You are here

Home

KJC3_004358-T1, KJC3_004358-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004358-T1
Unique NameKJC3_004358-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4651226..4653780-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004358-T1 ID=KJC3_004358-T1|Name=KJC3_004358-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2555bp|location=Sequence derived from alignment at ch3:4651226..4653780- (Aspergillus niger KJC3)
GTTCCATTCCCTCCCTCCACTTCCGCTCTTCCCCGTCATCTCTCATTCCC
ACTTTACTCCTTTCTGGACTCGATTATAGTAGACTGTATCATCCAACTGC
TATACATTCGAGTTGTCACTGCTGCGCTGCTGACACCACACCCCTGTATA
TTCGATTATCGCCATGATTTGAATCGTCGCTCGCAACGTGGATGTCATCT
CGCTGATACTCCATACTCCATTTGACCATGGCAACACTGGCAGCCTCACC
TCCATCCTCGCCTTCGTGGCCGAAAAGACGGCCGCGGGCCTGGGCTCTCC
GCATTGAACGCTACTGCTGCACGGCAGCATCATTCTTCCCTCTGGCATTT
GTCTACAGCCTAACGACATGGGCCGTCTGGGTCGAAGCCAGTGTTGGCTT
CAAGCCGTCTGAAAGTGCTTGGATTGGTGTGTGACTGTGGTCCCTCCGTC
CCTTCATCCAACTGCTTACTGACCTGTGATGTGAGCTAGGTATCCCAAGT
TCCTTCCTCGGAATCATCCTCTATATCTGCCTCAACGCATGCTACACGGT
CGCCGTCTTCACCGATCCCGGATCCCCCCTCACTCCCAGCGGCCGCGGTC
GACATGAATATAGTGCACTTCCAGTGACCGAATTACCACAATATACCGCC
TACACCGTGAGTTCGACCGGTGGATCCCGATTCTGCAAGAAATGCCAGTG
CCCGAAACCGGATCGGGCGCACCACTGCTCGACATGCAAGCGCTGCGTGC
TGAAGATGGATCACCACTGTCCGTGGCTGGCGACCTGCGTCGGACTGTAC
AACTACAAAGCATTCCTGCTGTTCTTGATATATACGTCGATCTTCTGCTG
GGTGGATTTCATCGTCGCGGCACTGTGGATATGGACGGAGATGCTGGACG
ATAGTAAATATATCGATGTGGATAAAATGTTGCCGATCAACGTGGTGTTG
CTGGCGGTGCTCGGTGGCATTATTGGCCTGGTACTGTCGGGTTTCACCGT
CTGGCATATCAGCCTGGCTTTGCGGGGAATTACGACGATCGAATGCCTGG
AGAAGACGCGGTATGTGTCACCGTTGCGGAAAGCGCTGGATCGCCACCGC
TACGAAAATGTGCTAGGCAGCGAAGGGGGCGACCGAGAAGGATTCGGTCA
CCGGCTGCAGGACTACGGAGGGCAGATCCTCGACGCCCATGCGAATGCGA
TCCCAGGAGTGACGCGGGCGGAAGAGGGTGAGGAACCAACGCCTCCACCC
AGTGTGACACCATCCGGGATGCGGATGTCACCAGCACAGCAGGCATTGTC
GCGATCATATGCCGAGATGGAGCGCCAGCGTGAGCACGACCGGTATCAGA
ACTATTTGGATGAGGAAGACAGCGAGAAAATGCCGCACGCATTCGACCTG
GGATGGCGGCGCAATCTACGACACTTGTTCGGTGACCGCCCGCTGCTATG
GCCGGTGCCGGTGTGTACGACAACAGGCGATGGCTGGCACTGGGAGCCGA
GTGCGAAGTTCATGGAGGCGCGCGATCGCGTGCGGCAGCGACGGGAGCGG
GAGGCGGCGGAGCAACAGCAATACCAGCGGGATCTGTACCAGCGGAATAT
GAACAATGGCCATGCCTGGGGTGCATCTGCTGCTGCAGCCAACTGGACGC
CGAACCAGCCGCTGGATGTGGTGCGCGATCCGGAGCGGCCGAACACGGGG
GTGTCGATGAAGACACTAGCGCCGATGTCACCACGGCTGCGGGGGCAAGA
CAGCGAGGGAGAGATGAGCGAAGAGGAGATGCACGAACGAGAAGATGAAT
GGCGGAGCTGGGATTGATGTATACCAGTGTATACTAGGATGAATAATGTT
TAAATGCGGTAGAACTATCATGAATGCTATATACTACGGAGTCCAATGGA
ATGGTAGCGACACCTGATTAATAAGGCAGGTAAACGTCAGGCCAACTGGC
