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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5394062..5395519+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004479-T1 ID=KJC3_004479-T1|Name=KJC3_004479-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1458bp|location=Sequence derived from alignment at ch3:5394062..5395519+ (Aspergillus niger KJC3)
ATGGGTTACGGCGACGAAATCGCCGGCATGGACAACAAGTCCCAGAATGT
CATGGGGGGTGAGAAGTACGATGGTGACTTGGTGGAGAAGATGAGCGAGG
GCGAGCGGAACATCTACGAGGCCGGTATCGAAAAGTACAACCGTCTGGGA
TGGAAGCGCCTGACGGTTGTGCTGATCGTCGAGGCCATTGCGCTGGGTAG
TTTGTCCATTCCCGGCAGTTTCGCTACCCTTGGTATGGTTGCCGGTGTCA
TCTTGACCGTGGGTCTGGGTTTTGTCGCCATCTACACCAGTTACGTGGTC
GGTCAGGTCAAGCTGAAGTTCCCCGACGTCGCCCACTACCCCGAGGCGGG
ACGGCTGATGTTCGGTCGGGTTGGTTACGAGATTGTCTACGTGATGCTGG
GTCTGCAATTGCTCTTCCTGACGGGCTCCCACTGCTTGACGGGTACCATC
GCCTTCATTAACATTACCGAAAGCGGCGTCTGCTCCGTCGTGTTCGCCGT
CGTCTCCGCCATCATCCTGCTGCTCTTCGCCATCCCTCCCAGTTTCGCTG
AGATGGCTATTCTGGGCTACGTCGACTTTGTCTCCATCATCGCCGCTATC
CTGATCACCATGATTGCCACGGGAATCACGGCTTCCGACAGCACGGCGGG
TCTGTCCGGGGTGAACTGGTCCGCTTGGCCCAAGGAGGGCATCACCTTCA
CGGACGCCTTCATTGCCGTCACCAACATTGTCTTCGCCTACAGTTTCGCC
ATGTGCCAGTTCTCGTTCATGGATGAGATGCACACCCCCAAGGACTACGT
CAAATCCATCTGGGCGCTGGGTCTCATTGAAATCGTCATCTACACGCTGA
CGGGTGCGCTGATCTACGCCTTTGTTGGTCAGGATGTGCAGAGCCCCGCC
TTGCTGTCCGCCGGGAGCATGGTGAAGCGTGTGGCGTTTGGGATTGCGCT
GCCCGTCATCTTCATCAGTGGTTCGATCAACACGGTGGTGCTGGGCCGCA
TGATCCATGGGCGCATCTTCAAGAACTCGACCATTCGCTTCATCAACACC
AAGATGGGCTGGATCACCTGGCTGGCCCTGATCACCGTCATCACCTGGGT
GGCATTTGTGATCGCCGAGGTCATTCCCTTCTTCTCGGATCTGCTGTCCA
TCTCCTCTTCGCTCTTCATCTCGGGCTTCACCTTCTACTTCCCCGCGCTG
ATGTGGTTCTTGCTGGTGCGCGAGGGCAAGTGGAACACGCCCAAGAACCT
GATGCTGGGGGCACTGAACCTGTGCTGCCTGATTATTGGTCTGGTGACGC
TGGGGGCTGGTACCTATGCCAGTGTCGACGACATTGTAAGACCATCCTAT
CTTCAATTCATCTCGATGATTATGATGCTAATATTCTTATTTTTCTAGAT
TCTCAACTACCGCAACGGTTCCGTGCGTGGTGTGTTCACCTGCGCTGCTC
CGGAGTAG back to topCoding sequence (CDS) from alignment at ch3:5394062..5395519+ >KJC3_004479-T1 ID=KJC3_004479-T1|Name=KJC3_004479-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch3:5394062..5395519+ (Aspergillus niger KJC3)
ATGGGTTACGGCGACGAAATCGCCGGCATGGACAACAAGTCCCAGAATGT
CATGGGGGGTGAGAAGTACGATGGTGACTTGGTGGAGAAGATGAGCGAGG
GCGAGCGGAACATCTACGAGGCCGGTATCGAAAAGTACAACCGTCTGGGA
TGGAAGCGCCTGACGGTTGTGCTGATCGTCGAGGCCATTGCGCTGGGTAG
TTTGTCCATTCCCGGCAGTTTCGCTACCCTTGGTATGGTTGCCGGTGTCA
TCTTGACCGTGGGTCTGGGTTTTGTCGCCATCTACACCAGTTACGTGGTC
GGTCAGGTCAAGCTGAAGTTCCCCGACGTCGCCCACTACCCCGAGGCGGG
ACGGCTGATGTTCGGTCGGGTTGGTTACGAGATTGTCTACGTGATGCTGG
GTCTGCAATTGCTCTTCCTGACGGGCTCCCACTGCTTGACGGGTACCATC
