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KJC3_004420-T2, KJC3_004420-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004420-T2
Unique NameKJC3_004420-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5229193..5231047-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004420-T2 ID=KJC3_004420-T2|Name=KJC3_004420-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1855bp|location=Sequence derived from alignment at ch3:5229193..5231047- (Aspergillus niger KJC3)
GTCGGGGACATTGTCGGGGGTCATTAGTCAGCAGTCTTGGCTGCGGAATA
TTTGCTTTCCGCAACGCGTCAGCGAGATCTTGCCGAGACACGATCGCAGG
GACGTGATTGTCTACATCCAGGCGGCGACATTGGTTTTTGCGGAAGATTT
CACAGAGCCGATCCAGGTTTTGGGAATCAAGATCCCGGGGCAACGGAGGA
TCGAAATGGATTTGATAGATACTGACTTTGGCTGTACCTAGGTATTTCAA
GCGCCGCTCCGTCGCCAGCCGGACCTCTTCCTCTGTAAAGAGAGCCCGCT
GCATTGCAAGGGCCGGAAATGGAAACAGGTATCAAGAGCGATGGCAAGGA
AGTCAGTATTTATGACTGAATGTATATATCTCCCATGCATCGTCCACTGC
GGTAGTACAGTGGCACTGCGGTGCTACCGCAGTTGCTTCAAACATGAAAC
GCAAGTTCCCCGCAGCGGCCTGAAACAGCAACCAACCCTAACTTAAAATC
ACGTCTCTCGCTCGCGTTCATTGCCACTTTGACCATACGTACTCAATCTC
TTCCAAGACCGTCATGGCCCCGGCTGATGGCAAGCGGGCCACCCAGTTCC
TGGCGGATGCGGTTCCTCTGCTTGAACAACCTCCCCCAGATCCTGCAGCT
GCAGTGCTCCCATTACCTGTCCCTAGACCTAAGCCTAATGGGACTATATC
ATCCAGCGCGCGTCTGACCAAAAGGCCTGCTGCTCCCTCGCCTGCAGGCC
CAAGCCACAAGATCATTCGAGGCCCACCACGAAGTTTGGCTCTTCCGGAG
GCCACGGGGTTGGGAAACAGTGTGGATTCTGATCTAGTTATACGGGAGGA
GCCTCCCTGGGACACTTTCAAAAAGTATTATGAATGTGACTTGGCTGGCA
CTGTTGCTGTATGTGTGCGATGTTCTGGTCGCCGTGCAGTCTGGGCGATT
CGTCAGTATCCCCACAAGGATACTGACAAAATCCTGACTATCCTTCGGTC
CACGCGCCATAAGAACGTGGACTCTGTTTGGGAATGCTTCCGCACCTCTG
ATGCTCTGTATACTCTCGGCAAATTCTATCCACTCACGCTAGATCATGTC
GTTGCCTGCAAGGCCTTTCCAGACCAGCCGCAGCTGGCTGCGATTATATC
TCAGGTCATTCAAGTTCACGCTGATATATCTGATTGCTAACTGTTTCCAG
TTTATTGATGGTTTGTCATATCTTGTCTCCCAGAATCTCCAGCATACGTC
CCTGGATTGTTCCAGCATACTCATGAGTCTCGAAGGGGAGATCCGAATCG
GTAATTCCACTACTTTAGCCCCGTGGGAAAGCAGCTCTGACCGGGATTTC
TAGCACGGATAGAGTTATGGGCTGTCCGGTCGTCGGAGGCGGACCAAGCA
GACGATTTGGCCTCCGTTGCGCGAGTAATGATGCAGCTCATGCAGAAATA
TGTTAAGGATGACGGAGCAGTTGGGATTGACAACCTCGATCGTTGGCGCA
ACTGCCCAGCTGCTATTGAATTCCTCTCAGCGACGACATCAGCCGGCTCA
TTGGGAGTTCTCAAAAAGGTTAGTTGTATCCTCGTTACATTCGAAAGCTG
CTCATTTATTTTTAGCAACGTCTCCTGACGGAAGTCCGTTGGTCTCGTAG
