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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5269206..5271883+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004432-T1 ID=KJC3_004432-T1|Name=KJC3_004432-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2678bp|location=Sequence derived from alignment at ch3:5269206..5271883+ (Aspergillus niger KJC3)
TGAACCAATACTACCTCATCAAAATGTAGACAACAATACGCCTAGTGGCC
TCGAACGTGAGCCTTTCTCCTCTGTGAGGAATGGCTAATGTGGCAGACAA
CACTATTTTCTTATTGGTATTCACTCCCAGAGAATCCTTCAGCTTCAGCT
TCTTCGGGTCCAGGTGGGCTGGACGCCACCGCAATGGGATATCACATGCA
GCAATGGCTCCTGGAACGCAAGGCACAACCCAGGATCTGATATGTCTCCG
GAGAACCGCACCATCCCAGTGCGCTCCGTCCGATATTATGCTCCTATTTG
CAGGTCAACCGCAGAGACCGGGTGGATATATCGGAATCGTGCATACACCG
ACGAAGAGATGATGAATCCCGCAAGTTGAGCTACAGGTCTGGTTGCTGCT
GTAGTCCGGCCCCCTGAATTATATAAAGCTCGACGAGACGCACAATCACC
TTTCATTTCCATCTTCATATTTCAAGTCATACAATACGCGCCCTGTCATT
CATCATGGAGTGCTCAGCAGCCTGGATCAACTCAACAACCGTCGACGAAA
TCTCTGTCCGCAAGTCCGGCGCGTTCACAACCTTGCCAGTGCGGATCAGC
AAGTACAATGAAATTGCCATCACTACCGCGCAAAAGCTTGCTTGTATCTG
GGATACCATGCGCTGTGGCAGTGTATCTTCTCGCCCCATCAATGTTGGAA
GGAATCTGCTTCCCTTGGTTGTCCCTGAGGCCTTGCCGGAGAGAACGGCA
ACGGCCGTGAAACTGATCGAATTGGGCCATTTGTGTGATGGTATGTACGA
TTCTTGCTTCTGTTGCACACAGCTAATAGTGTAGTCTTTTCCGATCAGCT
AGACTCACAGAGCAGAGCGGAAGTCTACAGTATGCTGACCCGATGTCTGG
ATCGGTGCTCTGTAGCTTCGTCTTGCTCTTGTCCTAGTACATGCAACAAA
GAGTTTGGCGACAGACAGGCTCAGCTGCGGACACTGATTTATGAAGTGGC
CACTGAAGCTATTCAGTTCGATCGTGAACAGGGTATGCTCATCCTTGAGC
TCCTTGGGAAAGCTGTCGCACCGGAGCCAATGTCCTTTGGATGCAGGAAG
AGCTCTGCGTTTAGGTACGTCGTCAACATGCATCTCTCAATTGTTGATTT
CTAATATGACCTAGGACTTTCTGGCCTATCCTCGAGTTTGCTATTGGTAT
GAAGCTAAGCGAAATGGACCGGATACTCCTCCGAGACATCAAGAACGTGG
TTGATGAATGTCACATGCTGAACGATGAGTATTGGGGTGCAAATGCCACT
AGCTCAGGAGTATACCAAACAGACTTTGGCAGAATGCCAAGTCTTTCTTT
CGAAGGAGGAAAGGAAAGTCTGAAAAGCCGGATCATCGACCTCGAATATC
GCTACCGGGCTCTTCAGGCAGAAGTTTGCGGGAAATACCCTGTTGAGTCC
ATGCGGCTGCGCCGCTGGATCGAAGCCGCTGGAGTTGCAATGGCAGGCTA
CAATTACTGGCGTGCTTTATCTGCAAATGGACCTTGCAACAACCTGTCTA
CAAGCGCGTGCTCCTGCTCTCCATCCGAGTGGACACGGGTTACCACTCCG
