspergillus niger KJC3)
CCACTAGGCGCGACCGCCCGACGAACGGCTCTCGGGTGACCCTCTCACCC
CGTGCAACAACGCCCCAGTTGCTCAGGGCGTTAACTATGCCTCGGCTCAA
CTCGGTAGCTCCAACCTTCCCATCCATCAGTCCATCCCCTCATCTACCAT
CTATACACATTGAACTTCACCAACCCAACTTTAACACCTACCATACCTCC
AACCAATCCTACAATCCACCTATACACACGCCAACCCAACCCATAATGTC
CACCTCAATAGCGCTCAAAAAGCGCCGCCTCCGAAGCGACTACATCTATC
ACCAAACCCACCGAACAAGATGGTGAGCCTCCCCTCCTTCCCTTCCCCCA
ATAACCCCCCTCTAACAAACCCCCCAAAAAAACAGGTTCGACAACGACAT
GTACGCCCACCTCAACAACACCGTCTATGCGATGCTCTTCGACAGCATAA
TAAACACGTACCTGATCACCCACTGCGGAATGGATCCCTTCACGCACAAC
AACCCCACCCTTACGACACCCACGCCCTCCTCTTCCTCTTCCACACCCTC
CTCCTTTAAATCCTCTCAAGTGGGCATAATGGTCTCCTCCTACTGCGACT
ACTTCTCATCGGTTTCATTTCCGGATATCTTGGACCTAGGGCTGCGAGTC
ACGAAGCTGGGGAATAGCAGCGTGACGTATGAAGTTGGAGTGTTCAAGGA
AGGGGAGGAAGAGGTGAAGGTTGTTGGGGGGTATACGCATGTTTTTGTAG
CGAGGGAGACGATGAGGCCGACGAAGGAAGGGATGGAGGATGGGGTTAGG
AGGGCGTTGGAGAGGTTGCTTGTTCGTAATGGTGAGACTCCCGGGGCGAA
GTTGTGAGTAATTTAGTAGGTATGGTGAGGCCTGTTCCTGGTGAATGGGA
TGGATTGGGAGAGGGGTTGGGGAGTTGTATATAGTTGATAGAAAGGGATG
GGTATACAGAGTACTGTTATCTTAAAGTGTCCTGGTGACATTCATTGGCT
AATTCATGTTGTGGATGGGGATGTGGTGTCTCCTGTATCAGATGAGCTGG
TGTAGAGATAGATTGGACTACTGGGA
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Coding sequence (CDS) from alignment at ch3:4598289..4599364-

>KJC3_004340-T1 ID=KJC3_004340-T1|Name=KJC3_004340-T1|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at ch3:4598289..4599364- (Aspergillus niger KJC3)
GTTCGACAACGACATGTACGCCCACCTCAACAACACCGTCTATGCGATGC
TCTTCGACAGCATAATAAACACGTACCTGATCACCCACTGCGGAATGGAT
CCCTTCACGCACAACAACCCCACCCTTACGACACCCACGCCCTCCTCTTC
CTCTTCCACACCCTCCTCCTTTAAATCCTCTCAAGTGGGCATAATGGTCT
CCTCCTACTGCGACTACTTCTCATCGGTTTCATTTCCGGATATCTTGGAC
CTAGGGCTGCGAGTCACGAAGCTGGGGAATAGCAGCGTGACGTATGAAGT
TGGAGTGTTCAAGGAAGGGGAGGAAGAGGTGAAGGTTGTTGGGGGGTATA
CGCATGTTTTTGTAGCGAGGGAGACGATGAGGCCGACGAAGGAAGGGATG
GAGGATGGGGTTAGGAGGGCGTTGGAGAGGTTGCTTGTTCGTAATGGTGA
GACTCCCGGGGCGAAGTTGTGAATGCCTCGGCTCAACTCGGTAGCTCCAA
CCTTCCCATCCATCAGTCCATCCCCTCATCTACCATCTATACACATTGAA
CTTCACCAACCCAACTTTAACACCTACCATACCTCCAACCAATCCTACAA
TCCACCTATACACACGCCAACCCAACCCATAATGTCCACCTCAATAGCGC
TCAAAAAGCGCCGCCTCCGAAGCGACTACATCTATCACCAAACCCACCGA
ACAAGATGGTTCGACAACGACATGTACGCCCACCTCAACAACACCGTCTA
TGCGATGCTCTTCGACAGCATAATAAACACGTACCTGATCACCCACTGCG
GAATGGATCCCTTCACGCACAACAACCCCACCCTTACGACACCCACGCCC
TCCTCTTCCTCTTCCACACCCTCCTCCTTTAAATCCTCTCAAGTGGGCAT
AATGGTCTCCTCCTACTGCGACTACTTCTCATCGGTTTCATTTCCGGATA
TCTTGGACCTAGGGCTGCGAGTCACGAAGCTGGGGAATAGCAGCGTGACG
TATGAAGTTGGAGTGTTCAAGGAAGGGGAGGAAGAGGTGAAGGTTGTTGG
GGGGTATACGCATGTTTTTGTAGCGAGGGAGACGATGAGGCCGACGAAGG
AAGGGATGGAGGATGGGGTTAGGAGGGCGTTGGAGAGGTTGCTTGTTCGT
AATGGTGAGACTCCCGGGGCGAAGTTGTGAATGCCTCGGCTCAACTCGGT
AGCTCCAACCTTCCCATCCATCAGTCCATCCCCTCATCTACCATCTATAC
ACATTGAACTTCACCAACCCAACTTTAACACCTACCATACCTCCAACCAA
TCCTACAATCCACCTATACACACGCCAACCCAACCCATAATGTCCACCTC
AATAGCGCTCAAAAAGCGCCGCCTCCGAAGCGACTACATCTATCACCAAA
CCCACCGAACAAGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004340KJC3_004340Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004340-T1KJC3_004340-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004340-T1.cdsKJC3_004340-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004340-T1.utr3p1KJC3_004340-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004340-T1.exon2KJC3_004340-T1.exon2Aspergillus niger KJC3exon
KJC3_004340-T1.exon1KJC3_004340-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004340-T1.utr5p1KJC3_004340-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR006683
DBxrefPFAM:PF03061
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4598289..4599364 -
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