TGACCTCATTGGGATTGCATGGTTTGCTCTAATATCTGCACGTACATTCT
ATTCGTACGCACCTTAGTCAGATACAGAGATATAGACTACAATTGTGACT
AGATGAGCTGCTGTACACTAGAGACTGTTGATGCTTTTTATGTAGAACCA
TACAGATGCTCTTTCCGGGTTAGTTACAGCACACTAATCGCCCCTTTCTT
TCGGT
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Coding sequence (CDS) from alignment at ch3:5229193..5231047-

>KJC3_004420-T2 ID=KJC3_004420-T2|Name=KJC3_004420-T2|organism=Aspergillus niger KJC3|type=CDS|length=2898bp|location=Sequence derived from alignment at ch3:5229193..5231047- (Aspergillus niger KJC3)
CACGGATAGAGTTATGGGCTGTCCGGTCGTCGGAGGCGGACCAAGCAGAC
GATTTGGCCTCCGTTGCGCGAGTAATGATGCAGCTCATGCAGAAATATGT
TAAGGATGACGGAGCAGTTGGGATTGACAACCTCGATCGTTGGCGCAACT
GCCCAGCTGCTATTGAATTCCTCTCAGCGACGACATCAGCCGGCTCATTG
GGAGTTCTCAAAAAGGTTAGTTGTATCCTCGTTACATTCGAAAGCTGCTC
ATTTATTTTTAGCAACGTCTCCTGATTTATTGATGGTTTGTCATATCTTG
TCTCCCAGAATCTCCAGCATACGTCCCTGGATTGTTCCAGCATACTCATG
AGTCTCGAAGGGGAGATCCGAATCGATGGCCCCGGCTGATGGCAAGCGGG
CCACCCAGTTCCTGGCGGATGCGGTTCCTCTGCTTGAACAACCTCCCCCA
GATCCTGCAGCTGCAGTGCTCCCATTACCTGTCCCTAGACCTAAGCCTAA
TGGGACTATATCATCCAGCGCGCGTCTGACCAAAAGGCCTGCTGCTCCCT
CGCCTGCAGGCCCAAGCCACAAGATCATTCGAGGCCCACCACGAAGTTTG
GCTCTTCCGGAGGCCACGGGGTTGGGAAACAGTGTGGATTCTGATCTAGT
TATACGGGAGGAGCCTCCCTGGGACACTTTCAAAAAGTATTATGAATGTG
ACTTGGCTGGCACTGTTGCTGTATGTGTGCGATGTTCTGGTCGCCGTGCA
GTCTGGGCGATTCGTCAGTATCCCCACAAGGATACTGACAAAATCCTGAC
TATCCTTCGGTCCACGCGCCATAAGAACGTGGACTCTGTTTGGGAATGCT
TCCGCACCTCTGATGCTCTGTATACTCTCGGCAAATTCTATCCACTCACG
CTAGATCATGTCGTTGCCTGCAAGGCCTTTCCAGACCAGCCGCAGCTGGC
TGCGATTATATCTCAGCACGGATAGAGTTATGGGCTGTCCGGTCGTCGGA
GGCGGACCAAGCAGACGATTTGGCCTCCGTTGCGCGAGTAATGATGCAGC
TCATGCAGAAATATGTTAAGGATGACGGAGCAGTTGGGATTGACAACCTC
GATCGTTGGCGCAACTGCCCAGCTGCTATTGAATTCCTCTCAGCGACGAC
ATCAGCCGGCTCATTGGGAGTTCTCAAAAAGGTTAGTTGTATCCTCGTTA
CATTCGAAAGCTGCTCATTTATTTTTAGCAACGTCTCCTGATTTATTGAT
GGTTTGTCATATCTTGTCTCCCAGAATCTCCAGCATACGTCCCTGGATTG
TTCCAGCATACTCATGAGTCTCGAAGGGGAGATCCGAATCGATGGCCCCG
GCTGATGGCAAGCGGGCCACCCAGTTCCTGGCGGATGCGGTTCCTCTGCT
TGAACAACCTCCCCCAGATCCTGCAGCTGCAGTGCTCCCATTACCTGTCC
CTAGACCTAAGCCTAATGGGACTATATCATCCAGCGCGCGTCTGACCAAA
AGGCCTGCTGCTCCCTCGCCTGCAGGCCCAAGCCACAAGATCATTCGAGG
