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KJC3_004450-T1, KJC3_004450-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004450-T1
Unique NameKJC3_004450-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5313627..5316054+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004450-T1 ID=KJC3_004450-T1|Name=KJC3_004450-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2428bp|location=Sequence derived from alignment at ch3:5313627..5316054+ (Aspergillus niger KJC3)
ATGGTTACATCTACAGAGCAAACATCGCCGTCAAGGGATTCAGATCCTCA
AAGTCGATGTCGTCAATGTCTCTATGTGCGCCGTTTTAGCAATACGAAAT
GAGGGGCAAATTCGCCTCCATGAGAGATAAATAAGGCTCGACGGACCATG
GAATCAACCTTTCCATCAGCAACAACAACAACAATCTCAGAACAGCGATA
TCAATTCATCTCGAGTCTGAACCCAAACAACAAAATCCCTTCAGAATTGA
GGATTTAGTTTTGATCATGGCCCAGTCAACCATCAATATTGAGGATTCGC
ATCCTCCAAGCCTCCACATCTTCAAACAGTGGAAGGAGGTCAAAGAAAGT
CTGCCCTTCGATGACCAGCAGGACTTTGACGACGCTAGACGGGGATGGAG
AGGTCGCCTCCACCCTAACCAGGTCACCAATGACCAAGGCGTGGTGTGGG
ACAACAGTGCCTACGATTTCCTGAAGGAGGACGCTCCATTCTCAGCCAAC
CCAAGTCTGTGGCGCCAGTCGCAACTTACTCGCAAAAATGGACTGTATCA
TGTCGCCGGACCCATCTACCAAGTGCGTGGACTCGACCTCTCGAACACGA
CCATCATTGAGGGCGACGAGGGTATCATTGTCATCGATCCCCTCACTTCG
CTGGAGACCGGTGCTGCTGCACTCGCCCTCTATCAGAAACACCGTGGCAG
CAACAGAGACGTAAAGGCTGTCATTTATACGCACTCCCACGTTGACCACT
TTGGCGGGGTCAAAGGCTTCGTCAGCGAAAAGGATGTCGAGGAAAAGGAC
GTCAAAATCATTGCCCCCGAGGGTTTCCTGGAGCACGCTGTGTCCGAGAA
CGTCTACACTGGCACTTCAATGAGCCGCCGCGCCGCGTACATGTACGGTG
CTGCCCTCGAGCAGGGACCGAGAGGCCAGATCGGCGCTGGACTAGGACAG
ACAACATCGACCGGCACGGTCACCCTCATCGCACCCAACATGACCATCAA
ACGCACCGGCGAAAAGAGAACCATCGATGGCATTGAGATGGAGTTCCAAA
TGGCACCGGACACCGAGGCGCCTTCCGAAATGCTCATCTGGTTTCCTGAT
CTCAACGCACTCTGTGCTGCCGAGGATGCCACTCATACCTTCCACAACAT
CTTGACCCTGCGTGGAGCTGTGGTCCGCGACCCGCACTCTTGGGCCAAAT
ACCTGACAGAGACCATTGACCGATACGGCAGCCAAGCCGAAGTCGTCTTC
GCCCAGCACCACTGGCCGACCTGGGGCAACGATAACATCCTGAAGTTCCT
CACCTACCAGCGTGATCTGTACGCATATGTACACGACCAAACCCTTCGCC
TCCTGAACAAGGGATACAACGGCCCCGAGATCGCCGAAATGCTCACCTTG
CCCCCGGCACTCGATCAATCCTGGTATTGCCGCGGCTACTACGGCTCTCT
GAGCCACAACGTCAAGGCCATTTACCAGCGTTACGTCGGCTGGTTCGACG
GCAACCCAGCCCACCTGTGGGAACACATCCCCGTCGACAAGGCCAAGAAA
TACGTGGCCCTCATCGGCGAGGACAAGATCATCCAAGAGGGTACCAAGGC
ATACTTAGGAGGAGACTACCGCTGGGCAGCTGAGCTTCTGAGCCACGCTG
TCTTCAGCAACCCGGACAACGAGGATGCCTGCAAAAGACTGGCCGACGTG
TACGAGCAGCTCGGATACGGAGCTGAAAATGGCACCTGGAGGAACTTTTA
CATCTCCGGAACGACCGAGCTGCGCAATGGTAACTTTGGCACACCTACAC
AGACGGCTTCGGCCGATGTGGTAGGTCAGCTCACCCCGGATATGGTCCTT
GATACTCTTGCTATCCAGATCAATGGGCCCGAGGCGTGGGATAAGAAGGT
GCTTATGGATCTTGTTGTTTCGGATCAAGATAATAAAACTTACCATGCTT
GGCTGTCTAATGGGGCGCTTGTCTACAGCACCGCAGACCAGTCAGACGCT
GCTCAGGTCACTCTGACTGGTACGGCTAAGCAGTTGACTGCGCTGGCTGT
GTATGGACCTGATCCTGATGCTTTGGCGAATGCCGGTATTGTAATCGATG
GGGATACTACTGCGCTGGATACGCTTGCGTCGTTGCTGGATCCGGGTGAT
CCTAACTTCAATATTGTTACGCCTTAGTTTGTGTAATTAGCTTACAGTGG
GCTGGTCAAGAAAAACCATCCCGTCATTGTCATAGTAGTTTCAGTCAACT
AAGTTCTTAGCTTCTTGGATTTATAAAGTGCTTAGAACAAGCCGATTCTA
TTAGTATTGTCTAGGATCGATTGTGTCCAAGGACCTAGATATGGTGGAAA
TGTCGACTTCATAATGGGCATAATACATAATCTTAAGAATGGTCGCAAAT
ACTCTTCATTCCTGCCATCTGTGACCGT
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Coding sequence (CDS) from alignment at ch3:5313627..5316054+

