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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4666960..4669736+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004362-T3 ID=KJC3_004362-T3|Name=KJC3_004362-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2777bp|location=Sequence derived from alignment at ch3:4666960..4669736+ (Aspergillus niger KJC3)
CGAGCAGGCCTCCTTTGGCAAGGAGTGACCGCCCCAAACGCGCATAAATA
GCCATAGCCGTCTCCCTTCTTCCAGCGACATCATCCATTCTCCTCTTTAC
CTTTTCCTGTTGCCCATCAGGCGGTTCTCATGCGCAATGACGTATTCGGG
CCTCCCTCGGAGGAAACATGCTCCAGGAGATGACAACCCTGGCCGCAAGT
CCTACCTGTACTATGCGCAGCGGCGAAAGCTGCACCTGGAAAGCGGGCCA
ACGCTACCGAAATACTCGCCAAATACCAATGTTTCTGCGGCATCAGTGAG
AGGGAAATGGGTGAGGTATCGTTCGGTTAGCTGAATCTCTAGTTTTATCA
CGGTATTACTTACTCCTGTTGTCGATAGATTCTGCACCGAGGCATGCCTG
GACCCGGACGATCTCCTAAAAAACATGACTTCAGCAGACGTCAAATCCTG
GTTCGACTGGATCGAAAAGAACTTCAAAGGGTCTATCAAAGCCCACGGCG
CGCTTGCCAACTACTGGAGAACTTTGAAGAGGCTATACTCTTTGAAAAAC
CGCCGGGAGATGGATGCAGATATGAGGAGAGATTGCCTCAACGTAGGTGA
TGGTCTCCAAGTACCGATTCATGAGATCTATCTAATGGCAAGCCCTAGTA
TATGAATGTTGTCAATTCGAGAATGGCTTTGCGTAAGCACCCACTGCCAA
AGCCGACGGGCCAGTCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCTT
GTGGATTGTGATTCGGTGTTCGCGGACGAAAAGCAGCGTCTCTACGCCCT
CTCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCGAGCCGTATCTTTTT
TTGACACGAGACACCGCGTCCAATTTCAGGCGGACGGCACGTTGGTACCT
CCTACAAATACGTCAGCTAAGGTTAGAACGCCTTTACCTTTGCCTTCCAT
CAAGGAGGCTCTGTGTGATCCAGGAACCAAAATCAGCATGGAAAGCGACG
ATTATGCGGAAGGAGGTTCGATATCCGAGACCAGCTCGTATACTGACTCG
GAAGTGGATACGGCGAGCGACAGCGATCACCAGTCGGATTGTTCTAGTGT
CACAGATGACGGGTACCTTAACGGGAATGAGGAGACGGGCACTATCCTTT
GGCGGCACGTGGAATTCTATATTATTCGTAATCCAGTGCCTGGACGTCGC
CATATCCTAGCCGCCATTGTGTCCATCCTGCATACGAAAGGGGAAGGAAG
GAAGCCTCGGCTGTAAGTCATCGAGCTAGGTGATGTGGTGTCACGGACTT
ACTTAATCGTTAGGAAGAGATATGTTATCGAGCACGAGGATAATTTGATA
TTCGATGTGTTATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTT
CGAAGCTACTATCCAAGATGTGTCCCATATATACACAGTACCAATTCCTG
ATCATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTA
TCGGTCTTCCGTGAGCCTGAACATACCCCCGAGGGCTACAGGACATCTGA
TTCGCGCCCTCTGAAGTCCAAGACCTGGAGCCGGTATGTCAAACGGATTG
GAGTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGC
GGTGCAATCAATGCCATTAACAGTAAGACCACCTTTGGTACTGCTCATTC
TTTATGGCTTACATGAACACCGATTTAGACAACGCTCCATCCTCGGTCCG
TGATCAAGTCGCTGATCACGAATCTAATGCCGTGAAATACTACCTCAATG
AGATAGTCGATTTTGATACAGCGGCAGCGTTTCACAAACGCCCATCGAAC
GAGGTCGTTCAACGTGAGCTGAGATCAGCGACCTTGCTGGCGGATAAAAC
CGCACCTATTGGATTGACGGCTGCCCAGGCTCAGAGAATCTCTAGGGACC
CTGAGGTCCGTCGTCTTCGAAGCGTCCGTCGCGCATTGACTGCGGAAATC
