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KJC3_004394-T1, KJC3_004394-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004394-T1
Unique NameKJC3_004394-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4988325..4991789+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004394-T1 ID=KJC3_004394-T1|Name=KJC3_004394-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3465bp|location=Sequence derived from alignment at ch3:4988325..4991789+ (Aspergillus niger KJC3)
ATTTTATTTTGCGTTGCAAAGTGTTTGGCTTCATTGTAGTATCACAATCC
TTTCCGATCTGTACGCGGCAAGTGTGCTTAACACCGATCTAGGCCATGCA
TCGTCTAAAGCCACTGAGAGCGAAGGGAGATGATCAACATATCTATAGCG
TGCGTGACGCGCCTGTAGGCCAAATGTCATGTCAGGTCTACGAAGTGCGA
AGACATAAATACTCCCGGCTCATCTCCTCGAGGTCTGATACAACATTTTC
CAGCTCATGGCTCTGAAAACTCTCTTTGATATATTATGCCCAGTTGAAGT
CATTCTCCGAGACACTCCCTCATTGGTTGAAGACTTCTCTACAACGAGAG
CAAGCTGTGGATAAGGTCCGTCCGGATTCATTTGTGCCTTGGGACATAGA
CCTGGAATTACCAGCTCCTACACTTCAACAAGCCAGGAACCCCTACAGGG
AAGCCAGTCCAATCTAGTACCAGGATCTAACACCATACTTGGCGCCTCTG
AAAGTTCGGCCGACTTCCAACATCGACGAGGGCGACAAGGACAAGCCTCT
CTACTCCTGCAATACCACGCCACCTCTGCCACCTCCCAACGTTAATTCAA
GTAAGTGGTATCGCCTTCATGCGCCCTTCATACTCGTCTATGTCATTCTT
GGGTGTTTAATCTAATGACTTGTTCCGTTACCAGGGCTTGCTTAATGCTC
AATAGCGGATATTGTTTATCCAAGGCGCGCCCATTGAATCTTCAATTCCC
CCTATTGCCGGTCACCATTAGCTGGTCTGGATTATCTCAGTCTCTGCGCC
CGTATCTTAACTCTCAGTGTTTCCTTGATATACAATGAACGCCATCAACG
GTGGCTACCCCGGCCCTTCCCAGATGTCTCCCATAGATGTCATCTTTCCC
GGTTTCAGTATGGTCTCGACCACCGCACACCAACTGCTTGCCGGTAACCT
GGACAGCTACACCCGACTCTTTTGTATTTTCGTTGTGTTTGTCCTCGTCA
CCCGCTACGGAGTCAACTATGTGTGGGGGATAGTGAGAACTTATTTCAGT
TCGTATGTCTGCTCCTATGATGGGATGATTCTGACAGTCTAAGCCTCCAC
TATCTATGTCTCATACTACGACGAAGCATACGACATGCTAGTTGACTGGA
TCGCTGACCAACCGTTTGTCCACAATGCTCATTCATTGATCGCTCGAGTG
AGATCCACGCAGCGGACAAACGGTCGCCATTCAACAAAGAAAAAGCCTCT
GGCTTTTTCTCCTTGGGATGGATCATTTCATTTTTGGTATAGGGGGCATT
TGCTCATACTTCACTGCGCTGTCAAAGAGCATCGAGAGGATCTCCGTATC
TCCTCAATTGGTCTTAATGCCAACATCCTGAAAGATCTGATCGAAGAGTG
CCGAGAAAAGTATCTCAAGGAGGCACAGAGGAAGATCTCGGTCTTCGAGC
ACCGGGAAGGGGAGTGGAAGAAAGCCAAACTGAGACCAGTTCGACCTATC
TCCACGGTTATCATGGACGAGGAGGTAAAGGATGACATTTTGAGAGATGT
GGACGAGTTTCTGGACCAAGACATGCAAGACTGGTACGCAGAACGCGGTA
TTCCGTACAAGCGAGGCTACCTTCTTTTCGGCCCCCCCGGGACTGGAAAA
TCCAGCTTCAGTCTATCGCTCGCGGGAAAGCATGAACTGGACATCTATAC
GCTTCAATTATCGAATATTTCGGACAGCACGCTAATGAGGCTTTTTGCCG
AACTTCCACCGCGTTGTATTGTTCTCTTAGAGGACGTGGATACCGCTGGG
GTAGGGCGTCGGGGCAGTGTCGACACAGACCAAGATGGCAATTCACAATC
TGCAGTCACTCTATCCGGCCTACTGAATGTGCTTGATGGTGTCTCGTCTC
AAGAGGGCCGGATACTCATCATGACCACGAATCATATCGACCATCTGGAC
GAAGCCCTGGTTCGGCCTGGCCGATCAGACAAGAAAGTCCATTTCAAACT
CGCCGATCAGAACATGTCCACTCAGCTCTTCCGCACGGTTTTCAAGCAGT
TGCCGAACAAAAAGCAATGCAACGAGAGATATGACGACGAAACGATCGAG
GGGCTTGCTCGTGAGTTTGCCAGCAAAGTACCCGAGCAAGTATTCAGCCC
GGCAGAGGTTTTATCATTTCTTCTGGAGCGGAAGAAGTCACCCTATGACG