CTATCCGCATCTCCACCTTATCTATATCTCCGACTACTACTACATCACAT
CATCACATCATCACATCACCTCCCAACCAAACACCTCACCACCAATACCT
CACTCATTACAACTTACCAACCACATAATAACACAAACATCCACATCACC
AAACACCCTCGGGTGGAACCCCCAAAGACATGTCCCCTTCAACCCGCCGT
CTCCTCAAAGAGTCCGCCGACCTACAAACCAACCCATCACCCTACTTCCA
CGCCGCGCCCGTCTCCGAATCCAACCTCTTCGACTGGCACTTCACACTCC
TGGGCCCACCGCCCCCCTCTCCCTACGCAGGGGGCATCTACCACGGCCGC
ATCACTCTCCCGCCCACCTACCCGCTCCGCCCACCCAGCTTCCGGTTCCT
GACGCCTTCGGGACGATTCGAAGTCAACCGCGAGATCTGCCTCAGTATAT
CGGGCCATCATGAGGAGACGTGGCAGCCTGCATGGGGGATCCGGACGGCG
TTGATTGCGCTGAGGAGTTTCATGGATGGGGATGCGAAGGGCCAGGTGGG
TGGGTTGGATGTTGGGGAAGAGGTGAGGAGGGCGTATGCGAGGAGTAGTA
GGGGG
back to top

Coding sequence (CDS) from alignment at ch3:4651226..4653780-

>KJC3_004358-T1 ID=KJC3_004358-T1|Name=KJC3_004358-T1|organism=Aspergillus niger KJC3|type=CDS|length=3054bp|location=Sequence derived from alignment at ch3:4651226..4653780- (Aspergillus niger KJC3)
GTATCCCAAGTTCCTTCCTCGGAATCATCCTCTATATCTGCCTCAACGCA
TGCTACACGGTCGCCGTCTTCACCGATCCCGGATCCCCCCTCACTCCCAG
CGGCCGCGGTCGACATGAATATAGTGCACTTCCAGTGACCGAATTACCAC
AATATACCGCCTACACCGTGAGTTCGACCGGTGGATCCCGATTCTGCAAG
AAATGCCAGTGCCCGAAACCGGATCGGGCGCACCACTGCTCGACATGCAA
GCGCTGCGTGCTGAAGATGGATCACCACTGTCCGTGGCTGGCGACCTGCG
TCGGACTGTACAACTACAAAGCATTCCTGCTGTTCTTGATATATACGTCG
ATCTTCTGCTGGGTGGATTTCATCGTCGCGGCACTGTGGATATGGACGGA
GATGCTGGACGATAGTAAATATATCGATGTGGATAAAATGTTGCCGATCA
ACGTGGTGTTGCTGGCGGTGCTCGGTGGCATTATTGGCCTGGTACTGTCG
GGTTTCACCGTCTGGCATATCAGCCTGGCTTTGCGGGGAATTACGACGAT
CGAATGCCTGGAGAAGACGCGGTATGTGTCACCGTTGCGGAAAGCGCTGG
ATCGCCACCGCTACGAAAATGTGCTAGGCAGCGAAGGGGGCGACCGAGAA
GGATTCGGTCACCGGCTGCAGGACTACGGAGGGCAGATCCTCGACGCCCA
TGCGAATGCGATCCCAGGAGTGACGCGGGCGGAAGAGGGTGAGGAACCAA
CGCCTCCACCCAGTGTGACACCATCCGGGATGCGGATGTCACCAGCACAG
CAGGCATTGTCGCGATCATATGCCGAGATGGAGCGCCAGCGTGAGCACGA
CCGGTATCAGAACTATTTGGATGAGGAAGACAGCGAGAAAATGCCGCACG
CATTCGACCTGGGATGGCGGCGCAATCTACGACACTTGTTCGGTGACCGC
CCGCTGCTATGGCCGGTGCCGGTGTGTACGACAACAGGCGATGGCTGGCA
CTGGGAGCCGAGTGCGAAGTTCATGGAGGCGCGCGATCGCGTGCGGCAGC
GACGGGAGCGGGAGGCGGCGGAGCAACAGCAATACCAGCGGGATCTGTAC
CAGCGGAATATGAACAATGGCCATGCCTGGGGTGCATCTGCTGCTGCAGC
CAACTGGACGCCGAACCAGCCGCTGGATGTGGTGCGCGATCCGGAGCGGC
CGAACACGGGGGTGTCGATGAAGACACTAGCGCCGATGTCACCACGGCTG
CGGGGGCAAGACAGCGAGGGAGAGATGAGCGAAGAGGAGATGCACGAACG
AGAAGATGAATGGCGGAGCTGGGATTGAATGGCAACACTGGCAGCCTCAC
CTCCATCCTCGCCTTCGTGGCCGAAAAGACGGCCGCGGGCCTGGGCTCTC
CGCATTGAACGCTACTGCTGCACGGCAGCATCATTCTTCCCTCTGGCATT