CCCACCACGAAGTTTGGCTCTTCCGGAGGCCACGGGGTTGGGAAACAGTG
TGGATTCTGATCTAGTTATACGGGAGGAGCCTCCCTGGGACACTTTCAAA
AAGTATTATGAATGTGACTTGGCTGGCACTGTTGCTGTATGTGTGCGATG
TTCTGGTCGCCGTGCAGTCTGGGCGATTCGTCAGTATCCCCACAAGGATA
CTGACAAAATCCTGACTATCCTTCGGTCCACGCGCCATAAGAACGTGGAC
TCTGTTTGGGAATGCTTCCGCACCTCTGATGCTCTGTATACTCTCGGCAA
ATTCTATCCACTCACGCTAGATCATGTCGTTGCCTGCAAGGCCTTTCCAG
ACCAGCCGCAGCTGGCTGCGATTATATCTCAGCACGGATAGAGTTATGGG
CTGTCCGGTCGTCGGAGGCGGACCAAGCAGACGATTTGGCCTCCGTTGCG
CGAGTAATGATGCAGCTCATGCAGAAATATGTTAAGGATGACGGAGCAGT
TGGGATTGACAACCTCGATCGTTGGCGCAACTGCCCAGCTGCTATTGAAT
TCCTCTCAGCGACGACATCAGCCGGCTCATTGGGAGTTCTCAAAAAGGTT
AGTTGTATCCTCGTTACATTCGAAAGCTGCTCATTTATTTTTAGCAACGT
CTCCTGATTTATTGATGGTTTGTCATATCTTGTCTCCCAGAATCTCCAGC
ATACGTCCCTGGATTGTTCCAGCATACTCATGAGTCTCGAAGGGGAGATC
CGAATCGATGGCCCCGGCTGATGGCAAGCGGGCCACCCAGTTCCTGGCGG
ATGCGGTTCCTCTGCTTGAACAACCTCCCCCAGATCCTGCAGCTGCAGTG
CTCCCATTACCTGTCCCTAGACCTAAGCCTAATGGGACTATATCATCCAG
CGCGCGTCTGACCAAAAGGCCTGCTGCTCCCTCGCCTGCAGGCCCAAGCC
ACAAGATCATTCGAGGCCCACCACGAAGTTTGGCTCTTCCGGAGGCCACG
GGGTTGGGAAACAGTGTGGATTCTGATCTAGTTATACGGGAGGAGCCTCC
CTGGGACACTTTCAAAAAGTATTATGAATGTGACTTGGCTGGCACTGTTG
CTGTATGTGTGCGATGTTCTGGTCGCCGTGCAGTCTGGGCGATTCGTCAG
TATCCCCACAAGGATACTGACAAAATCCTGACTATCCTTCGGTCCACGCG
CCATAAGAACGTGGACTCTGTTTGGGAATGCTTCCGCACCTCTGATGCTC
TGTATACTCTCGGCAAATTCTATCCACTCACGCTAGATCATGTCGTTGCC
TGCAAGGCCTTTCCAGACCAGCCGCAGCTGGCTGCGATTATATCTCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004420KJC3_004420Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004420-T2KJC3_004420-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004420-T2.cdsKJC3_004420-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004420-T2.utr3p1KJC3_004420-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004420-T2.exon3KJC3_004420-T2.exon3Aspergillus niger KJC3exon
KJC3_004420-T2.exon2KJC3_004420-T2.exon2Aspergillus niger KJC3exon
KJC3_004420-T2.exon1KJC3_004420-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004420-T2.utr5p1KJC3_004420-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011009
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5229193..5231047 -
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