CGGTTTCTGGTATAGAGAGCTGGGTGGCGAAAGCAAAGGATTGAGTGGTT
AATGGGAAGATGTAGGCGGCAGGTGACAAGTGAAATATGAGAATCACAGG
GAAGAGTTGGATCAAGTCATGTTGAGGGAATGTCCTTCTGATAGCGCTAA
CCAATTACTTTTCCTGGGGGCTTTTTTTCATCGCGTATCCTGGGGCTGCT
ATATTTTGCAGCCAATTCGTGCCATGTTATCTCTTGGGGTTTCGGGTAAT
GCGAGGCCTATCTCGTCAGCGAATAATTATTGAATAGTGACGACACCTAC
CAGTTGCTCCCGTGATAGAGGCCATTGGCTGTCAGAATTGAAAAACACTA
TTTGGCCGTTGTGTCTGAGCCGTATCATCATGAAGACATCGGCATCACAC
TCCCGACAATATTCGAAGGACTTCCGGAGAAGACTGTTTCTTCGACGAGT
CTGTTGCTGGCGTATTGATCTGAGGCCGTTGGAGCGGCGTCTGCTGAAGA
GATTTCGTTTCGCTGCCATTGTGCAAGGGCCAGGGACCATTTACCCAACT
CTAATCCATGAGGAGATGGCAGGTTTAAATAACCATGGGTTGACACCGGG
GCGATCCATGGTCCAGAATTGAACGCGAGGAAAGACCACGACGAGTCGAG
GGGGTGTTATGGGTGCGATGAGCGTTGCTAAGGGCCGTTAATATTCGTTG
CGACGTGATGAGAAGGTTACCCTTTCCGCTGAAGATGTAGACCGGGCGCT
GAATGGAGGCGGATATCTTTCTCGGTTGGCGGTGCATTTTCGAGGTCGCT
GGCCAGGGCCGATGAAGTCTCGCTGCATGAAACTTCGCTCGACGGATAGG
AGCCATGCTTTCTTGATAATGGGAAGGGGGACTGCGGGAGTCGGACCTGA
TAGTATCCCTCATGAAACTTGGTGGCCTAAAGCGGGGCAGATAGTACAGT
CCATATGTCCAATCGATCAGTATATCGGCTCGCGGGGGGTGCGATTAACC
CATACCGGAGGTGCGATACCCAAGACCTGCGTGATGTCGGCTGACAGGGA
CTGATAGTAACAAGTTGTCTCAAGACTCGTTCTGGCGCTGCCCGGCTCCC
GCCTCTCACTTTGCCGATGGTGGCATCAAATTCTGAACTCGGAACTTGCT
CTTTTCCTGGAGCTCTTGTGGGAAATTCGCAAGAAACCGCCTGCTAGTCT
GGCTTTGATCTTTGGATGCAGGGAGGTTGCGCTGCTGAAGGTAACTCTTT
CTTCCGCCAAACCAT
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Coding sequence (CDS) from alignment at ch3:4988325..4991789+

>KJC3_004394-T1 ID=KJC3_004394-T1|Name=KJC3_004394-T1|organism=Aspergillus niger KJC3|type=CDS|length=2730bp|location=Sequence derived from alignment at ch3:4988325..4991789+ (Aspergillus niger KJC3)
ATGAACGCCATCAACGGTGGCTACCCCGGCCCTTCCCAGATGTCTCCCAT
AGATGTCATCTTTCCCGGTTTCAGTATGGTCTCGACCACCGCACACCAAC
TGCTTGCCGGTAACCTGGACAGCTACACCCGACTCTTTTGTATTTTCGTT
GTGTTTGTCCTCGTCACCCGCTACGGAGTCAACTATGTGTGGGGGATAGT
GAGAACTTATTTCACCTCCACTATCTATGTCTCATACTACGACGAAGCAT
ACGACATGCTAGTTGACTGGATCGCTGACCAACCGTTTGTCCACAATGCT
CATTCATTGATCGCTCGAGTGAGATCCACGCAGCGGACAAACGGTCGCCA
TTCAACAAAGAAAAAGCCTCTGGCTTTTTCTCCTTGGGATGGATCATTTC
ATTTTTGGTATAGGGGGCATTTGCTCATACTTCACTGCGCTGTCAAAGAG
CATCGAGAGGATCTCCGTATCTCCTCAATTGGTCTTAATGCCAACATCCT
GAAAGATCTGATCGAAGAGTGCCGAGAAAAGTATCTCAAGGAGGCACAGA
GGAAGATCTCGGTCTTCGAGCACCGGGAAGGGGAGTGGAAGAAAGCCAAA
CTGAGACCAGTTCGACCTATCTCCACGGTTATCATGGACGAGGAGGTAAA
GGATGACATTTTGAGAGATGTGGACGAGTTTCTGGACCAAGACATGCAAG
ACTGGTACGCAGAACGCGGTATTCCGTACAAGCGAGGCTACCTTCTTTTC
GGCCCCCCCGGGACTGGAAAATCCAGCTTCAGTCTATCGCTCGCGGGAAA
GCATGAACTGGACATCTATACGCTTCAATTATCGAATATTTCGGACAGCA
CGCTAATGAGGCTTTTTGCCGAACTTCCACCGCGTTGTATTGTTCTCTTA
GAGGACGTGGATACCGCTGGGGTAGGGCGTCGGGGCAGTGTCGACACAGA
CCAAGATGGCAATTCACAATCTGCAGTCACTCTATCCGGCCTACTGAATG
TGCTTGATGGTGTCTCGTCTCAAGAGGGCCGGATACTCATCATGACCACG
