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KJC3_004445-T1, KJC3_004445-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004445-T1
Unique NameKJC3_004445-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5306354..5307418+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004445-T1 ID=KJC3_004445-T1|Name=KJC3_004445-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1065bp|location=Sequence derived from alignment at ch3:5306354..5307418+ (Aspergillus niger KJC3)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
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Coding sequence (CDS) from alignment at ch3:5306354..5307418+

>KJC3_004445-T1 ID=KJC3_004445-T1|Name=KJC3_004445-T1|organism=Aspergillus niger KJC3|type=CDS|length=1065bp|location=Sequence derived from alignment at ch3:5306354..5307418+ (Aspergillus niger KJC3)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005385zinc ion transmembrane transporter activity
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0071577zinc ion transmembrane transport
GO:0055085transmembrane transport
GO:0030001metal ion transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004445KJC3_004445Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004445-T1.exon1KJC3_004445-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004445-T1.cdsKJC3_004445-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004445-T1KJC3_004445-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004698
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5306354..5307418 +
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