GCCTCCACCATCTCCTACTCATCCAGTCACACATATTCCGGAACCTACGA
TCGAGGCGAATCCACAACGCTTACCGCCGTCACCAACTACATCAATACCA
TGCCACCGTCTTCCTCGATCCAGACCCTCAACATGACCCCCTCCGCATTG
AATCAATGGACACGCGCTCCAGCTCCAGCCGTCCAGTGCATTTCGTCTCT
CATAACATCTCTATATAACGCGATCACAACCCTGACTGATATCACCGCGG
ACAACACCCAGCGTTACAACCAGCCCACTGCACACGCCGTCTTCGGTACC
ATGCAGGCTAGCAACAGCGCCTACTACACCTTTATCCAGTCGGTGTCGGA
GGCACGCGCCCTGGCAAACCCTGCCCTTGCAACCGACATCCTCCTTGGTG
GCTTCAACCGTCTGTATGCCGGTCACAGCCGTGAGCTGACCTGGAAGTAC
AACGCGTGCATCCCATCGGAGGCTGAATATCTTTCCGTTGTCGATGACAC
CACGGGATCACTATACACACTTCTTGTCAAACTCCTTCAAGCTGAAAGCT
GCTTGCCATTCCACTGCAAGCCTGATCTTACTCCCCTCGCTACGCTGCTA
GCTCGATTTGTCCATGTCAAAGAAGACTACCTCTCGTTCCATAACCGGGA
GAGCAAGATGAGTGGTTTCAGTGATGCACGCGTCCTCTCGTACCCGGTTA
TTCGACTGGCTAATATCAAACCGGACAGTCGGGCGCAGATCTCTCGATAC
CTTTTTGAACGCAAGGACGCAAGCAAGAGTAGCTGCTCCTGTGCAGAGGA
GAAGAAAGATCCCTGCGGCAACTCCGTGAACTACAGCTGCCTGGTGCTTC
TGCTACGCGAGTATGGGGCACTGAGTGCGACACGCGAACTTCTCCGTGAT
ATAGAAGACAAGATTGAGAGGGAGGTAATGCAGATAGAGAAGTTGACGGG
AGAAGTCAACCCTTTGATACGGAAGCTTATTGCAGGACTACGCGAGGGAT
TGCTGCCATAACCCACCACCGCCTATGTTCTCACCCGCCTTCAGCCTACG
AAGGCACCTACGGAGTATATAAGAAAGC back to topCoding sequence (CDS) from alignment at ch3:5269206..5271883+ >KJC3_004432-T1 ID=KJC3_004432-T1|Name=KJC3_004432-T1|organism=Aspergillus niger KJC3|type=CDS|length=6039bp|location=Sequence derived from alignment at ch3:5269206..5271883+ (Aspergillus niger KJC3)
ATGGAGTGCTCAGCAGCCTGGATCAACTCAACAACCGTCGACGAAATCTC
TGTCCGCAAGTCCGGCGCGTTCACAACCTTGCCAGTGCGGATCAGCAAGT
ACAATGAAATTGCCATCACTACCGCGCAAAAGCTTGCTTGTATCTGGGAT
ACCATGCGCTGTGGCAGTGTATCTTCTCGCCCCATCAATGTTGGAAGGAA
TCTGCTTCCCTTGGTTGTCCCTGAGGCCTTGCCGGAGAGAACGGCAACGG
CCGTGAAACTGATCGAATTGGGCCATTTGTGTGATGTCTTTTCCGATCAG
CTAGACTCACAGAGCAGAGCGGAAGTCTACAGTATGCTGACCCGATGTCT
GGATCGGTGCTCTGTAGCTTCGTCTTGCTCTTGTCCTAGTACATGCAACA
AAGAGTTTGGCGACAGACAGGCTCAGCTGCGGACACTGATTTATGAAGTG
GCCACTGAAGCTATTCAGTTCGATCGTGAACAGGGTATGCTCATCCTTGA
GCTCCTTGGGAAAGCTGTCGCACCGGAGCCAATGTCCTTTGGATGCAGGA
AGAGCTCTGCGTTTAGGACTTTCTGGCCTATCCTCGAGTTTGCTATTGGT