>KJC3_004450-T1 ID=KJC3_004450-T1|Name=KJC3_004450-T1|organism=Aspergillus niger KJC3|type=CDS|length=1911bp|location=Sequence derived from alignment at ch3:5313627..5316054+ (Aspergillus niger KJC3)
ATGGCCCAGTCAACCATCAATATTGAGGATTCGCATCCTCCAAGCCTCCA
CATCTTCAAACAGTGGAAGGAGGTCAAAGAAAGTCTGCCCTTCGATGACC
AGCAGGACTTTGACGACGCTAGACGGGGATGGAGAGGTCGCCTCCACCCT
AACCAGGTCACCAATGACCAAGGCGTGGTGTGGGACAACAGTGCCTACGA
TTTCCTGAAGGAGGACGCTCCATTCTCAGCCAACCCAAGTCTGTGGCGCC
AGTCGCAACTTACTCGCAAAAATGGACTGTATCATGTCGCCGGACCCATC
TACCAAGTGCGTGGACTCGACCTCTCGAACACGACCATCATTGAGGGCGA
CGAGGGTATCATTGTCATCGATCCCCTCACTTCGCTGGAGACCGGTGCTG
CTGCACTCGCCCTCTATCAGAAACACCGTGGCAGCAACAGAGACGTAAAG
GCTGTCATTTATACGCACTCCCACGTTGACCACTTTGGCGGGGTCAAAGG
CTTCGTCAGCGAAAAGGATGTCGAGGAAAAGGACGTCAAAATCATTGCCC
CCGAGGGTTTCCTGGAGCACGCTGTGTCCGAGAACGTCTACACTGGCACT
TCAATGAGCCGCCGCGCCGCGTACATGTACGGTGCTGCCCTCGAGCAGGG
ACCGAGAGGCCAGATCGGCGCTGGACTAGGACAGACAACATCGACCGGCA
CGGTCACCCTCATCGCACCCAACATGACCATCAAACGCACCGGCGAAAAG
AGAACCATCGATGGCATTGAGATGGAGTTCCAAATGGCACCGGACACCGA
GGCGCCTTCCGAAATGCTCATCTGGTTTCCTGATCTCAACGCACTCTGTG
CTGCCGAGGATGCCACTCATACCTTCCACAACATCTTGACCCTGCGTGGA
GCTGTGGTCCGCGACCCGCACTCTTGGGCCAAATACCTGACAGAGACCAT
TGACCGATACGGCAGCCAAGCCGAAGTCGTCTTCGCCCAGCACCACTGGC
CGACCTGGGGCAACGATAACATCCTGAAGTTCCTCACCTACCAGCGTGAT
CTGTACGCATATGTACACGACCAAACCCTTCGCCTCCTGAACAAGGGATA
CAACGGCCCCGAGATCGCCGAAATGCTCACCTTGCCCCCGGCACTCGATC
AATCCTGGTATTGCCGCGGCTACTACGGCTCTCTGAGCCACAACGTCAAG
GCCATTTACCAGCGTTACGTCGGCTGGTTCGACGGCAACCCAGCCCACCT
GTGGGAACACATCCCCGTCGACAAGGCCAAGAAATACGTGGCCCTCATCG
GCGAGGACAAGATCATCCAAGAGGGTACCAAGGCATACTTAGGAGGAGAC
TACCGCTGGGCAGCTGAGCTTCTGAGCCACGCTGTCTTCAGCAACCCGGA
CAACGAGGATGCCTGCAAAAGACTGGCCGACGTGTACGAGCAGCTCGGAT
ACGGAGCTGAAAATGGCACCTGGAGGAACTTTTACATCTCCGGAACGACC
GAGCTGCGCAATGGTAACTTTGGCACACCTACACAGACGGCTTCGGCCGA
TGTGGTAGGTCAGCTCACCCCGGATATGGTCCTTGATACTCTTGCTATCC
AGATCAATGGGCCCGAGGCGTGGGATAAGAAGGTGCTTATGGATCTTGTT
GTTTCGGATCAAGATAATAAAACTTACCATGCTTGGCTGTCTAATGGGGC
GCTTGTCTACAGCACCGCAGACCAGTCAGACGCTGCTCAGGTCACTCTGA
CTGGTACGGCTAAGCAGTTGACTGCGCTGGCTGTGTATGGACCTGATCCT
GATGCTTTGGCGAATGCCGGTATTGTAATCGATGGGGATACTACTGCGCT
GGATACGCTTGCGTCGTTGCTGGATCCGGGTGATCCTAACTTCAATATTG
TTACGCCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004450KJC3_004450Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004450-T1.utr5p1KJC3_004450-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004450-T1.exon1KJC3_004450-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004450-T1.cdsKJC3_004450-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004450-T1.utr3p1KJC3_004450-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004450-T1KJC3_004450-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036866
DBxrefInterPro:IPR036527
DBxrefInterPro:IPR029229
DBxrefInterPro:IPR038536
DBxrefInterPro:IPR029228
DBxrefInterPro:IPR001279
DBxrefPFAM:PF00753
DBxrefPFAM:PF14863
DBxrefPFAM:PF14864
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5313627..5316054 +
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