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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5296076..5297168- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004442-T1 ID=KJC3_004442-T1|Name=KJC3_004442-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1093bp|location=Sequence derived from alignment at ch3:5296076..5297168- (Aspergillus niger KJC3)
CCGAAAAAAACCATCAATTGAGCTTCATTAGCACCCGTCCCCAATAATTA
CCCTCACAATGACTGCCACTACACTTCCCCGGCGGGTTTTCCTCATTAGC
GTCCCGCGCTCAGCATCCCATCTTCTTCTGAAGATCGTGGACATCCACAA
CCAGCCCAAGTTCTTAACCAACGAACAAGGAGGCTACTTCTTCTTCCCAG
CCTTTGCGCCCGCCATCCACGGCGGGTATGCCGACAAGCCACTGAACGAG
TGGACAAGCGCCCAAAAGGAAGAAATAAAGGCATCATTCCATGGTTGTGT
CTCAAGTCTGGAGGAGTACTCCGAACGGGCGCAGAAAGAGGACAAAGCCA
TGTTCATCAAGGAACACGCATACTGGTTCATGAACCCGGCACTCATGTAT
GAAATGATGACGGGAAATAAAGACCCGGAGCTCTTCAAAACGTTTCAGCT
GCGCTTATCTGAGAGCTACGACCCACAGAGCTTCTCGCCCTCGAACAAGA
CTGTTCTGCCGGATGAGTACCTCCGCAGCTGGCAAGTGGCATTTATCATC
CGTCACCCGGCATTAGCATGGGCGTCGATGTATCGCGCCATGACCAAGAT
CAAGGGATTCGGAGGCATGGGCGATAAGGAGTTCATGGGGGTGTGGAAGA
CGAACACGACGCTGCGGTGGACCCGCATGGTGTATGATTGGTGTTTGGAA
CAGGGTACTCAGCCTGTTCTGGTGGATGCGGATGATGTTACTCATAATCC
GGCCGCGGTGAAGCGCTTTTGTGAGCTCACGGGATTAGATCCTGAGAAGA
TGCAGTACGAGTGGAGTGAGGAGACGGTCAAGGGGACTGGTCCGGGTATG
CATGACACTGAAAATGAGCACTATGAGATGCAGATCAAGATCAACTGTGT
CATGCGCTCTACAGTTGATGCGTCGTCGGGGATTGTCAAGGATAAGACGC
CGACGGGTCCTATTGATATTGCTGTGGAAATGGAGAAGTGGAAGGCGGAG
CTTGGGGATGAAGCTGCGCAGCTTTTGCACGAGGCTGTTTTGGAGTCCAT
GCCGGACTACGAGTGTCTCAAGGAGCGGCGGATTATTGTATAG back to topCoding sequence (CDS) from alignment at ch3:5296076..5297168- >KJC3_004442-T1 ID=KJC3_004442-T1|Name=KJC3_004442-T1|organism=Aspergillus niger KJC3|type=CDS|length=1035bp|location=Sequence derived from alignment at ch3:5296076..5297168- (Aspergillus niger KJC3)
ATGACTGCCACTACACTTCCCCGGCGGGTTTTCCTCATTAGCGTCCCGCG
CTCAGCATCCCATCTTCTTCTGAAGATCGTGGACATCCACAACCAGCCCA
AGTTCTTAACCAACGAACAAGGAGGCTACTTCTTCTTCCCAGCCTTTGCG
CCCGCCATCCACGGCGGGTATGCCGACAAGCCACTGAACGAGTGGACAAG
CGCCCAAAAGGAAGAAATAAAGGCATCATTCCATGGTTGTGTCTCAAGTC
TGGAGGAGTACTCCGAACGGGCGCAGAAAGAGGACAAAGCCATGTTCATC
AAGGAACACGCATACTGGTTCATGAACCCGGCACTCATGTATGAAATGAT
GACGGGAAATAAAGACCCGGAGCTCTTCAAAACGTTTCAGCTGCGCTTAT
CTGAGAGCTACGACCCACAGAGCTTCTCGCCCTCGAACAAGACTGTTCTG
CCGGATGAGTACCTCCGCAGCTGGCAAGTGGCATTTATCATCCGTCACCC
GGCATTAGCATGGGCGTCGATGTATCGCGCCATGACCAAGATCAAGGGAT
TCGGAGGCATGGGCGATAAGGAGTTCATGGGGGTGTGGAAGACGAACACG
ACGCTGCGGTGGACCCGCATGGTGTATGATTGGTGTTTGGAACAGGGTAC
TCAGCCTGTTCTGGTGGATGCGGATGATGTTACTCATAATCCGGCCGCGG
TGAAGCGCTTTTGTGAGCTCACGGGATTAGATCCTGAGAAGATGCAGTAC
GAGTGGAGTGAGGAGACGGTCAAGGGGACTGGTCCGGGTATGCATGACAC
TGAAAATGAGCACTATGAGATGCAGATCAAGATCAACTGTGTCATGCGCT
CTACAGTTGATGCGTCGTCGGGGATTGTCAAGGATAAGACGCCGACGGGT
CCTATTGATATTGCTGTGGAAATGGAGAAGTGGAAGGCGGAGCTTGGGGA
TGAAGCTGCGCAGCTTTTGCACGAGGCTGTTTTGGAGTCCATGCCGGACT
ACGAGTGTCTCAAGGAGCGGCGGATTATTGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004442-T1.utr5p1 | KJC3_004442-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5296076..5297168 - |
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