CGCAGCCAGGGCTATACGTTTCTGAAGGATGCCGCAGGCACCGAGATCGG
TGAGCGGAAGAAACGTGCAGATGTCGAGCTCAACAGGACACTTACAAGGC
TCCGAGAGGAGGCCAAGGAGAGGAATCGCCGAAAACACTTTCGGAAGACA
GACACGGCTATTTTCAACCAACAGTACGAGCTCGATCGGCCCTGTCATGA
GGCTAAACTACAGCCTCATGTGGCCCGGACCTACCAAATCCCCGAGCGCA
AGGAGCTCGTTGATCTGCTCTGCTATTCAACTCCCACCAAAACAGACGAT
GAAGCTCATCTTCGTCGGTTGAAATACATCCGCCTTATGGTCCGATGGCA
AGACCGGAAGGAGAGTCCTCGGCGGGGTAAGCAGTCAGCGACCATACCAA
AGCCGCAGCCAGCGAACCCTTCATCTGCCAGTGTCGTCGAAAAATTTGAC
CCACTGCAATGTCCATTTTGCCTTTCGGATACGCGCCTCTCACCTGCTGA
CCGCACGAAACGAAAGAGCAAAACAAATAAGCTCTGGGACCACGTGGAAA
GGATTCACGAGCAAGAGCTTGCAGCATTTGACTCGGGATTTCGCAAATGC
GGACTATGTGGGCTGAGGAATATTGACTTCATGCCATCTAGCGTGTCCAA
TTTTAAGAACCACACCCACACCGTCCATGGAATCAGACTCAGACCTTAGT
TTAATGCACTCAAATAGTTAAATTTGACTTTATGAAACTTGCAGAGACGT
TAGCAATTCAACAATGACGCTCTTGAC back to topCoding sequence (CDS) from alignment at ch3:4666960..4669736+ >KJC3_004362-T3 ID=KJC3_004362-T3|Name=KJC3_004362-T3|organism=Aspergillus niger KJC3|type=CDS|length=5823bp|location=Sequence derived from alignment at ch3:4666960..4669736+ (Aspergillus niger KJC3)
ATGAATGTTGTCAATTCGAGAATGGCTTTGCGTAAGCACCCACTGCCAAA
GCCGACGGGCCAGTCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCTTG
TGGATTGTGATTCGGTGTTCGCGGACGAAAAGCAGCGTCTCTACGCCCTC
TCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCGAGCCGTATCTTTTTT
TGACACGAGACACCGCGTCCAATTTCAGGCGGACGGCACGTTGGTACCTC
CTACAAATACGTCAGCTAAGGTTAGAACGCCTTTACCTTTGCCTTCCATC
AAGGAGGCTCTGTGTGATCCAGGAACCAAAATCAGCATGGAAAGCGACGA
TTATGCGGAAGGAGGTTCGATATCCGAGACCAGCTCGTATACTGACTCGG
AAGTGGATACGGCGAGCGACAGCGATCACCAGTCGGATTGTTCTAGTGTC
ACAGATGACGGGTACCTTAACGGGAATGAGGAGACGGGCACTATCCTTTG
GCGGCACGTGGAATTCTATATTATTCGTAATCCAGTGCCTGGACGTCGCC
ATATCCTAGCCGCCATTGTGTCCATCCTGCATACGAAAGGGGAAGGAAGG
AAGCCTCGGCTGAAGAGATATGTTATCGAGCACGAGGATAATTTGATATT
CGATGTGTTATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTCG
AAGCTACTATCCAAGATGTGTCCCATATATACACAGTACCAATTCCTGAT
CATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTATC
GGTCTTCCGTGAGCCTGAACATACCCCCGAGGGCTACAGGACATCTGATT
CGCGCCCTCTGAAGTCCAAGACCTGGAGCCGGTATGTCAAACGGATTGGA
GTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGCGG
TGCAATCAATGCCATTAACAACAACGCTCCATCCTCGGTCCGTGATCAAG
TCGCTGATCACGAATCTAATGCCGTGAAATACTACCTCAATGAGATAGTC
GATTTTGATACAGCGGCAGCGTTTCACAAACGCCCATCGAACGAGGTCGT
TCAACGTGAGCTGAGATCAGCGACCTTGCTGGCGGATAAAACCGCACCTA
TTGGATTGACGGCTGCCCAGGCTCAGAGAATCTCTAGGGACCCTGAGGTC
CGTCGTCTTCGAAGCGTCCGTCGCGCATTGACTGCGGAAATCCGCAGCCA
GGGCTATACGTTTCTGAAGGATGCCGCAGGCACCGAGATCGGTGAGCGGA
AGAAACGTGCAGATGTCGAGCTCAACAGGACACTTACAAGGCTCCGAGAG