ATGAAGCTAAGCGAAATGGACCGGATACTCCTCCGAGACATCAAGAACGT
GGTTGATGAATGTCACATGCTGAACGATGAGTATTGGGGTGCAAATGCCA
CTAGCTCAGGAGTATACCAAACAGACTTTGGCAGAATGCCAAGTCTTTCT
TTCGAAGGAGGAAAGGAAAGTCTGAAAAGCCGGATCATCGACCTCGAATA
TCGCTACCGGGCTCTTCAGGCAGAAGTTTGCGGGAAATACCCTGTTGAGT
CCATGCGGCTGCGCCGCTGGATCGAAGCCGCTGGAGTTGCAATGGCAGGC
TACAATTACTGGCGTGCTTTATCTGCAAATGGACCTTGCAACAACCTGTC
TACAAGCGCGTGCTCCTGCTCTCCATCCGAGTGGACACGGGTTACCACTC
CGGCCTCCACCATCTCCTACTCATCCAGTCACACATATTCCGGAACCTAC
GATCGAGGCGAATCCACAACGCTTACCGCCGTCACCAACTACATCAATAC
CATGCCACCGTCTTCCTCGATCCAGACCCTCAACATGACCCCCTCCGCAT
TGAATCAATGGACACGCGCTCCAGCTCCAGCCGTCCAGTGCATTTCGTCT
CTCATAACATCTCTATATAACGCGATCACAACCCTGACTGATATCACCGC
GGACAACACCCAGCGTTACAACCAGCCCACTGCACACGCCGTCTTCGGTA
CCATGCAGGCTAGCAACAGCGCCTACTACACCTTTATCCAGTCGGTGTCG
GAGGCACGCGCCCTGGCAAACCCTGCCCTTGCAACCGACATCCTCCTTGG
TGGCTTCAACCGTCTGTATGCCGGTCACAGCCGTGAGCTGACCTGGAAGT
ACAACGCGTGCATCCCATCGGAGGCTGAATATCTTTCCGTTGTCGATGAC
ACCACGGGATCACTATACACACTTCTTGTCAAACTCCTTCAAGCTGAAAG
CTGCTTGCCATTCCACTGCAAGCCTGATCTTACTCCCCTCGCTACGCTGC
TAGCTCGATTTGTCCATGTCAAAGAAGACTACCTCTCGTTCCATAACCGG
GAGAGCAAGATGAGTGGTTTCAGTGATGCACGCGTCCTCTCGTACCCGGT
TATTCGACTGGCTAATATCAAACCGGACAGTCGGGCGCAGATCTCTCGAT
ACCTTTTTGAACGCAAGGACGCAAGCAAGAGTAGCTGCTCCTGTGCAGAG
GAGAAGAAAGATCCCTGCGGCAACTCCGTGAACTACAGCTGCCTGGTGCT
TCTGCTACGCGAGTATGGGGCACTGAGTGCGACACGCGAACTTCTCCGTG
ATATAGAAGACAAGATTGAGAGGGAGGTAATGCAGATAGAGAAGTTGACG
GGAGAAGTCAACCCTTTGATACGGAAGCTTATTGCAGGACTACGCGAGGG
ATTGCTGCCATAAATGGAGTGCTCAGCAGCCTGGATCAACTCAACAACCG
TCGACGAAATCTCTGTCCGCAAGTCCGGCGCGTTCACAACCTTGCCAGTG
CGGATCAGCAAGTACAATGAAATTGCCATCACTACCGCGCAAAAGCTTGC
TTGTATCTGGGATACCATGCGCTGTGGCAGTGTATCTTCTCGCCCCATCA
ATGTTGGAAGGAATCTGCTTCCCTTGGTTGTCCCTGAGGCCTTGCCGGAG
AGAACGGCAACGGCCGTGAAACTGATCGAATTGGGCCATTTGTGTGATGT
CTTTTCCGATCAGCTAGACTCACAGAGCAGAGCGGAAGTCTACAGTATGC
TGACCCGATGTCTGGATCGGTGCTCTGTAGCTTCGTCTTGCTCTTGTCCT
AGTACATGCAACAAAGAGTTTGGCGACAGACAGGCTCAGCTGCGGACACT
GATTTATGAAGTGGCCACTGAAGCTATTCAGTTCGATCGTGAACAGGGTA
TGCTCATCCTTGAGCTCCTTGGGAAAGCTGTCGCACCGGAGCCAATGTCC