TGTCTACAGCCTAACGACATGGGCCGTCTGGGTCGAAGCCAGTGTTGGCT
TCAAGCCGTCTGAAAGTGCTTGGATTGGTATCCCAAGTTCCTTCCTCGGA
ATCATCCTCTATATCTGCCTCAACGCATGCTACACGGTCGCCGTCTTCAC
CGATCCCGGATCCCCCCTCACTCCCAGCGGCCGCGGTCGACATGAATATA
GTGCACTTCCAGTGACCGAATTACCACAATATACCGCCTACACCGTGAGT
TCGACCGGTGGATCCCGATTCTGCAAGAAATGCCAGTGCCCGAAACCGGA
TCGGGCGCACCACTGCTCGACATGCAAGCGCTGCGTGCTGAAGATGGATC
ACCACTGTCCGTGGCTGGCGACCTGCGTCGGACTGTACAACTACAAAGCA
TTCCTGCTGTTCTTGATATATACGTCGATCTTCTGCTGGGTGGATTTCAT
CGTCGCGGCACTGTGGATATGGACGGAGATGCTGGACGATAGTAAATATA
TCGATGTGGATAAAATGTTGCCGATCAACGTGGTGTTGCTGGCGGTGCTC
GGTGGCATTATTGGCCTGGTACTGTCGGGTTTCACCGTCTGGCATATCAG
CCTGGCTTTGCGGGGAATTACGACGATCGAATGCCTGGAGAAGACGCGGT
ATGTGTCACCGTTGCGGAAAGCGCTGGATCGCCACCGCTACGAAAATGTG
CTAGGCAGCGAAGGGGGCGACCGAGAAGGATTCGGTCACCGGCTGCAGGA
CTACGGAGGGCAGATCCTCGACGCCCATGCGAATGCGATCCCAGGAGTGA
CGCGGGCGGAAGAGGGTGAGGAACCAACGCCTCCACCCAGTGTGACACCA
TCCGGGATGCGGATGTCACCAGCACAGCAGGCATTGTCGCGATCATATGC
CGAGATGGAGCGCCAGCGTGAGCACGACCGGTATCAGAACTATTTGGATG
AGGAAGACAGCGAGAAAATGCCGCACGCATTCGACCTGGGATGGCGGCGC
AATCTACGACACTTGTTCGGTGACCGCCCGCTGCTATGGCCGGTGCCGGT
GTGTACGACAACAGGCGATGGCTGGCACTGGGAGCCGAGTGCGAAGTTCA
TGGAGGCGCGCGATCGCGTGCGGCAGCGACGGGAGCGGGAGGCGGCGGAG
CAACAGCAATACCAGCGGGATCTGTACCAGCGGAATATGAACAATGGCCA
TGCCTGGGGTGCATCTGCTGCTGCAGCCAACTGGACGCCGAACCAGCCGC
TGGATGTGGTGCGCGATCCGGAGCGGCCGAACACGGGGGTGTCGATGAAG
ACACTAGCGCCGATGTCACCACGGCTGCGGGGGCAAGACAGCGAGGGAGA
GATGAGCGAAGAGGAGATGCACGAACGAGAAGATGAATGGCGGAGCTGGG
ATTGAATGGCAACACTGGCAGCCTCACCTCCATCCTCGCCTTCGTGGCCG
AAAAGACGGCCGCGGGCCTGGGCTCTCCGCATTGAACGCTACTGCTGCAC
GGCAGCATCATTCTTCCCTCTGGCATTTGTCTACAGCCTAACGACATGGG
CCGTCTGGGTCGAAGCCAGTGTTGGCTTCAAGCCGTCTGAAAGTGCTTGG
ATTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016409palmitoyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PFA3KJC3_004358Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004358-T1KJC3_004358-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004358-T1.cdsKJC3_004358-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004358-T1.utr3p1KJC3_004358-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004358-T1.exon2KJC3_004358-T1.exon2Aspergillus niger KJC3exon
KJC3_004358-T1.exon1KJC3_004358-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004358-T1.utr5p1KJC3_004358-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001594
DBxrefPFAM:PF01529
Productpalmitoyltransferase for Vac8p
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4651226..4653780 -
Powered by Drupal