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KJC3_004460-T1, KJC3_004460-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004460-T1
Unique NameKJC3_004460-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5339706..5341529-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004460-T1 ID=KJC3_004460-T1|Name=KJC3_004460-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1824bp|location=Sequence derived from alignment at ch3:5339706..5341529- (Aspergillus niger KJC3)
AATCTAATTTCTTTTGTCTCCAGGCTAATCATTTTCAATTCTACTGGCAG
CTCGACCTATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACACCC
CCAGCATCCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGGATG
TCGTACCTGTCGGTGAGTTCAGCCTGCACGACACTACCATAGATACTCTG
CTAACAAACCCGCGCTCTTTAGTGCCCGCCATAAGAAATGCGATGAAACC
CCAGGCGCCTGCATCAATTGTACATCTACGGGTCGAACCTGCGATGGATA
TGAGCTCCACCGCTTACCCCGCGAGGTGAGGAGACCCGGAAAAGCAGTGG
TGGGGATAACAGTGCCCGCCTCACTCGCGAATGGGATCCACTGGGTGATG
AATTCCGACGAGCAACGAGCGTTCGCCTATTTCCAGCATCGATCCATGCC
CGCGTTTTTAGGATGGTTTGACTCGTCGCTATGGCAGAAACTGGTCCTCC
AGTTGAGTCATGCAGAGCCCGCTGTATACCACGCAGCTATCGCATTGAGC
GCCATCCACCAGGATGCCGAGAAGAAAGGCATGCCGCTTGCTAGGGAGGA
CTTGGACAATACTTGGCATCGCTTCGCTTTGGAACAGGCGGGACGCTCCA
TCGTCTTGCTCAATGCGCGACGGACATCGCAGGATCCCCGTCTGAGAGAG
GTCACTCTGCTGTGCTGCTTGCTTTTCACGTTGTCTGAATTGCTGCGCGG
TCGGTACGATAACGCTTTTAGACATCTGCATGGTGGTATACACATCTTGA
AAAATCTAGGCGCCCATAGACAGCTTGATTCGGTGGCAATGTCTAAGCCT
CCGGTCGAGTGGTGTCTTGTCGAGGCATTTGCGCACTTGGACGTCCAGTC
TACCCAGTTCGGCGTAGGAGGACCGATCTGGTTTACCGGTAAGCAGGACC
ATATCCAGCTAGGGAATGGGAAGTCCTCCGTTTTTCATTTTCATACTCTT
GCAGAGGCGCGTCGAGCTTTCGATCGCGTGATGGGCACTGTTCTTGAGTT
CACAGCAAAGGCATGGGGCTCAACCCACAGTCAGATCGCATCGGACTACG
AAACACTATACAAGGAGCAGCTCGAACTCTGTCTACAGATAGACACATTT
GCACGAGCATTCGATACATTTCGAACCGACGCATACCCTCAGATGAGCCC
GAAAGAGCGACGAGGAGCCGACGTTGTCCACCTTCACCAGCGAGCCGCAA
CCCTCACCCTCCAAACCTGCCTTTTAGACGGAAACGAGCCGGTACTTGAT
CAGTACACGCCCGAATTCGAAAATATCCTATCTTTAGCGGCTGCAATCAT
GCACACATTCCCAGAGCGCCCGAGTGTTTGCTTTGACATGGGCATCATTC
CACCTCTGACTCTCGTGGCGACAGGCTGCCGTGATTACAATGTTCGGTGG
CGCGCAATTGAGATGCTTTGTTCTTGGCCTCATCGCGAGGGGACCTGGGA
TTCCAACTTGTGTGCGCAGCTGGCGGTTCATACTATGAAAGTGGAGGCAT
TGAATAAATTCAATGTGGATGCGAGTGGAACACCGGCCGATGTTCACAAT
GAGCCATCCTTGCGAGGTATATTCATGACAGTCGAAGAGGATCAGCGCCA
GGCGCGTATTTCGTACTTTCTTGGAGATGTAAAGCACGAACTCCGGGTTA
TGCTGGAGGAGGATATACATCCCTTTTAGTGGATCTGTTACGCCAGGGTC
GCCTATCCTGTGGTCGTCGGTCCTTGATCACAATGCGCGAAAAGAAGAAT
AATTGATATTGCGAGACGAGAGAT
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Coding sequence (CDS) from alignment at ch3:5339706..5341529-

>KJC3_004460-T1 ID=KJC3_004460-T1|Name=KJC3_004460-T1|organism=Aspergillus niger KJC3|type=CDS|length=3222bp|location=Sequence derived from alignment at ch3:5339706..5341529- (Aspergillus niger KJC3)
TGCCCGCCATAAGAAATGCGATGAAACCCCAGGCGCCTGCATCAATTGTA
CATCTACGGGTCGAACCTGCGATGGATATGAGCTCCACCGCTTACCCCGC
GAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGATAACAGTGCCCGCCTC
ACTCGCGAATGGGATCCACTGGGTGATGAATTCCGACGAGCAACGAGCGT
TCGCCTATTTCCAGCATCGATCCATGCCCGCGTTTTTAGGATGGTTTGAC
TCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAGTCATGCAGAGCCCGC
TGTATACCACGCAGCTATCGCATTGAGCGCCATCCACCAGGATGCCGAGA
AGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGACAATACTTGGCATCGC
TTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTTGCTCAATGCGCGACG
GACATCGCAGGATCCCCGTCTGAGAGAGGTCACTCTGCTGTGCTGCTTGC
TTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTACGATAACGCTTTTAGA
CATCTGCATGGTGGTATACACATCTTGAAAAATCTAGGCGCCCATAGACA
GCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCGAGTGGTGTCTTGTCG
AGGCATTTGCGCACTTGGACGTCCAGTCTACCCAGTTCGGCGTAGGAGGA