TTTGGATGCAGGAAGAGCTCTGCGTTTAGGACTTTCTGGCCTATCCTCGA
GTTTGCTATTGGTATGAAGCTAAGCGAAATGGACCGGATACTCCTCCGAG
ACATCAAGAACGTGGTTGATGAATGTCACATGCTGAACGATGAGTATTGG
GGTGCAAATGCCACTAGCTCAGGAGTATACCAAACAGACTTTGGCAGAAT
GCCAAGTCTTTCTTTCGAAGGAGGAAAGGAAAGTCTGAAAAGCCGGATCA
TCGACCTCGAATATCGCTACCGGGCTCTTCAGGCAGAAGTTTGCGGGAAA
TACCCTGTTGAGTCCATGCGGCTGCGCCGCTGGATCGAAGCCGCTGGAGT
TGCAATGGCAGGCTACAATTACTGGCGTGCTTTATCTGCAAATGGACCTT
GCAACAACCTGTCTACAAGCGCGTGCTCCTGCTCTCCATCCGAGTGGACA
CGGGTTACCACTCCGGCCTCCACCATCTCCTACTCATCCAGTCACACATA
TTCCGGAACCTACGATCGAGGCGAATCCACAACGCTTACCGCCGTCACCA
ACTACATCAATACCATGCCACCGTCTTCCTCGATCCAGACCCTCAACATG
ACCCCCTCCGCATTGAATCAATGGACACGCGCTCCAGCTCCAGCCGTCCA
GTGCATTTCGTCTCTCATAACATCTCTATATAACGCGATCACAACCCTGA
CTGATATCACCGCGGACAACACCCAGCGTTACAACCAGCCCACTGCACAC
GCCGTCTTCGGTACCATGCAGGCTAGCAACAGCGCCTACTACACCTTTAT
CCAGTCGGTGTCGGAGGCACGCGCCCTGGCAAACCCTGCCCTTGCAACCG
ACATCCTCCTTGGTGGCTTCAACCGTCTGTATGCCGGTCACAGCCGTGAG
CTGACCTGGAAGTACAACGCGTGCATCCCATCGGAGGCTGAATATCTTTC
CGTTGTCGATGACACCACGGGATCACTATACACACTTCTTGTCAAACTCC
TTCAAGCTGAAAGCTGCTTGCCATTCCACTGCAAGCCTGATCTTACTCCC
CTCGCTACGCTGCTAGCTCGATTTGTCCATGTCAAAGAAGACTACCTCTC
GTTCCATAACCGGGAGAGCAAGATGAGTGGTTTCAGTGATGCACGCGTCC
TCTCGTACCCGGTTATTCGACTGGCTAATATCAAACCGGACAGTCGGGCG
CAGATCTCTCGATACCTTTTTGAACGCAAGGACGCAAGCAAGAGTAGCTG
CTCCTGTGCAGAGGAGAAGAAAGATCCCTGCGGCAACTCCGTGAACTACA
GCTGCCTGGTGCTTCTGCTACGCGAGTATGGGGCACTGAGTGCGACACGC
GAACTTCTCCGTGATATAGAAGACAAGATTGAGAGGGAGGTAATGCAGAT
AGAGAAGTTGACGGGAGAAGTCAACCCTTTGATACGGAAGCTTATTGCAG
GACTACGCGAGGGATTGCTGCCATAAATGGAGTGCTCAGCAGCCTGGATC
AACTCAACAACCGTCGACGAAATCTCTGTCCGCAAGTCCGGCGCGTTCAC
AACCTTGCCAGTGCGGATCAGCAAGTACAATGAAATTGCCATCACTACCG
CGCAAAAGCTTGCTTGTATCTGGGATACCATGCGCTGTGGCAGTGTATCT
TCTCGCCCCATCAATGTTGGAAGGAATCTGCTTCCCTTGGTTGTCCCTGA
GGCCTTGCCGGAGAGAACGGCAACGGCCGTGAAACTGATCGAATTGGGCC
ATTTGTGTGATGTCTTTTCCGATCAGCTAGACTCACAGAGCAGAGCGGAA
GTCTACAGTATGCTGACCCGATGTCTGGATCGGTGCTCTGTAGCTTCGTC
TTGCTCTTGTCCTAGTACATGCAACAAAGAGTTTGGCGACAGACAGGCTC
AGCTGCGGACACTGATTTATGAAGTGGCCACTGAAGCTATTCAGTTCGAT
