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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4792004..4795588+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004375-T5 ID=KJC3_004375-T5|Name=KJC3_004375-T5|organism=Aspergillus niger KJC3|type=mRNA|length=3585bp|location=Sequence derived from alignment at ch3:4792004..4795588+ (Aspergillus niger KJC3)
CCATCCTTGGGCCCCCGGGATAGCTTCGACGCTCCGGGTCAGATAGCGCT
TGGCGATCCGAATGCCGCATTTCCCCTCTTGCCGCCTCCCTGTCTTCTCC
TGGTTTCGAGTCTCTACAGGTCATACAGTGCCTGACGAACAACAGAACGG
AATAAGTCAAATGACTTGCCTCGGACACTGTTGACGATGTTCCGCAACAG
GTATGGTTGACATACCGGATGCCGACGATTCGCCGGCCATTCTCATACTG
ATCGGGATGTCACCCTTGCAGAAAGAATTCCCAGAAGCCAGACGACCTCC
TCATCCAGAAATTTCGAAAGACCTTCTCAGATATTGTTTCCCCAGTCGTC
CACCGCAATGCCACGCGCTTCGGTCAGACGCCCATTGGACCTATCACTCC
GACTAGGTAAAAATGCCTTTCAGCAGATGATAACCTGCTGCTACTTGTTG
TCCGTTTCCCATTCTTATTCATCAGAGACAATAGCCTGAAAAACTACGAT
CTGGGCGACAGCTAACATGATATTACTGCGCCAGGCGGGAAATGAATAAC
GATACGAAGCTCAGTGATTCTACGCCCCGCGCAACAGAAGACATGCGGTT
TCCAGCTCCCTATACCGATCCGAACGCTGTCTCTTATGTAATCCCGCTAC
AACCACATAGGAGCTCTACGCCCAATTCAGGTAGACTGGGTGCCGTGTAC
CATAGTCAAGCGGGGGAATTGCATTTTCCTGTGACGGGTCTGAGTATGAT
TACTCCGCTCTCTCTCCCGCAGCAGGTTTCTGCAGCTCCCGTCAACCCCG
AAACTGCAGCCTCAGGTCTTGATAACTTCGACCAGCAATATATTCCCCCA
CACTTCCATTGCCCCCAGCCGTTTGCTCAGCAGCCAACCTTTGCACCCAC
GGCTTTCGTTCAGAGTGATGCAGGTTACGATGCCATGGACGAGCCTGTTG
AAGAACACTCTCTAAACAATATGGATGTGCAGAGTAGCACGCCTTCTCAC
AACCTTGCATCATCAATTCAAGACGATCAAGCGAGCATTGCGAACCCAGG
TGAAACGTGAGCTATTAGAGCCTATCTCATTGCGTCTGTTTAACAGTGCT
TAACCGTTCTGGACACTGCAGTCTTCGCTATCGCATCACTTTGCGCGCAC
CTACAGCAATGATCAATGGCCAAGCCGAGATCCCAGTTACTTACCTTAAC
AAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCAT
GACTATGCGATCGATCAAATATCGAACCTATATCCGTGTGTCATTCCAAG
AAGAAGAGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAA
GGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAGT
GGAGTATGTCGATCCCATACAGGGAGGCATCAAAGAGACAAAGAACCGGC
AGGTCCAGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACT
CGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATACCTGTCCGGTTTAA
CTTCCTATCAACAGATTTCAGTCTGTCCAAGGGTGTCAAGGGTATTCCGG
TCAGATTGTGTGCGAAGACAGAAATGCTCTCCCCGGATTATGCGAGCTCA
AGCCCGAGCAGGAGGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCG
CGACCATGGGGCTGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTTAAGA
AGACCATCGAAAAGCTTCGACAACAGATTGCTCAAGCTGAGATGGGCCCC
GGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGGG
CGCTGATCCCCGCCCAGCCAAAATCAGCAAGTATAAACGGGTACGGTCCG
TGGGCTCGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCAT
GCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCAACGCGGCCGGTAAG
CGTCCTAGGATTGCGGGGTGAAGAGCAAGACGACCCGGAGTTGTACCCTG
TCATGCTGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGG
TCTCGGCTCAATATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCAG
CAGTAGCATCTCCGTGAGCTCGCCATTCCTTCCTACCAATCTGCAGTCGA
ATACGTTCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGA
AATTCACTACCATGCTCTGAAGTCCTGGGCGACATGGTCACGCTAAAGTA
TCCCGTCAAAGTACCGAAGTTCACTTCAACCGTCGGTAACGCCAACATGG
GATACATAGAGGCAGTAGACATTGACCCAAATTATCATCCACCGGCGGAG
CGACCAGTAATCTCAAGTTAAGTTACTGATTCGGTAACACCAAAGACAGG
CGAACTGACATCATCCTAGTCGCTTGTTTCTACGTACGATTTCCTTGTAA
CGATCGGCTTTCGGATGACTATTACCGGGCCGTCTATCTGACTGAGCGGA
CAGTTCGCGATCTGATCGAGAAGATTACCATAAAACAGCGCATTGATCCG
CAGCGTGTAGTGCGTGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAAT
GGTGGATGATGATGTGCGCGAGCTTCCTGACGGCCAGGACATGATTGTTG
AAATGTCCGAGGTATCGTCATTCAAGAACGCCGCAGTTACGGGGCCAGGA
AATCCTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAATCCTGCCACCG
CATATTACAACGCTCTTTGTTTTCCTTTATCGCTCATAAGTCTTCGTTCC
GATTGAGCCTTGCTTGACCAGAAACAGAAGTGAACTTTCCCTTTCGCAGT
TGGCTTTCAATCTATGGGCGCCTGGTGCGTTGCGTGAGATACGCTTGGTC
GCATACATTGCTCAAGCGGCATGCCTTATTTTGGGGATTTGCTTGCGTCA
ATCGGGGGCGTTCCTTTGGGTACGGTTAATAAAAGTTCTCGGGAAATGAC
AACTTGTCGCCATATACGCGCTTTGTTGCCTTCCCCCTTCTTTATAGTCA
TATCTTGGACGATATCCTAAACGTTTCCTCGTCGGCAGCGTGGTCTGTGT
TGTAGGGGTTACACGACCCCAACAATGTTCTTGGTTTTATGATATTATGT
GGGTTGCATTTCCGAGGATCTGGCTGAGCTACGACAAACAGAAACTAGAT
ATGCTGTCCGTTCCTGTCGTAAATACTTCTCTCCTGCAGTTGTATCTTTC
ATAGTGGAAGGTCTCAGACAATCTCCCTTCTGGGATCGCTGATTGTTTCC
GTTTTCGGATTTGCTGTGTCGGCTACCTACTCTTATGATCCAAGCATTAC
ACCTTTCCGCAAGCGCTCTCAGCATTTGCGCAGATTGCCCTTTGCTTGTT
ATGTGCGCCATTTTGAGTCTTGCGTGTTAACCCGCTTATACTTTGAACCC
GATAGAAACGGAGGGGTTGAAGCTGCCATTCGCGTCACATCAAAAACACT
AATTGGATACGCGAAGAACCCGCGCAAATAAGGAG back to topCoding sequence (CDS) from alignment at ch3:4792004..4795588+ >KJC3_004375-T5 ID=KJC3_004375-T5|Name=KJC3_004375-T5|organism=Aspergillus niger KJC3|type=CDS|length=6390bp|location=Sequence derived from alignment at ch3:4792004..4795588+ (Aspergillus niger KJC3)
ATGAATAACGATACGAAGCTCAGTGATTCTACGCCCCGCGCAACAGAAGA
CATGCGGTTTCCAGCTCCCTATACCGATCCGAACGCTGTCTCTTATGTAA
TCCCGCTACAACCACATAGGAGCTCTACGCCCAATTCAGGTAGACTGGGT