CCGATCTGGTTTACCGGTAAGCAGGACCATATCCAGCTAGGGAATGGGAA
GTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGGCGCGTCGAGCTTTCG
ATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCAAAGGCATGGGGCTCA
ACCCACAGTCAGATCGCATCGGACTACGAAACACTATACAAGGAGCAGCT
CGAACTCTGTCTACAGATAGACACATTTGCACGAGCATTCGATACATTTC
GAACCGACGCATACCCTCAGATGAGCCCGAAAGAGCGACGAGGAGCCGAC
GTTGTCCACCTTCACCAGCGAGCCGCAACCCTCACCCTCCAAACCTGCCT
TTTAGACGGAAACGAGCCGGTACTTGATCAGTACACGCCCGAATTCGAAA
ATATCCTATCTTTAGCGGCTGCAATCATGCACACATTCCCAGAGCGCCCG
AGTGTTTGCTTTGACATGGGCATCATTCCACCTCTGACTCTCGTGGCGAC
AGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAATTGAGATGCTTTGTT
CTTGGCCTCATCGCGAGGGGACCTGGGATTCCAACTTGTGTGCGCAGCTG
GCGGTTCATACTATGAAAGTGGAGGCATTGAATAAATTCAATGTGGATGC
GAGTGGAACACCGGCCGATGTTCACAATGAGCCATCCTTGCGAGGTATAT
TCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGTATTTCGTACTTTCTT
GGAGATGTAAAGCACGAACTCCGGGTTATGCTGGAGGAGGATATACATCC
CTTTTAGATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACACCCC
CAGCATCCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGGATGT
CGTACCTGTCGTGCCCGCCATAAGAAATGCGATGAAACCCCAGGCGCCTG
CATCAATTGTACATCTACGGGTCGAACCTGCGATGGATATGAGCTCCACC
GCTTACCCCGCGAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGATAACA
GTGCCCGCCTCACTCGCGAATGGGATCCACTGGGTGATGAATTCCGACGA
GCAACGAGCGTTCGCCTATTTCCAGCATCGATCCATGCCCGCGTTTTTAG
GATGGTTTGACTCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAGTCAT
GCAGAGCCCGCTGTATACCACGCAGCTATCGCATTGAGCGCCATCCACCA
GGATGCCGAGAAGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGACAATA
CTTGGCATCGCTTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTTGCTC
AATGCGCGACGGACATCGCAGGATCCCCGTCTGAGAGAGGTCACTCTGCT
GTGCTGCTTGCTTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTACGATA
ACGCTTTTAGACATCTGCATGGTGGTATACACATCTTGAAAAATCTAGGC
GCCCATAGACAGCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCGAGTG
GTGTCTTGTCGAGGCATTTGCGCACTTGGACGTCCAGTCTACCCAGTTCG
GCGTAGGAGGACCGATCTGGTTTACCGGTAAGCAGGACCATATCCAGCTA
GGGAATGGGAAGTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGGCGCG
TCGAGCTTTCGATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCAAAGG
CATGGGGCTCAACCCACAGTCAGATCGCATCGGACTACGAAACACTATAC
AAGGAGCAGCTCGAACTCTGTCTACAGATAGACACATTTGCACGAGCATT
CGATACATTTCGAACCGACGCATACCCTCAGATGAGCCCGAAAGAGCGAC
GAGGAGCCGACGTTGTCCACCTTCACCAGCGAGCCGCAACCCTCACCCTC
CAAACCTGCCTTTTAGACGGAAACGAGCCGGTACTTGATCAGTACACGCC
CGAATTCGAAAATATCCTATCTTTAGCGGCTGCAATCATGCACACATTCC
CAGAGCGCCCGAGTGTTTGCTTTGACATGGGCATCATTCCACCTCTGACT
CTCGTGGCGACAGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAATTGA
GATGCTTTGTTCTTGGCCTCATCGCGAGGGGACCTGGGATTCCAACTTGT
GTGCGCAGCTGGCGGTTCATACTATGAAAGTGGAGGCATTGAATAAATTC
AATGTGGATGCGAGTGGAACACCGGCCGATGTTCACAATGAGCCATCCTT
GCGAGGTATATTCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGTATTT
CGTACTTTCTTGGAGATGTAAAGCACGAACTCCGGGTTATGCTGGAGGAG
GATATACATCCCTTTTAGATGCTCCTCGACACTCCGGGATCATCCGAAAT
CACAACACCCCCAGCATCCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCA
AGACTGGATGTCGTACCTGTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004460KJC3_004460Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004460-T1KJC3_004460-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004460-T1.cdsKJC3_004460-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004460-T1.utr3p1KJC3_004460-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004460-T1.exon2KJC3_004460-T1.exon2Aspergillus niger KJC3exon
KJC3_004460-T1.exon1KJC3_004460-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004460-T1.utr5p1KJC3_004460-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5339706..5341529 -
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