CGTGAACAGGGTATGCTCATCCTTGAGCTCCTTGGGAAAGCTGTCGCACC
GGAGCCAATGTCCTTTGGATGCAGGAAGAGCTCTGCGTTTAGGACTTTCT
GGCCTATCCTCGAGTTTGCTATTGGTATGAAGCTAAGCGAAATGGACCGG
ATACTCCTCCGAGACATCAAGAACGTGGTTGATGAATGTCACATGCTGAA
CGATGAGTATTGGGGTGCAAATGCCACTAGCTCAGGAGTATACCAAACAG
ACTTTGGCAGAATGCCAAGTCTTTCTTTCGAAGGAGGAAAGGAAAGTCTG
AAAAGCCGGATCATCGACCTCGAATATCGCTACCGGGCTCTTCAGGCAGA
AGTTTGCGGGAAATACCCTGTTGAGTCCATGCGGCTGCGCCGCTGGATCG
AAGCCGCTGGAGTTGCAATGGCAGGCTACAATTACTGGCGTGCTTTATCT
GCAAATGGACCTTGCAACAACCTGTCTACAAGCGCGTGCTCCTGCTCTCC
ATCCGAGTGGACACGGGTTACCACTCCGGCCTCCACCATCTCCTACTCAT
CCAGTCACACATATTCCGGAACCTACGATCGAGGCGAATCCACAACGCTT
ACCGCCGTCACCAACTACATCAATACCATGCCACCGTCTTCCTCGATCCA
GACCCTCAACATGACCCCCTCCGCATTGAATCAATGGACACGCGCTCCAG
CTCCAGCCGTCCAGTGCATTTCGTCTCTCATAACATCTCTATATAACGCG
ATCACAACCCTGACTGATATCACCGCGGACAACACCCAGCGTTACAACCA
GCCCACTGCACACGCCGTCTTCGGTACCATGCAGGCTAGCAACAGCGCCT
ACTACACCTTTATCCAGTCGGTGTCGGAGGCACGCGCCCTGGCAAACCCT
GCCCTTGCAACCGACATCCTCCTTGGTGGCTTCAACCGTCTGTATGCCGG
TCACAGCCGTGAGCTGACCTGGAAGTACAACGCGTGCATCCCATCGGAGG
CTGAATATCTTTCCGTTGTCGATGACACCACGGGATCACTATACACACTT
CTTGTCAAACTCCTTCAAGCTGAAAGCTGCTTGCCATTCCACTGCAAGCC
TGATCTTACTCCCCTCGCTACGCTGCTAGCTCGATTTGTCCATGTCAAAG
AAGACTACCTCTCGTTCCATAACCGGGAGAGCAAGATGAGTGGTTTCAGT
GATGCACGCGTCCTCTCGTACCCGGTTATTCGACTGGCTAATATCAAACC
GGACAGTCGGGCGCAGATCTCTCGATACCTTTTTGAACGCAAGGACGCAA
GCAAGAGTAGCTGCTCCTGTGCAGAGGAGAAGAAAGATCCCTGCGGCAAC
TCCGTGAACTACAGCTGCCTGGTGCTTCTGCTACGCGAGTATGGGGCACT
GAGTGCGACACGCGAACTTCTCCGTGATATAGAAGACAAGATTGAGAGGG
AGGTAATGCAGATAGAGAAGTTGACGGGAGAAGTCAACCCTTTGATACGG
AAGCTTATTGCAGGACTACGCGAGGGATTGCTGCCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004432-T1.utr5p1 | KJC3_004432-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004432-T1.utr3p1 | KJC3_004432-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008949 |
| DBxref | InterPro:IPR000092 |
| DBxref | PFAM:PF00348 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5269206..5271883 + |
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