GCCGTGTACCATAGTCAAGCGGGGGAATTGCATTTTCCTGTGACGGGTCT
GAGTATGATTACTCCGCTCTCTCTCCCGCAGCAGGTTTCTGCAGCTCCCG
TCAACCCCGAAACTGCAGCCTCAGGTCTTGATAACTTCGACCAGCAATAT
ATTCCCCCACACTTCCATTGCCCCCAGCCGTTTGCTCAGCAGCCAACCTT
TGCACCCACGGCTTTCGTTCAGAGTGATGCAGGTTACGATGCCATGGACG
AGCCTGTTGAAGAACACTCTCTAAACAATATGGATGTGCAGAGTAGCACG
CCTTCTCACAACCTTGCATCATCAATTCAAGACGATCAAGCGAGCATTGC
GAACCCAGGTGAAACTCTTCGCTATCGCATCACTTTGCGCGCACCTACAG
CAATGATCAATGGCCAAGCCGAGATCCCAGTTACTTACCTTAACAAAGGC
CAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCATGACTAT
GCGATCGATCAAATATCGAACCTATATCCGTGTGTCATTCCAAGAAGAAG
AGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAAGGTCGA
GGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAGTGGAGTA
TGTCGATCCCATACAGGGAGGCATCAAAGAGACAAAGAACCGGCAGGTCC
AGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACTCGTAAC
CCGTCAACTGGGGCCTCAGAATGTTTGATACCTGTCCGGTTTAACTTCCT
ATCAACAGATTTCAGTCTGTCCAAGGGTGTCAAGGGTATTCCGGTCAGAT
TGTGTGCGAAGACAGAAATGCTCTCCCCGGATTATGCGAGCTCAAGCCCG
AGCAGGAGGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCGCGACCA
TGGGGCTGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTTAAGAAGACCA
TCGAAAAGCTTCGACAACAGATTGCTCAAGCTGAGATGGGCCCCGGTAAC
TGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGGGCGCTGA
TCCCCGCCCAGCCAAAATCAGCAAGTATAAACGGGTACGGTCCGTGGGCT
CGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCATGCGAAG
CTTGCCTTAATGCAAGGTATGTTCACATCAACGCGGCCGGTAAGCGTCCT
AGGATTGCGGGGTGAAGAGCAAGACGACCCGGAGTTGTACCCTGTCATGC
TGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGGTCTCGG
CTCAATATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCAGCAGTAG
CATCTCCGTGAGCTCGCCATTCCTTCCTACCAATCTGCAGTCGAATACGT
TCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGAAATTCA
CTACCATGCTCTGAAGTCCTGGGCGACATGGTCACGCTAAAGTATCCCGT
CAAAGTACCGAAGTTCACTTCAACCGTCGGTAACGCCAACATGGGATACA
TAGAGGCAGTAGACATTGACCCAAATTATCATCCACCGGCGGAGCGACCA
GTAATCTCAATCGCTTGTTTCTACGTACGATTTCCTTGTAACGATCGGCT
TTCGGATGACTATTACCGGGCCGTCTATCTGACTGAGCGGACAGTTCGCG
ATCTGATCGAGAAGATTACCATAAAACAGCGCATTGATCCGCAGCGTGTA
GTGCGTGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAATGGTGGATGA
TGATGTGCGCGAGCTTCCTGACGGCCAGGACATGATTGTTGAAATGTCCG
AGGTATCGTCATTCAAGAACGCCGCAGTTACGGGGCCAGGAAATCCTAGT
TCAGCCCTCGAGCTCAAATTAAGCTACTAAATGAATAACGATACGAAGCT
CAGTGATTCTACGCCCCGCGCAACAGAAGACATGCGGTTTCCAGCTCCCT
ATACCGATCCGAACGCTGTCTCTTATGTAATCCCGCTACAACCACATAGG
