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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5397146..5397706+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004480-T1 ID=KJC3_004480-T1|Name=KJC3_004480-T1|organism=Aspergillus niger KJC3|type=mRNA|length=561bp|location=Sequence derived from alignment at ch3:5397146..5397706+ (Aspergillus niger KJC3)
ATGAAATTCACTGTCGCCGCTGTCGCTGCCTTCGCTGCTGGAGCACTGGC
TCAGAATGTCCAGATCGCCTCCCCCAAGGCCGGCCAGACGGTCCAGGCGG
GACAGAAGGTGATTGTTCAGATTGAGCGTCCCGTAAGTCCTGCGTCGTTG
TTACTCTCTCAACAAACCCGAATGACATGAAATGCGTCGTTTCACTAACC
AAGATGTTTTGCGAATAGACTCCCCCCACCAACGTCGAGGAAATGGCCAT
CGCCATCGGCCTGCAGTCCTGCGCCTCGGCTACCTGCTACCCGGCCTCGG
AAGTCCTGGGCCACGTCCTGTACAATGGCGCGTTTGACCCCGAGTACCAC
GAGTGGTACTTGCCCCAGTATCAGAACTTCACCGTGACCATTCCCGAGGG
CACGGCTTCGGGCAAGGCGGTGCTGGGTGTTGCTCATGCTTCCCTGATTG
GAGTAAGTTGATCGCCATTTCAACCGGTGAACCTCTGCTGATTTGCTTGT
GCTCTAGGCTTCGTTTGAGCCCTATCTCCAGACCCTGAGTCAGAACATCA
CGATCGCATAG back to topCoding sequence (CDS) from alignment at ch3:5397146..5397706+ >KJC3_004480-T1 ID=KJC3_004480-T1|Name=KJC3_004480-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch3:5397146..5397706+ (Aspergillus niger KJC3)
ATGAAATTCACTGTCGCCGCTGTCGCTGCCTTCGCTGCTGGAGCACTGGC
TCAGAATGTCCAGATCGCCTCCCCCAAGGCCGGCCAGACGGTCCAGGCGG
GACAGAAGGTGATTGTTCAGATTGAGCGTCCCACTCCCCCCACCAACGTC
GAGGAAATGGCCATCGCCATCGGCCTGCAGTCCTGCGCCTCGGCTACCTG
CTACCCGGCCTCGGAAGTCCTGGGCCACGTCCTGTACAATGGCGCGTTTG
ACCCCGAGTACCACGAGTGGTACTTGCCCCAGTATCAGAACTTCACCGTG
ACCATTCCCGAGGGCACGGCTTCGGGCAAGGCGGTGCTGGGTGTTGCTCA
TGCTTCCCTGATTGGAGCTTCGTTTGAGCCCTATCTCCAGACCCTGAGTC
AGAACATCACGATCGCATAGATGAAATTCACTGTCGCCGCTGTCGCTGCC
TTCGCTGCTGGAGCACTGGCTCAGAATGTCCAGATCGCCTCCCCCAAGGC
CGGCCAGACGGTCCAGGCGGGACAGAAGGTGATTGTTCAGATTGAGCGTC
CCACTCCCCCCACCAACGTCGAGGAAATGGCCATCGCCATCGGCCTGCAG
TCCTGCGCCTCGGCTACCTGCTACCCGGCCTCGGAAGTCCTGGGCCACGT
CCTGTACAATGGCGCGTTTGACCCCGAGTACCACGAGTGGTACTTGCCCC
AGTATCAGAACTTCACCGTGACCATTCCCGAGGGCACGGCTTCGGGCAAG
GCGGTGCTGGGTGTTGCTCATGCTTCCCTGATTGGAGCTTCGTTTGAGCC
CTATCTCCAGACCCTGAGTCAGAACATCACGATCGCATAGATGAAATTCA
CTGTCGCCGCTGTCGCTGCCTTCGCTGCTGGAGCACTGGCTCAGAATGTC
CAGATCGCCTCCCCCAAGGCCGGCCAGACGGTCCAGGCGGGACAGAAGGT
GATTGTTCAGATTGAGCGTCCCACTCCCCCCACCAACGTCGAGGAAATGG
CCATCGCCATCGGCCTGCAGTCCTGCGCCTCGGCTACCTGCTACCCGGCC
TCGGAAGTCCTGGGCCACGTCCTGTACAATGGCGCGTTTGACCCCGAGTA
CCACGAGTGGTACTTGCCCCAGTATCAGAACTTCACCGTGACCATTCCCG
AGGGCACGGCTTCGGGCAAGGCGGTGCTGGGTGTTGCTCATGCTTCCCTG
ATTGGAGCTTCGTTTGAGCCCTATCTCCAGACCCTGAGTCAGAACATCAC
GATCGCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.9 |
| Note | SECRETED:SignalP(1-17) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5397146..5397706 + |
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