GCCTTCATTAACATTACCGAAAGCGGCGTCTGCTCCGTCGTGTTCGCCGT
CGTCTCCGCCATCATCCTGCTGCTCTTCGCCATCCCTCCCAGTTTCGCTG
AGATGGCTATTCTGGGCTACGTCGACTTTGTCTCCATCATCGCCGCTATC
CTGATCACCATGATTGCCACGGGAATCACGGCTTCCGACAGCACGGCGGG
TCTGTCCGGGGTGAACTGGTCCGCTTGGCCCAAGGAGGGCATCACCTTCA
CGGACGCCTTCATTGCCGTCACCAACATTGTCTTCGCCTACAGTTTCGCC
ATGTGCCAGTTCTCGTTCATGGATGAGATGCACACCCCCAAGGACTACGT
CAAATCCATCTGGGCGCTGGGTCTCATTGAAATCGTCATCTACACGCTGA
CGGGTGCGCTGATCTACGCCTTTGTTGGTCAGGATGTGCAGAGCCCCGCC
TTGCTGTCCGCCGGGAGCATGGTGAAGCGTGTGGCGTTTGGGATTGCGCT
GCCCGTCATCTTCATCAGTGGTTCGATCAACACGGTGGTGCTGGGCCGCA
TGATCCATGGGCGCATCTTCAAGAACTCGACCATTCGCTTCATCAACACC
AAGATGGGCTGGATCACCTGGCTGGCCCTGATCACCGTCATCACCTGGGT
GGCATTTGTGATCGCCGAGGTCATTCCCTTCTTCTCGGATCTGCTGTCCA
TCTCCTCTTCGCTCTTCATCTCGGGCTTCACCTTCTACTTCCCCGCGCTG
ATGTGGTTCTTGCTGGTGCGCGAGGGCAAGTGGAACACGCCCAAGAACCT
GATGCTGGGGGCACTGAACCTGTGCTGCCTGATTATTGGTCTGGTGACGC
TGGGGGCTGGTACCTATGCCAGTGTCGACGACATTATTCTCAACTACCGC
AACGGTTCCGTGCGTGGTGTGTTCACCTGCGCTGCTCCGGAGTAGATGGG
TTACGGCGACGAAATCGCCGGCATGGACAACAAGTCCCAGAATGTCATGG
GGGGTGAGAAGTACGATGGTGACTTGGTGGAGAAGATGAGCGAGGGCGAG
CGGAACATCTACGAGGCCGGTATCGAAAAGTACAACCGTCTGGGATGGAA
GCGCCTGACGGTTGTGCTGATCGTCGAGGCCATTGCGCTGGGTAGTTTGT
CCATTCCCGGCAGTTTCGCTACCCTTGGTATGGTTGCCGGTGTCATCTTG
ACCGTGGGTCTGGGTTTTGTCGCCATCTACACCAGTTACGTGGTCGGTCA
GGTCAAGCTGAAGTTCCCCGACGTCGCCCACTACCCCGAGGCGGGACGGC
TGATGTTCGGTCGGGTTGGTTACGAGATTGTCTACGTGATGCTGGGTCTG
CAATTGCTCTTCCTGACGGGCTCCCACTGCTTGACGGGTACCATCGCCTT
CATTAACATTACCGAAAGCGGCGTCTGCTCCGTCGTGTTCGCCGTCGTCT
CCGCCATCATCCTGCTGCTCTTCGCCATCCCTCCCAGTTTCGCTGAGATG
GCTATTCTGGGCTACGTCGACTTTGTCTCCATCATCGCCGCTATCCTGAT
CACCATGATTGCCACGGGAATCACGGCTTCCGACAGCACGGCGGGTCTGT
CCGGGGTGAACTGGTCCGCTTGGCCCAAGGAGGGCATCACCTTCACGGAC
GCCTTCATTGCCGTCACCAACATTGTCTTCGCCTACAGTTTCGCCATGTG
CCAGTTCTCGTTCATGGATGAGATGCACACCCCCAAGGACTACGTCAAAT
CCATCTGGGCGCTGGGTCTCATTGAAATCGTCATCTACACGCTGACGGGT
GCGCTGATCTACGCCTTTGTTGGTCAGGATGTGCAGAGCCCCGCCTTGCT
GTCCGCCGGGAGCATGGTGAAGCGTGTGGCGTTTGGGATTGCGCTGCCCG
TCATCTTCATCAGTGGTTCGATCAACACGGTGGTGCTGGGCCGCATGATC
CATGGGCGCATCTTCAAGAACTCGACCATTCGCTTCATCAACACCAAGAT
GGGCTGGATCACCTGGCTGGCCCTGATCACCGTCATCACCTGGGTGGCAT
TTGTGATCGCCGAGGTCATTCCCTTCTTCTCGGATCTGCTGTCCATCTCC
TCTTCGCTCTTCATCTCGGGCTTCACCTTCTACTTCCCCGCGCTGATGTG
GTTCTTGCTGGTGCGCGAGGGCAAGTGGAACACGCCCAAGAACCTGATGC
TGGGGGCACTGAACCTGTGCTGCCTGATTATTGGTCTGGTGACGCTGGGG
GCTGGTACCTATGCCAGTGTCGACGACATTATTCTCAACTACCGCAACGG
TTCCGTGCGTGGTGTGTTCACCTGCGCTGCTCCGGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.9 |
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5394062..5395519 + |
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