AGCTCTACGCCCAATTCAGGTAGACTGGGTGCCGTGTACCATAGTCAAGC
GGGGGAATTGCATTTTCCTGTGACGGGTCTGAGTATGATTACTCCGCTCT
CTCTCCCGCAGCAGGTTTCTGCAGCTCCCGTCAACCCCGAAACTGCAGCC
TCAGGTCTTGATAACTTCGACCAGCAATATATTCCCCCACACTTCCATTG
CCCCCAGCCGTTTGCTCAGCAGCCAACCTTTGCACCCACGGCTTTCGTTC
AGAGTGATGCAGGTTACGATGCCATGGACGAGCCTGTTGAAGAACACTCT
CTAAACAATATGGATGTGCAGAGTAGCACGCCTTCTCACAACCTTGCATC
ATCAATTCAAGACGATCAAGCGAGCATTGCGAACCCAGGTGAAACTCTTC
GCTATCGCATCACTTTGCGCGCACCTACAGCAATGATCAATGGCCAAGCC
GAGATCCCAGTTACTTACCTTAACAAAGGCCAGGCGTACTCGGTGTCCGT
GATTGATTCTACGCCGCCCCCCATGACTATGCGATCGATCAAATATCGAA
CCTATATCCGTGTGTCATTCCAAGAAGAAGAGCAGAGGGCAAAGCCAGCT
GTTTGTTGGCGACTATGGAAAGAAGGTCGAGGTTCCGATGAAGCGCATCG
ACGAGGCGGCAAGCTCCAAGCAGTGGAGTATGTCGATCCCATACAGGGAG
GCATCAAAGAGACAAAGAACCGGCAGGTCCAGCTCGAGAGCTCAGCATTC
GATGGATTCTGCGTCACATGGACTCGTAACCCGTCAACTGGGGCCTCAGA
ATGTTTGATACCTGTCCGGTTTAACTTCCTATCAACAGATTTCAGTCTGT
CCAAGGGTGTCAAGGGTATTCCGGTCAGATTGTGTGCGAAGACAGAAATG
CTCTCCCCGGATTATGCGAGCTCAAGCCCGAGCAGGAGGGCAGAGGTGTG
CTACTGCAAGGTCAAGCTTTTCCGCGACCATGGGGCTGAGCGGAAGCTCT
CCTGTGATGTCGCTCATGTTAAGAAGACCATCGAAAAGCTTCGACAACAG
ATTGCTCAAGCTGAGATGGGCCCCGGTAACTGCGGCAAGCGTAAGCGTAG
CAATGGCTTGGTTGCACTCAAGGGCGCTGATCCCCGCCCAGCCAAAATCA
GCAAGTATAAACGGGTACGGTCCGTGGGCTCGCAGGACGGCCCTGGCAAA
ATGCGTTTGGAAGGCGATCTCCATGCGAAGCTTGCCTTAATGCAAGGTAT
GTTCACATCAACGCGGCCGGTAAGCGTCCTAGGATTGCGGGGTGAAGAGC
AAGACGACCCGGAGTTGTACCCTGTCATGCTGCCCGAGTCGCGTGTTTTC
GTCGAACAAGAGAACAGTCGCGGGTCTCGGCTCAATATTGATGGTTCGTC
TTTGCACGCCGTTTCACCTACCAGCAGTAGCATCTCCGTGAGCTCGCCAT
TCCTTCCTACCAATCTGCAGTCGAATACGTTCTATTGCTCAGGGTACCAT
CGATCATTGACCACCTCCCGAGGAAATTCACTACCATGCTCTGAAGTCCT
GGGCGACATGGTCACGCTAAAGTATCCCGTCAAAGTACCGAAGTTCACTT
CAACCGTCGGTAACGCCAACATGGGATACATAGAGGCAGTAGACATTGAC
CCAAATTATCATCCACCGGCGGAGCGACCAGTAATCTCAATCGCTTGTTT
CTACGTACGATTTCCTTGTAACGATCGGCTTTCGGATGACTATTACCGGG
CCGTCTATCTGACTGAGCGGACAGTTCGCGATCTGATCGAGAAGATTACC
ATAAAACAGCGCATTGATCCGCAGCGTGTAGTGCGTGTCCTCCATGTCAA
GCAAAATGGCCTCGAAATAATGGTGGATGATGATGTGCGCGAGCTTCCTG
ACGGCCAGGACATGATTGTTGAAATGTCCGAGGTATCGTCATTCAAGAAC
GCCGCAGTTACGGGGCCAGGAAATCCTAGTTCAGCCCTCGAGCTCAAATT
AAGCTACTAAATGAATAACGATACGAAGCTCAGTGATTCTACGCCCCGCG
CAACAGAAGACATGCGGTTTCCAGCTCCCTATACCGATCCGAACGCTGTC
TCTTATGTAATCCCGCTACAACCACATAGGAGCTCTACGCCCAATTCAGG
TAGACTGGGTGCCGTGTACCATAGTCAAGCGGGGGAATTGCATTTTCCTG
TGACGGGTCTGAGTATGATTACTCCGCTCTCTCTCCCGCAGCAGGTTTCT
GCAGCTCCCGTCAACCCCGAAACTGCAGCCTCAGGTCTTGATAACTTCGA
