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KJC3_004437-T1, KJC3_004437-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004437-T1
Unique NameKJC3_004437-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5285439..5286906+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004437-T1 ID=KJC3_004437-T1|Name=KJC3_004437-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1468bp|location=Sequence derived from alignment at ch3:5285439..5286906+ (Aspergillus niger KJC3)
CTCCGTCTCGCTTCAAGTGCATACCTTCCTAGTTTGGCAGGTCACATATA
GGGTGACACTCATTCATCAACACTACGGTGAATTTCGCAGACCTTGAACT
TTCTACTCTTCTCAGCTCTCTGTTGAGACCTCATCTCGCTTCTCTCAATT
ATTCAGACACTCGCCCTACATCTACTTGACGAGTTTCTGGACGAGTCCAA
GATGTCCGCTCACGGATCCTCCACCAGGGTGCCCTGCACCTACAAGGACT
GCAGCGGTGTCTTTGGTTCGGAGTGGGACATGAAGAGGCACAAGGTGAAC
GAACACGACTACTGCAAGCGTTGCGACGAAGACTTCCAGGATGATGAGTA
TCTACTGCTCCACAAGATCAAGAGTGACAAGCATATCGTGTGTGTGGTGT
GTGGGATCGATTTCCGCAGCGAGGGTGGTAGAGACCTCCACACTCGCCAG
GTTAGTATCATTCATTACCACAAATATTTACCATCCACATTATATTCAAG
CTAATACTTTTGGTGTCTATACAGCAACACCGAACTCCGCAGAGCCTGAT
CTGTTACGGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATGGTAAATC
ACGTTGAGAGCGGCGATTGCCCAAACATCCCCTTGTCTAGTCTCCTACAG
GAACAGTCAAAGAGACTCCTCTACCGGGAGACGCTCAAGACAGGAAATGA
GAATGAGAACGCTGACCCCGATTGTCCAGATGACAACGGCGGAGTCCAAA
TCGAGCAGAACCTTTTGGAGATGGACTTTGACAACGACGAGGCCACTCGA
TCTGTTGTGGACGGGGTGGGCGGTCTATCTCTTAACACCAACGTCCCAGA
ATGGAAGAGCAAGTCGTCTATGGCCTCTCCGTCTATGACGAGTGAGATGA
GAGGACGATCAGCATCGGCGGGGAAGATGCCTGCATCGGGTGCCAGGCCA
TCGAGCCCAAGCCCAAGCCCGAGCAATTCATTTGGCAATATCCGCTTCGA
TGCAGGACACACTCTGCGCATGTTGGACCAGAACTGGGACTCTACCGTAT
ACTTCAGTTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGCTGAATTC
TCCAGCATGAAGGACTTTGAGGAGCATGTGGTAACGAAGACCAACCAGAA
CAGGAGCATTCAGTAAGCGGCTGCATGCTTGCATGACTGTTTTGTCTATG
GTCTGACTCACGGCTTATTAGGTGCCCTGGATGCCTTCGCGTCTTCAAAA
CGGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAG
GTGAACAAAGGGCTCCATTTCAGCCAGGTGATCAATGACATCAGTGGAGG
GCTGGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGCGTTGAGTATGGTG
CTGGCACAATGGGTCCGAAGAAGGTGACTTATAAGAAAGACGAGGAGGGT
CCTAATCTGATGGACTGA
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Coding sequence (CDS) from alignment at ch3:5285439..5286906+

>KJC3_004437-T1 ID=KJC3_004437-T1|Name=KJC3_004437-T1|organism=Aspergillus niger KJC3|type=CDS|length=3402bp|location=Sequence derived from alignment at ch3:5285439..5286906+ (Aspergillus niger KJC3)
ATGTCCGCTCACGGATCCTCCACCAGGGTGCCCTGCACCTACAAGGACTG
CAGCGGTGTCTTTGGTTCGGAGTGGGACATGAAGAGGCACAAGGTGAACG
AACACGACTACTGCAAGCGTTGCGACGAAGACTTCCAGGATGATGAGTAT
CTACTGCTCCACAAGATCAAGAGTGACAAGCATATCGTGTGTGTGGTGTG
TGGGATCGATTTCCGCAGCGAGGGTGGTAGAGACCTCCACACTCGCCAGC
AACACCGAACTCCGCAGAGCCTGATCTGTTACGGCTGCGGGCAGAGGTTC
AGACAGGCAGGTGCCATGGTAAATCACGTTGAGAGCGGCGATTGCCCAAA
CATCCCCTTGTCTAGTCTCCTACAGGAACAGTCAAAGAGACTCCTCTACC
GGGAGACGCTCAAGACAGGAAATGAGAATGAGAACGCTGACCCCGATTGT
CCAGATGACAACGGCGGAGTCCAAATCGAGCAGAACCTTTTGGAGATGGA
CTTTGACAACGACGAGGCCACTCGATCTGTTGTGGACGGGGTGGGCGGTC
TATCTCTTAACACCAACGTCCCAGAATGGAAGAGCAAGTCGTCTATGGCC
TCTCCGTCTATGACGAGTGAGATGAGAGGACGATCAGCATCGGCGGGGAA
GATGCCTGCATCGGGTGCCAGGCCATCGAGCCCAAGCCCAAGCCCGAGCA
ATTCATTTGGCAATATCCGCTTCGATGCAGGACACACTCTGCGCATGTTG
GACCAGAACTGGGACTCTACCGTATACTTCAGTTCCTTTTCCGGAAAGTT
TATCTGTCCCTGTAAGGCTGAATTCTCCAGCATGAAGGACTTTGAGGAGC
ATGTGGTAACGAAGACCAACCAGAACAGGAGCATTCAGTGCCCTGGATGC
CTTCGCGTCTTCAAAACGGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGC
CAGTACTCGGTGCAAGGTGAACAAAGGGCTCCATTTCAGCCAGGTGATCA
ATGACATCAGTGGAGGGCTGGTCAAGTCAGTTGGTCATTTCGAGGACGGA
AGCGTTGAGTATGGTGCTGGCACAATGGGTCCGAAGAAGGTGACTTATAA
GAAAGACGAGGAGGGTCCTAATCTGATGGACTGAATGTCCGCTCACGGAT
CCTCCACCAGGGTGCCCTGCACCTACAAGGACTGCAGCGGTGTCTTTGGT
TCGGAGTGGGACATGAAGAGGCACAAGGTGAACGAACACGACTACTGCAA
GCGTTGCGACGAAGACTTCCAGGATGATGAGTATCTACTGCTCCACAAGA
TCAAGAGTGACAAGCATATCGTGTGTGTGGTGTGTGGGATCGATTTCCGC
AGCGAGGGTGGTAGAGACCTCCACACTCGCCAGCAACACCGAACTCCGCA
GAGCCTGATCTGTTACGGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCA
TGGTAAATCACGTTGAGAGCGGCGATTGCCCAAACATCCCCTTGTCTAGT
CTCCTACAGGAACAGTCAAAGAGACTCCTCTACCGGGAGACGCTCAAGAC
AGGAAATGAGAATGAGAACGCTGACCCCGATTGTCCAGATGACAACGGCG
GAGTCCAAATCGAGCAGAACCTTTTGGAGATGGACTTTGACAACGACGAG
GCCACTCGATCTGTTGTGGACGGGGTGGGCGGTCTATCTCTTAACACCAA
CGTCCCAGAATGGAAGAGCAAGTCGTCTATGGCCTCTCCGTCTATGACGA
GTGAGATGAGAGGACGATCAGCATCGGCGGGGAAGATGCCTGCATCGGGT
GCCAGGCCATCGAGCCCAAGCCCAAGCCCGAGCAATTCATTTGGCAATAT
CCGCTTCGATGCAGGACACACTCTGCGCATGTTGGACCAGAACTGGGACT
CTACCGTATACTTCAGTTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAG
GCTGAATTCTCCAGCATGAAGGACTTTGAGGAGCATGTGGTAACGAAGAC
CAACCAGAACAGGAGCATTCAGTGCCCTGGATGCCTTCGCGTCTTCAAAA
CGGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAG
GTGAACAAAGGGCTCCATTTCAGCCAGGTGATCAATGACATCAGTGGAGG
GCTGGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGCGTTGAGTATGGTG
CTGGCACAATGGGTCCGAAGAAGGTGACTTATAAGAAAGACGAGGAGGGT
CCTAATCTGATGGACTGAATGTCCGCTCACGGATCCTCCACCAGGGTGCC
CTGCACCTACAAGGACTGCAGCGGTGTCTTTGGTTCGGAGTGGGACATGA
AGAGGCACAAGGTGAACGAACACGACTACTGCAAGCGTTGCGACGAAGAC
TTCCAGGATGATGAGTATCTACTGCTCCACAAGATCAAGAGTGACAAGCA
TATCGTGTGTGTGGTGTGTGGGATCGATTTCCGCAGCGAGGGTGGTAGAG
ACCTCCACACTCGCCAGCAACACCGAACTCCGCAGAGCCTGATCTGTTAC
GGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATGGTAAATCACGTTGA
GAGCGGCGATTGCCCAAACATCCCCTTGTCTAGTCTCCTACAGGAACAGT
CAAAGAGACTCCTCTACCGGGAGACGCTCAAGACAGGAAATGAGAATGAG
AACGCTGACCCCGATTGTCCAGATGACAACGGCGGAGTCCAAATCGAGCA
GAACCTTTTGGAGATGGACTTTGACAACGACGAGGCCACTCGATCTGTTG
TGGACGGGGTGGGCGGTCTATCTCTTAACACCAACGTCCCAGAATGGAAG
AGCAAGTCGTCTATGGCCTCTCCGTCTATGACGAGTGAGATGAGAGGACG
ATCAGCATCGGCGGGGAAGATGCCTGCATCGGGTGCCAGGCCATCGAGCC
CAAGCCCAAGCCCGAGCAATTCATTTGGCAATATCCGCTTCGATGCAGGA
CACACTCTGCGCATGTTGGACCAGAACTGGGACTCTACCGTATACTTCAG
TTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGCTGAATTCTCCAGCA
TGAAGGACTTTGAGGAGCATGTGGTAACGAAGACCAACCAGAACAGGAGC
ATTCAGTGCCCTGGATGCCTTCGCGTCTTCAAAACGGCGGCTGCCCTGGT
GGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAGGTGAACAAAGGGCTCC
ATTTCAGCCAGGTGATCAATGACATCAGTGGAGGGCTGGTCAAGTCAGTT
GGTCATTTCGAGGACGGAAGCGTTGAGTATGGTGCTGGCACAATGGGTCC
GAAGAAGGTGACTTATAAGAAAGACGAGGAGGGTCCTAATCTGATGGACT
GA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004437KJC3_004437Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004437-T1.utr5p1KJC3_004437-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004437-T1.exon1KJC3_004437-T1.exon1Aspergillus niger KJC3exon
KJC3_004437-T1.exon2KJC3_004437-T1.exon2Aspergillus niger KJC3exon
KJC3_004437-T1.exon3KJC3_004437-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004437-T1.cdsKJC3_004437-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004437-T1KJC3_004437-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5285439..5286906 +
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