You are here

Home

KJC3_004485-T1, KJC3_004485-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004485-T1
Unique NameKJC3_004485-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5407372..5407845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004485-T1 ID=KJC3_004485-T1|Name=KJC3_004485-T1|organism=Aspergillus niger KJC3|type=mRNA|length=474bp|location=Sequence derived from alignment at ch3:5407372..5407845+ (Aspergillus niger KJC3)
ATGCAGTTGAAGTCCATCATTCTCGCTCTGGCTTTCAGTGCCTTTGCTCA
GGCTCAGACTATTCATGGCTACACCAAAAAGGATTGTAGCGACGACGCTA
CAGATGCTTCCGATCAGACAACCCTGAACAAATGTTTGACTTTGACCGGT
AACAGTTTCAAGGCTCTCAAGGGCAGCCCTGGTGACTATGTCCTTACGGC
ATTTGCGGAAACGAGTTGTAATGGCAACGGCTATGCCCTGCCGCCCGGCA
AGTGTATCAACGGCGACAAGTTCACGACCTACGAGGTATGTGCCTTGAGG
AGGATCTGATACGGGTTACTCTGGGGTTGCTAACAGAACCGAACTATTTA
GATCCAATTCATCCCCATCGCCAAGCGAAGCAACGCAACGGCCTTGCTGG
AGTTGTACGCCGACTACTACGCCGAATTCCCCGAGGAGGCCGAGGAGCTT
AAACGCCAGCTGAACGAAGCGTAG
back to top

Coding sequence (CDS) from alignment at ch3:5407372..5407845+

>KJC3_004485-T1 ID=KJC3_004485-T1|Name=KJC3_004485-T1|organism=Aspergillus niger KJC3|type=CDS|length=816bp|location=Sequence derived from alignment at ch3:5407372..5407845+ (Aspergillus niger KJC3)
ATGCAGTTGAAGTCCATCATTCTCGCTCTGGCTTTCAGTGCCTTTGCTCA
GGCTCAGACTATTCATGGCTACACCAAAAAGGATTGTAGCGACGACGCTA
CAGATGCTTCCGATCAGACAACCCTGAACAAATGTTTGACTTTGACCGGT
AACAGTTTCAAGGCTCTCAAGGGCAGCCCTGGTGACTATGTCCTTACGGC
ATTTGCGGAAACGAGTTGTAATGGCAACGGCTATGCCCTGCCGCCCGGCA
AGTGTATCAACGGCGACAAGTTCACGACCTACGAGATCCAATTCATCCCC
ATCGCCAAGCGAAGCAACGCAACGGCCTTGCTGGAGTTGTACGCCGACTA
CTACGCCGAATTCCCCGAGGAGGCCGAGGAGCTTAAACGCCAGCTGAACG
AAGCGTAGATGCAGTTGAAGTCCATCATTCTCGCTCTGGCTTTCAGTGCC
TTTGCTCAGGCTCAGACTATTCATGGCTACACCAAAAAGGATTGTAGCGA
CGACGCTACAGATGCTTCCGATCAGACAACCCTGAACAAATGTTTGACTT
TGACCGGTAACAGTTTCAAGGCTCTCAAGGGCAGCCCTGGTGACTATGTC
CTTACGGCATTTGCGGAAACGAGTTGTAATGGCAACGGCTATGCCCTGCC
GCCCGGCAAGTGTATCAACGGCGACAAGTTCACGACCTACGAGATCCAAT
TCATCCCCATCGCCAAGCGAAGCAACGCAACGGCCTTGCTGGAGTTGTAC
GCCGACTACTACGCCGAATTCCCCGAGGAGGCCGAGGAGCTTAAACGCCA
GCTGAACGAAGCGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004485KJC3_004485Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004485-T1.exon1KJC3_004485-T1.exon1Aspergillus niger KJC3exon
KJC3_004485-T1.exon2KJC3_004485-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004485-T1.cdsKJC3_004485-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004485-T1KJC3_004485-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.9
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5407372..5407845 +
Powered by Drupal