CCAGCAATATATTCCCCCACACTTCCATTGCCCCCAGCCGTTTGCTCAGC
AGCCAACCTTTGCACCCACGGCTTTCGTTCAGAGTGATGCAGGTTACGAT
GCCATGGACGAGCCTGTTGAAGAACACTCTCTAAACAATATGGATGTGCA
GAGTAGCACGCCTTCTCACAACCTTGCATCATCAATTCAAGACGATCAAG
CGAGCATTGCGAACCCAGGTGAAACTCTTCGCTATCGCATCACTTTGCGC
GCACCTACAGCAATGATCAATGGCCAAGCCGAGATCCCAGTTACTTACCT
TAACAAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCC
CCATGACTATGCGATCGATCAAATATCGAACCTATATCCGTGTGTCATTC
CAAGAAGAAGAGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAA
AGAAGGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAG
CAGTGGAGTATGTCGATCCCATACAGGGAGGCATCAAAGAGACAAAGAAC
CGGCAGGTCCAGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATG
GACTCGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATACCTGTCCGGT
TTAACTTCCTATCAACAGATTTCAGTCTGTCCAAGGGTGTCAAGGGTATT
CCGGTCAGATTGTGTGCGAAGACAGAAATGCTCTCCCCGGATTATGCGAG
CTCAAGCCCGAGCAGGAGGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTT
TCCGCGACCATGGGGCTGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTT
AAGAAGACCATCGAAAAGCTTCGACAACAGATTGCTCAAGCTGAGATGGG
CCCCGGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCA
AGGGCGCTGATCCCCGCCCAGCCAAAATCAGCAAGTATAAACGGGTACGG
TCCGTGGGCTCGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCT
CCATGCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCAACGCGGCCGG
TAAGCGTCCTAGGATTGCGGGGTGAAGAGCAAGACGACCCGGAGTTGTAC
CCTGTCATGCTGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCG
CGGGTCTCGGCTCAATATTGATGGTTCGTCTTTGCACGCCGTTTCACCTA
CCAGCAGTAGCATCTCCGTGAGCTCGCCATTCCTTCCTACCAATCTGCAG
TCGAATACGTTCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCG
AGGAAATTCACTACCATGCTCTGAAGTCCTGGGCGACATGGTCACGCTAA
AGTATCCCGTCAAAGTACCGAAGTTCACTTCAACCGTCGGTAACGCCAAC
ATGGGATACATAGAGGCAGTAGACATTGACCCAAATTATCATCCACCGGC
GGAGCGACCAGTAATCTCAATCGCTTGTTTCTACGTACGATTTCCTTGTA
ACGATCGGCTTTCGGATGACTATTACCGGGCCGTCTATCTGACTGAGCGG
ACAGTTCGCGATCTGATCGAGAAGATTACCATAAAACAGCGCATTGATCC
GCAGCGTGTAGTGCGTGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAA
TGGTGGATGATGATGTGCGCGAGCTTCCTGACGGCCAGGACATGATTGTT
GAAATGTCCGAGGTATCGTCATTCAAGAACGCCGCAGTTACGGGGCCAGG
AAATCCTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004375-T5.utr3p1 | KJC3_004375-T5.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007604 |
| DBxref | PFAM:PF04516 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4792004..4795588 + |
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