AATCATATCGACCATCTGGACGAAGCCCTGGTTCGGCCTGGCCGATCAGA
CAAGAAAGTCCATTTCAAACTCGCCGATCAGAACATGTCCACTCAGCTCT
TCCGCACGGTTTTCAAGCAGTTGCCGAACAAAAAGCAATGCAACGAGAGA
TATGACGACGAAACGATCGAGGGGCTTGCTCGTGAGTTTGCCAGCAAAGT
ACCCGAGCAAGTATTCAGCCCGGCAGAGGTTTTATCATTTCTTCTGGAGC
GGAAGAAGTCACCCTATGACGCGGTTTCTGGTATAGAGAGCTGGGTGGCG
AAAGCAAAGGATTGAATGAACGCCATCAACGGTGGCTACCCCGGCCCTTC
CCAGATGTCTCCCATAGATGTCATCTTTCCCGGTTTCAGTATGGTCTCGA
CCACCGCACACCAACTGCTTGCCGGTAACCTGGACAGCTACACCCGACTC
TTTTGTATTTTCGTTGTGTTTGTCCTCGTCACCCGCTACGGAGTCAACTA
TGTGTGGGGGATAGTGAGAACTTATTTCACCTCCACTATCTATGTCTCAT
ACTACGACGAAGCATACGACATGCTAGTTGACTGGATCGCTGACCAACCG
TTTGTCCACAATGCTCATTCATTGATCGCTCGAGTGAGATCCACGCAGCG
GACAAACGGTCGCCATTCAACAAAGAAAAAGCCTCTGGCTTTTTCTCCTT
GGGATGGATCATTTCATTTTTGGTATAGGGGGCATTTGCTCATACTTCAC
TGCGCTGTCAAAGAGCATCGAGAGGATCTCCGTATCTCCTCAATTGGTCT
TAATGCCAACATCCTGAAAGATCTGATCGAAGAGTGCCGAGAAAAGTATC
TCAAGGAGGCACAGAGGAAGATCTCGGTCTTCGAGCACCGGGAAGGGGAG
TGGAAGAAAGCCAAACTGAGACCAGTTCGACCTATCTCCACGGTTATCAT
GGACGAGGAGGTAAAGGATGACATTTTGAGAGATGTGGACGAGTTTCTGG
ACCAAGACATGCAAGACTGGTACGCAGAACGCGGTATTCCGTACAAGCGA
GGCTACCTTCTTTTCGGCCCCCCCGGGACTGGAAAATCCAGCTTCAGTCT
ATCGCTCGCGGGAAAGCATGAACTGGACATCTATACGCTTCAATTATCGA
ATATTTCGGACAGCACGCTAATGAGGCTTTTTGCCGAACTTCCACCGCGT
TGTATTGTTCTCTTAGAGGACGTGGATACCGCTGGGGTAGGGCGTCGGGG
CAGTGTCGACACAGACCAAGATGGCAATTCACAATCTGCAGTCACTCTAT
CCGGCCTACTGAATGTGCTTGATGGTGTCTCGTCTCAAGAGGGCCGGATA
CTCATCATGACCACGAATCATATCGACCATCTGGACGAAGCCCTGGTTCG
GCCTGGCCGATCAGACAAGAAAGTCCATTTCAAACTCGCCGATCAGAACA
TGTCCACTCAGCTCTTCCGCACGGTTTTCAAGCAGTTGCCGAACAAAAAG
CAATGCAACGAGAGATATGACGACGAAACGATCGAGGGGCTTGCTCGTGA
GTTTGCCAGCAAAGTACCCGAGCAAGTATTCAGCCCGGCAGAGGTTTTAT
CATTTCTTCTGGAGCGGAAGAAGTCACCCTATGACGCGGTTTCTGGTATA
GAGAGCTGGGTGGCGAAAGCAAAGGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0034551mitochondrial respiratory chain complex III assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004394KJC3_004394Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004394-T1KJC3_004394-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004394-T1.utr5p1KJC3_004394-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_004394-T1.utr5p2KJC3_004394-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004394-T1.exon1KJC3_004394-T1.exon1Aspergillus niger KJC3exon
KJC3_004394-T1.exon2KJC3_004394-T1.exon2Aspergillus niger KJC3exon
KJC3_004394-T1.exon3KJC3_004394-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004394-T1.cdsKJC3_004394-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004394-T1.utr3p1KJC3_004394-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR014851
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08740
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4988325..4991789 +
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