GAGGCCAAGGAGAGGAATCGCCGAAAACACTTTCGGAAGACAGACACGGC
TATTTTCAACCAACAGTACGAGCTCGATCGGCCCTGTCATGAGGCTAAAC
TACAGCCTCATGTGGCCCGGACCTACCAAATCCCCGAGCGCAAGGAGCTC
GTTGATCTGCTCTGCTATTCAACTCCCACCAAAACAGACGATGAAGCTCA
TCTTCGTCGGTTGAAATACATCCGCCTTATGGTCCGATGGCAAGACCGGA
AGGAGAGTCCTCGGCGGGGTAAGCAGTCAGCGACCATACCAAAGCCGCAG
CCAGCGAACCCTTCATCTGCCAGTGTCGTCGAAAAATTTGACCCACTGCA
ATGTCCATTTTGCCTTTCGGATACGCGCCTCTCACCTGCTGACCGCACGA
AACGAAAGAGCAAAACAAATAAGCTCTGGGACCACGTGGAAAGGATTCAC
GAGCAAGAGCTTGCAGCATTTGACTCGGGATTTCGCAAATGCGGACTATG
TGGGCTGAGGAATATTGACTTCATGCCATCTAGCGTGTCCAATTTTAAGA
ACCACACCCACACCGTCCATGGAATCAGACTCAGACCTTAGATGAATGTT
GTCAATTCGAGAATGGCTTTGCGTAAGCACCCACTGCCAAAGCCGACGGG
CCAGTCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCTTGTGGATTGTG
ATTCGGTGTTCGCGGACGAAAAGCAGCGTCTCTACGCCCTCTCGGGGCTC
AATCTGTCCTGCATCTCTGCCAGTCGAGCCGTATCTTTTTTTGACACGAG
ACACCGCGTCCAATTTCAGGCGGACGGCACGTTGGTACCTCCTACAAATA
CGTCAGCTAAGGTTAGAACGCCTTTACCTTTGCCTTCCATCAAGGAGGCT
CTGTGTGATCCAGGAACCAAAATCAGCATGGAAAGCGACGATTATGCGGA
AGGAGGTTCGATATCCGAGACCAGCTCGTATACTGACTCGGAAGTGGATA
CGGCGAGCGACAGCGATCACCAGTCGGATTGTTCTAGTGTCACAGATGAC
GGGTACCTTAACGGGAATGAGGAGACGGGCACTATCCTTTGGCGGCACGT
GGAATTCTATATTATTCGTAATCCAGTGCCTGGACGTCGCCATATCCTAG
CCGCCATTGTGTCCATCCTGCATACGAAAGGGGAAGGAAGGAAGCCTCGG
CTGAAGAGATATGTTATCGAGCACGAGGATAATTTGATATTCGATGTGTT
ATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTCGAAGCTACTA
TCCAAGATGTGTCCCATATATACACAGTACCAATTCCTGATCATCGAAAG
GGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTTCCG
TGAGCCTGAACATACCCCCGAGGGCTACAGGACATCTGATTCGCGCCCTC
TGAAGTCCAAGACCTGGAGCCGGTATGTCAAACGGATTGGAGTGCGAAGT
GGCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGCGGTGCAATCAA
TGCCATTAACAACAACGCTCCATCCTCGGTCCGTGATCAAGTCGCTGATC
ACGAATCTAATGCCGTGAAATACTACCTCAATGAGATAGTCGATTTTGAT
ACAGCGGCAGCGTTTCACAAACGCCCATCGAACGAGGTCGTTCAACGTGA
GCTGAGATCAGCGACCTTGCTGGCGGATAAAACCGCACCTATTGGATTGA
CGGCTGCCCAGGCTCAGAGAATCTCTAGGGACCCTGAGGTCCGTCGTCTT
CGAAGCGTCCGTCGCGCATTGACTGCGGAAATCCGCAGCCAGGGCTATAC
GTTTCTGAAGGATGCCGCAGGCACCGAGATCGGTGAGCGGAAGAAACGTG
CAGATGTCGAGCTCAACAGGACACTTACAAGGCTCCGAGAGGAGGCCAAG
GAGAGGAATCGCCGAAAACACTTTCGGAAGACAGACACGGCTATTTTCAA
CCAACAGTACGAGCTCGATCGGCCCTGTCATGAGGCTAAACTACAGCCTC
ATGTGGCCCGGACCTACCAAATCCCCGAGCGCAAGGAGCTCGTTGATCTG
CTCTGCTATTCAACTCCCACCAAAACAGACGATGAAGCTCATCTTCGTCG
GTTGAAATACATCCGCCTTATGGTCCGATGGCAAGACCGGAAGGAGAGTC
CTCGGCGGGGTAAGCAGTCAGCGACCATACCAAAGCCGCAGCCAGCGAAC
CCTTCATCTGCCAGTGTCGTCGAAAAATTTGACCCACTGCAATGTCCATT
TTGCCTTTCGGATACGCGCCTCTCACCTGCTGACCGCACGAAACGAAAGA
GCAAAACAAATAAGCTCTGGGACCACGTGGAAAGGATTCACGAGCAAGAG
CTTGCAGCATTTGACTCGGGATTTCGCAAATGCGGACTATGTGGGCTGAG
GAATATTGACTTCATGCCATCTAGCGTGTCCAATTTTAAGAACCACACCC
ACACCGTCCATGGAATCAGACTCAGACCTTAGATGAATGTTGTCAATTCG
AGAATGGCTTTGCGTAAGCACCCACTGCCAAAGCCGACGGGCCAGTCGGA
GGATCTTTTGCAGTATCTTGTGTCCCATCTTGTGGATTGTGATTCGGTGT
TCGCGGACGAAAAGCAGCGTCTCTACGCCCTCTCGGGGCTCAATCTGTCC
TGCATCTCTGCCAGTCGAGCCGTATCTTTTTTTGACACGAGACACCGCGT
CCAATTTCAGGCGGACGGCACGTTGGTACCTCCTACAAATACGTCAGCTA
AGGTTAGAACGCCTTTACCTTTGCCTTCCATCAAGGAGGCTCTGTGTGAT
CCAGGAACCAAAATCAGCATGGAAAGCGACGATTATGCGGAAGGAGGTTC
GATATCCGAGACCAGCTCGTATACTGACTCGGAAGTGGATACGGCGAGCG
ACAGCGATCACCAGTCGGATTGTTCTAGTGTCACAGATGACGGGTACCTT
AACGGGAATGAGGAGACGGGCACTATCCTTTGGCGGCACGTGGAATTCTA
TATTATTCGTAATCCAGTGCCTGGACGTCGCCATATCCTAGCCGCCATTG
TGTCCATCCTGCATACGAAAGGGGAAGGAAGGAAGCCTCGGCTGAAGAGA
TATGTTATCGAGCACGAGGATAATTTGATATTCGATGTGTTATCACAGCT
TCTGGCGCTGGCAATACATGATGATATCTTCGAAGCTACTATCCAAGATG
TGTCCCATATATACACAGTACCAATTCCTGATCATCGAAAGGGCATCCAG
CTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTTCCGTGAGCCTGA
ACATACCCCCGAGGGCTACAGGACATCTGATTCGCGCCCTCTGAAGTCCA
AGACCTGGAGCCGGTATGTCAAACGGATTGGAGTGCGAAGTGGCCAGGAA
CGTAACCTTACACAGAAGGTGTTCCGGCGCGGTGCAATCAATGCCATTAA
CAACAACGCTCCATCCTCGGTCCGTGATCAAGTCGCTGATCACGAATCTA
ATGCCGTGAAATACTACCTCAATGAGATAGTCGATTTTGATACAGCGGCA
GCGTTTCACAAACGCCCATCGAACGAGGTCGTTCAACGTGAGCTGAGATC
AGCGACCTTGCTGGCGGATAAAACCGCACCTATTGGATTGACGGCTGCCC
AGGCTCAGAGAATCTCTAGGGACCCTGAGGTCCGTCGTCTTCGAAGCGTC
CGTCGCGCATTGACTGCGGAAATCCGCAGCCAGGGCTATACGTTTCTGAA
GGATGCCGCAGGCACCGAGATCGGTGAGCGGAAGAAACGTGCAGATGTCG
AGCTCAACAGGACACTTACAAGGCTCCGAGAGGAGGCCAAGGAGAGGAAT
CGCCGAAAACACTTTCGGAAGACAGACACGGCTATTTTCAACCAACAGTA
CGAGCTCGATCGGCCCTGTCATGAGGCTAAACTACAGCCTCATGTGGCCC
GGACCTACCAAATCCCCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTAT
TCAACTCCCACCAAAACAGACGATGAAGCTCATCTTCGTCGGTTGAAATA
CATCCGCCTTATGGTCCGATGGCAAGACCGGAAGGAGAGTCCTCGGCGGG
GTAAGCAGTCAGCGACCATACCAAAGCCGCAGCCAGCGAACCCTTCATCT
GCCAGTGTCGTCGAAAAATTTGACCCACTGCAATGTCCATTTTGCCTTTC
GGATACGCGCCTCTCACCTGCTGACCGCACGAAACGAAAGAGCAAAACAA
ATAAGCTCTGGGACCACGTGGAAAGGATTCACGAGCAAGAGCTTGCAGCA
TTTGACTCGGGATTTCGCAAATGCGGACTATGTGGGCTGAGGAATATTGA
CTTCATGCCATCTAGCGTGTCCAATTTTAAGAACCACACCCACACCGTCC
ATGGAATCAGACTCAGACCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004362-T3.utr5p1 | KJC3_004362-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004362-T3.utr3p1 | KJC3_004362-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021842 |
| DBxref | PFAM:PF11917 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4666960..4669736 + |
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